RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 TMEM70Q9BUB7 260 aa14.98□□□□□ -0.01
PTPRA-207ENST00000431048 FNDC10F2Z333 226 aa14.97□□□□□ -0.01
PTPRA-207ENST00000431048 PAX4O43316 350 aa14.97□□□□□ -0.01
PTPRA-207ENST00000431048 NPVFQ9HCQ7 196 aa14.97□□□□□ -0.01
PTPRA-207ENST00000431048 GSN-AS1Q9NRJ2 163 aa14.97□□□□□ -0.01
PTPRA-207ENST00000431048 RSL24D1Q9UHA3 163 aaKnown RBP14.97□□□□□ -0.01
PTPRA-207ENST00000431048 FUT9Q9Y231 359 aa14.97□□□□□ -0.01
PTPRA-207ENST00000431048 PXMP4Q9Y6I8 212 aa14.97□□□□□ -0.01
PTPRA-207ENST00000431048 ID3Q02535 119 aa14.96□□□□□ -0.01
PTPRA-207ENST00000431048 SLAQ13239 276 aa14.96□□□□□ -0.01
PTPRA-207ENST00000431048 BPIFA4PQ86YQ2 179 aa14.96□□□□□ -0.01
PTPRA-207ENST00000431048 MSRB1Q9NZV6 116 aa14.96□□□□□ -0.01
PTPRA-207ENST00000431048 TRGV1A0A0A0MS02 117 aa14.95□□□□□ -0.02
PTPRA-207ENST00000431048 NPIPB6E9PJ23 425 aa14.95□□□□□ -0.02
PTPRA-207ENST00000431048 SPINK4O60575 86 aa14.95□□□□□ -0.02
PTPRA-207ENST00000431048 ANXA2RQ3ZCQ2 193 aa14.95□□□□□ -0.02
PTPRA-207ENST00000431048 TEPPQ6URK8 271 aa14.95□□□□□ -0.02
PTPRA-207ENST00000431048 LINC00305Q7Z4B0 112 aa14.95□□□□□ -0.02
PTPRA-207ENST00000431048 SAT2Q96F10 170 aaPredicted RBP14.95□□□□□ -0.02
PTPRA-207ENST00000431048 PRO0255Q9UI72 69 aa14.95□□□□□ -0.02
PTPRA-207ENST00000431048 LY96Q9Y6Y9 160 aa14.95□□□□□ -0.02
PTPRA-207ENST00000431048 HMCN2Q8NDA2 5059 aa14.95□□□□□ -0.02
PTPRA-207ENST00000431048 LINC00854A0A1B0GVQ3 168 aa14.94□□□□□ -0.02
PTPRA-207ENST00000431048 J3KRW8 73 aa14.94□□□□□ -0.02
PTPRA-207ENST00000431048 SLC17A3O00476 420 aa14.94□□□□□ -0.02
PTPRA-207ENST00000431048 SFT2D2O95562 160 aa14.94□□□□□ -0.02
PTPRA-207ENST00000431048 SLC25A5P05141 298 aaKnown RBP14.94□□□□□ -0.02
PTPRA-207ENST00000431048 VAMP1P23763 118 aa14.94□□□□□ -0.02
PTPRA-207ENST00000431048 MRPL23Q16540 153 aaKnown RBP14.94□□□□□ -0.02
PTPRA-207ENST00000431048 ST6GAL2Q96JF0 529 aa14.94□□□□□ -0.02
PTPRA-207ENST00000431048 PSENENQ9NZ42 101 aa14.94□□□□□ -0.02
PTPRA-207ENST00000431048 HOXB5P09067 269 aa14.93□□□□□ -0.02
PTPRA-207ENST00000431048 SNRPCP09234 159 aaKnown RBP14.93□□□□□ -0.02
PTPRA-207ENST00000431048 SOSTQ9BQB4 213 aa14.93□□□□□ -0.02
PTPRA-207ENST00000431048 KRTAP29-1A8MX34 341 aaPredicted RBP14.92□□□□□ -0.02
PTPRA-207ENST00000431048 IGLC2P0DOY2 106 aa14.92□□□□□ -0.02
PTPRA-207ENST00000431048 FAUP35544 74 aaKnown RBP14.92□□□□□ -0.02
PTPRA-207ENST00000431048 CRYBA4P53673 196 aa14.92□□□□□ -0.02
PTPRA-207ENST00000431048 POLR2GP62487 172 aaKnown RBP eCLIP14.92□□□□□ -0.02
PTPRA-207ENST00000431048 EIF4E3Q8N5X7 224 aaKnown RBP14.92□□□□□ -0.02
PTPRA-207ENST00000431048 SMIM8Q96KF7 97 aa14.92□□□□□ -0.02
PTPRA-207ENST00000431048 C7orf71A4D174 169 aa14.91□□□□□ -0.02
PTPRA-207ENST00000431048 TCL1AP56279 114 aa14.91□□□□□ -0.02
PTPRA-207ENST00000431048 TMEM14EPQ6UXP3 125 aa14.91□□□□□ -0.02
PTPRA-207ENST00000431048 NEGR1Q7Z3B1 354 aa14.91□□□□□ -0.02
PTPRA-207ENST00000431048 ZNF546Q86UE3 836 aa14.91□□□□□ -0.02
PTPRA-207ENST00000431048 NTN5Q8WTR8 489 aaPredicted RBP14.91□□□□□ -0.02
PTPRA-207ENST00000431048 HHLA3Q9XRX5 114 aa14.91□□□□□ -0.02
PTPRA-207ENST00000431048 KLF12Q9Y4X4 402 aa14.91□□□□□ -0.02
PTPRA-207ENST00000431048 H3BQ15 152 aa14.9□□□□□ -0.02
PTPRA-207ENST00000431048 GOSR2O14653 212 aa14.9□□□□□ -0.02
PTPRA-207ENST00000431048 EVI2AP22794 236 aa14.9□□□□□ -0.02
PTPRA-207ENST00000431048 RRAS2P62070 204 aaPredicted RBP14.9□□□□□ -0.02
PTPRA-207ENST00000431048 HAMPP81172 84 aa14.9□□□□□ -0.02
PTPRA-207ENST00000431048 SLC38A11Q08AI6 406 aa14.9□□□□□ -0.02
PTPRA-207ENST00000431048 PPP1R1AQ13522 171 aa14.9□□□□□ -0.02
PTPRA-207ENST00000431048 GUK1Q16774 197 aa14.9□□□□□ -0.02
PTPRA-207ENST00000431048 TMEM37Q8WXS4 190 aa14.9□□□□□ -0.02
PTPRA-207ENST00000431048 SLC25A21Q9BQT8 299 aaPredicted RBP14.9□□□□□ -0.02
PTPRA-207ENST00000431048 UBR4Q5T4S7 5183 aa14.9□□□□□ -0.02
PTPRA-207ENST00000431048 IGLV5-52A0A0A0MRZ9 124 aa14.89□□□□□ -0.03
PTPRA-207ENST00000431048 KLLNB2CW77 178 aa14.89□□□□□ -0.03
PTPRA-207ENST00000431048 H3BTX0 84 aa14.89□□□□□ -0.03
PTPRA-207ENST00000431048 CCNKO75909 580 aa14.89□□□□□ -0.03
PTPRA-207ENST00000431048 FHL2Q14192 279 aa14.89□□□□□ -0.03
PTPRA-207ENST00000431048 SPCS2Q15005 226 aa14.89□□□□□ -0.03
PTPRA-207ENST00000431048 IBA57Q5T440 356 aaKnown RBP14.89□□□□□ -0.03
PTPRA-207ENST00000431048 OR10P1Q8NGE3 313 aa14.89□□□□□ -0.03
PTPRA-207ENST00000431048 VGLL1Q99990 258 aa14.89□□□□□ -0.03
PTPRA-207ENST00000431048 CCDC59Q9P031 241 aaKnown RBP14.89□□□□□ -0.03
PTPRA-207ENST00000431048 MGAT4CQ9UBM8 478 aa14.89□□□□□ -0.03
PTPRA-207ENST00000431048 PRAF2O60831 178 aa14.88□□□□□ -0.03
PTPRA-207ENST00000431048 OPCMLQ14982 345 aa14.88□□□□□ -0.03
PTPRA-207ENST00000431048 MRPL53Q96EL3 112 aaKnown RBP14.88□□□□□ -0.03
PTPRA-207ENST00000431048 FAM19A4Q96LR4 140 aa14.88□□□□□ -0.03
PTPRA-207ENST00000431048 AGPAT2O15120 278 aa14.87□□□□□ -0.03
PTPRA-207ENST00000431048 COX7A2P2O60397 106 aa14.87□□□□□ -0.03
PTPRA-207ENST00000431048 METTL15P1P0C7V9 234 aa14.87□□□□□ -0.03
PTPRA-207ENST00000431048 MORN5Q5VZ52 161 aa14.87□□□□□ -0.03
PTPRA-207ENST00000431048 LINC00477Q96M19 166 aa14.87□□□□□ -0.03
PTPRA-207ENST00000431048 MRPL32Q9BYC8 188 aaKnown RBP14.87□□□□□ -0.03
PTPRA-207ENST00000431048 LRCOL1A6NCL2 159 aa14.86□□□□□ -0.03
PTPRA-207ENST00000431048 ZNF253O75346 499 aa14.86□□□□□ -0.03
PTPRA-207ENST00000431048 IGHV3-53P01767 116 aa14.86□□□□□ -0.03
PTPRA-207ENST00000431048 C1QBP02746 253 aa14.86□□□□□ -0.03
PTPRA-207ENST00000431048 SERTAD4-AS1Q5TG53 156 aa14.86□□□□□ -0.03
PTPRA-207ENST00000431048 C10orf113Q5VZT2 155 aa14.86□□□□□ -0.03
PTPRA-207ENST00000431048 WFDC10BQ8IUB3 73 aa14.86□□□□□ -0.03
PTPRA-207ENST00000431048 C10orf126Q8N4M7 172 aa14.86□□□□□ -0.03
PTPRA-207ENST00000431048 C8orf49Q96NF6 230 aa14.86□□□□□ -0.03
PTPRA-207ENST00000431048 GGACTQ9BVM4 153 aa14.86□□□□□ -0.03
PTPRA-207ENST00000431048 FABP12A6NFH5 140 aa14.85□□□□□ -0.03
PTPRA-207ENST00000431048 SSSCA1O60232 199 aa14.85□□□□□ -0.03
PTPRA-207ENST00000431048 MPDU1O75352 247 aa14.85□□□□□ -0.03
PTPRA-207ENST00000431048 SMIM18P0DKX4 95 aa14.85□□□□□ -0.03
PTPRA-207ENST00000431048 AP3S2P59780 193 aa14.85□□□□□ -0.03
PTPRA-207ENST00000431048 CD300CQ08708 224 aa14.85□□□□□ -0.03
PTPRA-207ENST00000431048 IQCF2Q8IXL9 164 aa14.85□□□□□ -0.03
PTPRA-207ENST00000431048 PLA2G1BP04054 148 aaKnown RBP14.84□□□□□ -0.03
PTPRA-207ENST00000431048 NMBP08949 121 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms