RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 LINC00479Q96M42 142 aa5.83□□□□□ -1.48
COL17A1-204ENST00000433822 C8orf49Q96NF6 230 aa5.83□□□□□ -1.48
COL17A1-204ENST00000433822 NEU1Q99519 415 aa5.83□□□□□ -1.48
COL17A1-204ENST00000433822 SAMD10Q9BYL1 202 aa5.83□□□□□ -1.48
COL17A1-204ENST00000433822 LPAR2Q9HBW0 351 aa5.83□□□□□ -1.48
COL17A1-204ENST00000433822 SERTAD4Q9NUC0 356 aa5.83□□□□□ -1.48
COL17A1-204ENST00000433822 JMJD1CQ15652 2540 aa5.83□□□□□ -1.48
COL17A1-204ENST00000433822 CSPG4Q6UVK1 2322 aa5.82□□□□□ -1.48
COL17A1-204ENST00000433822 A0A1W2PS18 150 aa5.82□□□□□ -1.48
COL17A1-204ENST00000433822 M0QZK8 103 aa5.82□□□□□ -1.48
COL17A1-204ENST00000433822 FAM106CPP0CH98 169 aa5.82□□□□□ -1.48
COL17A1-204ENST00000433822 RPL7P18124 248 aaKnown RBP5.82□□□□□ -1.48
COL17A1-204ENST00000433822 SRIP30626 198 aa5.82□□□□□ -1.48
COL17A1-204ENST00000433822 CRIP2P52943 208 aaPredicted RBP5.82□□□□□ -1.48
COL17A1-204ENST00000433822 SSTP61278 116 aa5.82□□□□□ -1.48
COL17A1-204ENST00000433822 PSG9Q00887 426 aa5.82□□□□□ -1.48
COL17A1-204ENST00000433822 KRTAP1-1Q07627 177 aa5.82□□□□□ -1.48
COL17A1-204ENST00000433822 CDSNQ15517 529 aa5.82□□□□□ -1.48
COL17A1-204ENST00000433822 PMCHL1Q16048 86 aa5.82□□□□□ -1.48
COL17A1-204ENST00000433822 ASPHD1Q5U4P2 390 aa5.82□□□□□ -1.48
COL17A1-204ENST00000433822 RUSC1-AS1Q66K80 236 aa5.82□□□□□ -1.48
COL17A1-204ENST00000433822 MRPL54Q6P161 138 aaKnown RBP5.82□□□□□ -1.48
COL17A1-204ENST00000433822 CIARTQ8N365 385 aaPredicted RBP5.82□□□□□ -1.48
COL17A1-204ENST00000433822 FAM110DQ8TAY7 271 aaPredicted RBP5.82□□□□□ -1.48
COL17A1-204ENST00000433822 BLNKQ8WV28 456 aa5.82□□□□□ -1.48
COL17A1-204ENST00000433822 CHCHD1Q96BP2 118 aaKnown RBP5.82□□□□□ -1.48
COL17A1-204ENST00000433822 ZNF414Q96IQ9 312 aa5.82□□□□□ -1.48
COL17A1-204ENST00000433822 HSPB9Q9BQS6 159 aa5.82□□□□□ -1.48
COL17A1-204ENST00000433822 ALKBH7Q9BT30 221 aaPredicted RBP5.82□□□□□ -1.48
COL17A1-204ENST00000433822 NDFIP1Q9BT67 221 aa5.82□□□□□ -1.48
COL17A1-204ENST00000433822 C21orf62Q9NYP8 219 aa5.82□□□□□ -1.48
COL17A1-204ENST00000433822 FN1P02751 2386 aaKnown RBP5.82□□□□□ -1.48
COL17A1-204ENST00000433822 A0A087X0K7 114 aa5.81□□□□□ -1.48
COL17A1-204ENST00000433822 TRAV34A0A0B4J273 112 aa5.81□□□□□ -1.48
COL17A1-204ENST00000433822 A0A1B0GUS0 222 aa5.81□□□□□ -1.48
COL17A1-204ENST00000433822 GNG7O60262 68 aa5.81□□□□□ -1.48
COL17A1-204ENST00000433822 BRI3O95415 125 aa5.81□□□□□ -1.48
COL17A1-204ENST00000433822 SCGB1D1O95968 90 aa5.81□□□□□ -1.48
COL17A1-204ENST00000433822 IGHV3-48P01763 117 aa5.81□□□□□ -1.48
COL17A1-204ENST00000433822 APOHP02749 345 aaPredicted RBP5.81□□□□□ -1.48
COL17A1-204ENST00000433822 IL4P05112 153 aa5.81□□□□□ -1.48
COL17A1-204ENST00000433822 OR5AL1P0C617 328 aa5.81□□□□□ -1.48
COL17A1-204ENST00000433822 AMTP48728 403 aa5.81□□□□□ -1.48
COL17A1-204ENST00000433822 GNG5P63218 68 aa5.81□□□□□ -1.48
COL17A1-204ENST00000433822 SLAQ13239 276 aa5.81□□□□□ -1.48
COL17A1-204ENST00000433822 PSG3Q16557 428 aa5.81□□□□□ -1.48
COL17A1-204ENST00000433822 Q8N9W7 124 aa5.81□□□□□ -1.48
COL17A1-204ENST00000433822 TBX15Q96SF7 602 aa5.81□□□□□ -1.48
COL17A1-204ENST00000433822 PRO1933Q9H354 126 aa5.81□□□□□ -1.48
COL17A1-204ENST00000433822 AAMDCQ9H7C9 122 aa5.81□□□□□ -1.48
COL17A1-204ENST00000433822 NRN1Q9NPD7 142 aa5.81□□□□□ -1.48
COL17A1-204ENST00000433822 COL6A5A8TX70 2615 aa5.81□□□□□ -1.48
COL17A1-204ENST00000433822 ABCA4P78363 2273 aa5.81□□□□□ -1.48
COL17A1-204ENST00000433822 IGHV7-81A0A0B4J1V7 117 aa5.8□□□□□ -1.48
COL17A1-204ENST00000433822 DIRC3C9JPN6 131 aa5.8□□□□□ -1.48
COL17A1-204ENST00000433822 CRXO43186 299 aaPredicted RBP5.8□□□□□ -1.48
COL17A1-204ENST00000433822 FRMD6-AS1P0C7T7 363 aa5.8□□□□□ -1.48
COL17A1-204ENST00000433822 CSN1S1P47710 185 aa5.8□□□□□ -1.48
COL17A1-204ENST00000433822 DLX1P56177 255 aa5.8□□□□□ -1.48
COL17A1-204ENST00000433822 TCL1AP56279 114 aa5.8□□□□□ -1.48
COL17A1-204ENST00000433822 RPS20P60866 119 aaKnown RBP5.8□□□□□ -1.48
COL17A1-204ENST00000433822 RIGQ13278 110 aa5.8□□□□□ -1.48
COL17A1-204ENST00000433822 HES1Q14469 280 aa5.8□□□□□ -1.48
COL17A1-204ENST00000433822 SAPCD1Q5SSQ6 148 aa5.8□□□□□ -1.48
COL17A1-204ENST00000433822 LINC00322Q6ZN03 302 aaPredicted RBP5.8□□□□□ -1.48
COL17A1-204ENST00000433822 ZNF493Q6ZR52 646 aa5.8□□□□□ -1.48
COL17A1-204ENST00000433822 LHFPL4Q7Z7J7 247 aa5.8□□□□□ -1.48
COL17A1-204ENST00000433822 NIT1Q86X76 327 aa5.8□□□□□ -1.48
COL17A1-204ENST00000433822 LINC00469Q8N7U9 141 aa5.8□□□□□ -1.48
COL17A1-204ENST00000433822 Q8N976 141 aa5.8□□□□□ -1.48
COL17A1-204ENST00000433822 GTSF1Q8WW33 167 aa5.8□□□□□ -1.48
COL17A1-204ENST00000433822 ITLN2Q8WWU7 325 aaPredicted RBP5.8□□□□□ -1.48
COL17A1-204ENST00000433822 MRPL53Q96EL3 112 aaKnown RBP5.8□□□□□ -1.48
COL17A1-204ENST00000433822 MIEN1Q9BRT3 115 aa5.8□□□□□ -1.48
COL17A1-204ENST00000433822 VAMP8Q9BV40 100 aa5.8□□□□□ -1.48
COL17A1-204ENST00000433822 CLEC5AQ9NY25 188 aa5.8□□□□□ -1.48
COL17A1-204ENST00000433822 HILPDAQ9Y5L2 63 aa5.8□□□□□ -1.48
COL17A1-204ENST00000433822 NSD1Q96L73 2696 aaPredicted RBP5.8□□□□□ -1.48
COL17A1-204ENST00000433822 A0A1B0GUT8 65 aa5.79□□□□□ -1.48
COL17A1-204ENST00000433822 A0A1W2PRD5 423 aa5.79□□□□□ -1.48
COL17A1-204ENST00000433822 A0A1W2PRF3 423 aa5.79□□□□□ -1.48
COL17A1-204ENST00000433822 A0A1W2PRM7 423 aa5.79□□□□□ -1.48
COL17A1-204ENST00000433822 RBAKDNA6NC62 111 aa5.79□□□□□ -1.48
COL17A1-204ENST00000433822 ZNF705FA8MVS1 300 aaPredicted RBP5.79□□□□□ -1.48
COL17A1-204ENST00000433822 VWC2LB2RUY7 222 aa5.79□□□□□ -1.48
COL17A1-204ENST00000433822 M0R143 59 aa5.79□□□□□ -1.48
COL17A1-204ENST00000433822 NDUFS8O00217 210 aa5.79□□□□□ -1.48
COL17A1-204ENST00000433822 HSBP1O75506 76 aa5.79□□□□□ -1.48
COL17A1-204ENST00000433822 TOX4O94842 621 aa5.79□□□□□ -1.48
COL17A1-204ENST00000433822 CA1P00915 261 aaPredicted RBP5.79□□□□□ -1.48
COL17A1-204ENST00000433822 ZNF705DP0CH99 300 aaPredicted RBP5.79□□□□□ -1.48
COL17A1-204ENST00000433822 ZNF705BP0CI00 300 aaPredicted RBP5.79□□□□□ -1.48
COL17A1-204ENST00000433822 CT45A10P0DMU9 189 aa5.79□□□□□ -1.48
COL17A1-204ENST00000433822 EGR2P11161 476 aaPredicted RBP5.79□□□□□ -1.48
COL17A1-204ENST00000433822 TMEM11P17152 192 aa5.79□□□□□ -1.48
COL17A1-204ENST00000433822 CTRLP40313 264 aa5.79□□□□□ -1.48
COL17A1-204ENST00000433822 LMO4P61968 165 aa5.79□□□□□ -1.48
COL17A1-204ENST00000433822 NDPQ00604 133 aa5.79□□□□□ -1.48
COL17A1-204ENST00000433822 KLRD1Q13241 179 aa5.79□□□□□ -1.48
COL17A1-204ENST00000433822 GDF5OSQ5U4N7 250 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms