RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 STHQ8IWL8 128 aa11.37□□□□□ -0.59
CNOT9-205ENST00000433439 RPUSD4Q96CM3 377 aaKnown RBP11.37□□□□□ -0.59
CNOT9-205ENST00000433439 TEX46H3BTG2 121 aa11.36□□□□□ -0.59
CNOT9-205ENST00000433439 ZNF680Q8NEM1 530 aa11.36□□□□□ -0.59
CNOT9-205ENST00000433439 OR4B1Q8NGF8 309 aa11.36□□□□□ -0.59
CNOT9-205ENST00000433439 PCNPQ8WW12 178 aaKnown RBP11.36□□□□□ -0.59
CNOT9-205ENST00000433439 PRAC2D3DTV9 90 aa11.35□□□□□ -0.59
CNOT9-205ENST00000433439 IFNA7P01567 189 aa11.35□□□□□ -0.59
CNOT9-205ENST00000433439 HBE1P02100 147 aa11.35□□□□□ -0.59
CNOT9-205ENST00000433439 SLC25A5P05141 298 aaKnown RBP11.35□□□□□ -0.59
CNOT9-205ENST00000433439 BLOC1S1P78537 153 aa11.35□□□□□ -0.59
CNOT9-205ENST00000433439 HIST1H1AQ02539 215 aaPredicted RBP11.35□□□□□ -0.59
CNOT9-205ENST00000433439 FOXI2Q6ZQN5 318 aa11.35□□□□□ -0.59
CNOT9-205ENST00000433439 CMTM2Q8TAZ6 248 aa11.35□□□□□ -0.59
CNOT9-205ENST00000433439 SAV1Q9H4B6 383 aaPredicted RBP11.35□□□□□ -0.59
CNOT9-205ENST00000433439 OTORQ9NRC9 128 aa11.35□□□□□ -0.59
CNOT9-205ENST00000433439 CLEC5AQ9NY25 188 aa11.35□□□□□ -0.59
CNOT9-205ENST00000433439 PRELID1Q9Y255 219 aa11.35□□□□□ -0.59
CNOT9-205ENST00000433439 NOTCH1P46531 2555 aa11.35□□□□□ -0.59
CNOT9-205ENST00000433439 RBMY1BA6NDE4 496 aaKnown RBP11.34□□□□□ -0.59
CNOT9-205ENST00000433439 RBMY1EA6NEQ0 496 aaKnown RBP11.34□□□□□ -0.59
CNOT9-205ENST00000433439 RBMY1DP0C7P1 496 aaKnown RBP11.34□□□□□ -0.59
CNOT9-205ENST00000433439 FRMD6-AS1P0C7T7 363 aa11.34□□□□□ -0.59
CNOT9-205ENST00000433439 CSN1S1P47710 185 aa11.34□□□□□ -0.59
CNOT9-205ENST00000433439 SUMO1P63165 101 aaKnown RBP11.34□□□□□ -0.59
CNOT9-205ENST00000433439 CCL20P78556 96 aa11.34□□□□□ -0.59
CNOT9-205ENST00000433439 CST9LP1Q5W188 147 aa11.34□□□□□ -0.59
CNOT9-205ENST00000433439 LYPD1Q8N2G4 141 aa11.34□□□□□ -0.59
CNOT9-205ENST00000433439 SUN5Q8TC36 379 aa11.34□□□□□ -0.59
CNOT9-205ENST00000433439 GNG13Q9P2W3 67 aa11.34□□□□□ -0.59
CNOT9-205ENST00000433439 YTHDF2Q9Y5A9 579 aaKnown RBP11.34□□□□□ -0.59
CNOT9-205ENST00000433439 AGRNO00468 2067 aa11.33□□□□□ -0.6
CNOT9-205ENST00000433439 LOC102724200A0A096LPH7 203 aaPredicted RBP11.33□□□□□ -0.6
CNOT9-205ENST00000433439 A0A0J9YX75 114 aa11.33□□□□□ -0.6
CNOT9-205ENST00000433439 PAGE4O60829 102 aa11.33□□□□□ -0.6
CNOT9-205ENST00000433439 GNG5P63218 68 aa11.33□□□□□ -0.6
CNOT9-205ENST00000433439 OR8A1Q8NGG7 326 aa11.33□□□□□ -0.6
CNOT9-205ENST00000433439 OR10J6PQ8NGY7 276 aa11.33□□□□□ -0.6
CNOT9-205ENST00000433439 IGKV2-40A0A087WW87 121 aaPredicted RBP11.32□□□□□ -0.6
CNOT9-205ENST00000433439 TRAV1-1A0A0B4J248 108 aa11.32□□□□□ -0.6
CNOT9-205ENST00000433439 FAM74A7A6NL05 159 aa11.32□□□□□ -0.6
CNOT9-205ENST00000433439 GGTLC3B5MD39 225 aa11.32□□□□□ -0.6
CNOT9-205ENST00000433439 H3BMM0 161 aa11.32□□□□□ -0.6
CNOT9-205ENST00000433439 IGKV2D-40P01614 121 aaPredicted RBP11.32□□□□□ -0.6
CNOT9-205ENST00000433439 HLA-DRB4P13762 266 aa11.32□□□□□ -0.6
CNOT9-205ENST00000433439 CNN1P51911 297 aaKnown RBP11.32□□□□□ -0.6
CNOT9-205ENST00000433439 FXYD7P58549 80 aa11.32□□□□□ -0.6
CNOT9-205ENST00000433439 MRPL53Q96EL3 112 aaKnown RBP11.32□□□□□ -0.6
CNOT9-205ENST00000433439 PPP1R14DQ9NXH3 145 aa11.32□□□□□ -0.6
CNOT9-205ENST00000433439 HLA-DRB4X5D2U9 266 aa11.32□□□□□ -0.6
CNOT9-205ENST00000433439 A0A1W2PRE2 83 aa11.31□□□□□ -0.6
CNOT9-205ENST00000433439 DUSP14O95147 198 aaKnown RBP11.31□□□□□ -0.6
CNOT9-205ENST00000433439 ATP5G3P48201 142 aa11.31□□□□□ -0.6
CNOT9-205ENST00000433439 ERCC8Q13216 396 aa11.31□□□□□ -0.6
CNOT9-205ENST00000433439 TRPT1Q86TN4 253 aaKnown RBP11.31□□□□□ -0.6
CNOT9-205ENST00000433439 RXFP4Q8TDU9 374 aa11.31□□□□□ -0.6
CNOT9-205ENST00000433439 ASCL2Q99929 193 aa11.31□□□□□ -0.6
CNOT9-205ENST00000433439 PPT1P50897 306 aa11.3□□□□□ -0.6
CNOT9-205ENST00000433439 HAGHQ16775 308 aa11.3□□□□□ -0.6
CNOT9-205ENST00000433439 GOLT1AQ6ZVE7 132 aa11.3□□□□□ -0.6
CNOT9-205ENST00000433439 C5orf17Q8NAS9 161 aa11.3□□□□□ -0.6
CNOT9-205ENST00000433439 A8MZ25 164 aa11.29□□□□□ -0.6
CNOT9-205ENST00000433439 DIRC3C9JPN6 131 aa11.29□□□□□ -0.6
CNOT9-205ENST00000433439 IFNA1P01562 189 aa11.29□□□□□ -0.6
CNOT9-205ENST00000433439 APOC4P55056 127 aa11.29□□□□□ -0.6
CNOT9-205ENST00000433439 SGK494Q96LW2 274 aa11.29□□□□□ -0.6
CNOT9-205ENST00000433439 VGLL1Q99990 258 aa11.29□□□□□ -0.6
CNOT9-205ENST00000433439 SLC35B3Q9H1N7 401 aa11.29□□□□□ -0.6
CNOT9-205ENST00000433439 MANBALQ9NQG1 85 aa11.29□□□□□ -0.6
CNOT9-205ENST00000433439 TGP01266 2768 aa11.29□□□□□ -0.6
CNOT9-205ENST00000433439 J3KRW8 73 aa11.28□□□□□ -0.6
CNOT9-205ENST00000433439 CA1P00915 261 aaPredicted RBP11.28□□□□□ -0.6
CNOT9-205ENST00000433439 IFITM2Q01629 132 aa11.28□□□□□ -0.6
CNOT9-205ENST00000433439 CSTL1Q9H114 145 aa11.28□□□□□ -0.6
CNOT9-205ENST00000433439 EPDR1Q9UM22 224 aa11.28□□□□□ -0.6
CNOT9-205ENST00000433439 C11orf94C9JXX5 98 aa11.27□□□□□ -0.61
CNOT9-205ENST00000433439 NPIPB6E9PJ23 425 aa11.27□□□□□ -0.61
CNOT9-205ENST00000433439 TCRAP04437 139 aa11.27□□□□□ -0.61
CNOT9-205ENST00000433439 RAB14P61106 215 aa11.27□□□□□ -0.61
CNOT9-205ENST00000433439 NUTF2P61970 127 aaKnown RBP11.27□□□□□ -0.61
CNOT9-205ENST00000433439 SPINK13Q1W4C9 94 aa11.27□□□□□ -0.61
CNOT9-205ENST00000433439 TMEM78Q5T7P6 136 aa11.27□□□□□ -0.61
CNOT9-205ENST00000433439 MORN3Q6PF18 240 aaPredicted RBP11.27□□□□□ -0.61
CNOT9-205ENST00000433439 LINC00322Q6ZN03 302 aaPredicted RBP11.27□□□□□ -0.61
CNOT9-205ENST00000433439 Q8TAT8 98 aa11.27□□□□□ -0.61
CNOT9-205ENST00000433439 NKX6-2Q9C056 277 aaPredicted RBP11.27□□□□□ -0.61
CNOT9-205ENST00000433439 AGPAT4-IT1Q9H0P7 198 aa11.27□□□□□ -0.61
CNOT9-205ENST00000433439 XCL2Q9UBD3 114 aa11.27□□□□□ -0.61
CNOT9-205ENST00000433439 TRAV8-1A0A0A6YYK1 113 aa11.26□□□□□ -0.61
CNOT9-205ENST00000433439 K7EQM0 130 aa11.26□□□□□ -0.61
CNOT9-205ENST00000433439 M0R2Z0 102 aa11.26□□□□□ -0.61
CNOT9-205ENST00000433439 NMBP08949 121 aa11.26□□□□□ -0.61
CNOT9-205ENST00000433439 ZNF767PQ75MW2 155 aa11.26□□□□□ -0.61
CNOT9-205ENST00000433439 SBSPONQ8IVN8 264 aa11.26□□□□□ -0.61
CNOT9-205ENST00000433439 ARL2-SNX15V9GYD0 113 aa11.26□□□□□ -0.61
CNOT9-205ENST00000433439 TRAV34A0A0B4J273 112 aa11.25□□□□□ -0.61
CNOT9-205ENST00000433439 F6UZH7 168 aa11.25□□□□□ -0.61
CNOT9-205ENST00000433439 PEX7O00628 323 aa11.25□□□□□ -0.61
CNOT9-205ENST00000433439 CT45A10P0DMU9 189 aa11.25□□□□□ -0.61
CNOT9-205ENST00000433439 BCL2P10415 239 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms