RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 ZNF462Q96JM2 2506 aa12.54□□□□□ -0.4
MBD4-203ENST00000429544 IGHV3-49A0A0A0MS15 119 aa12.53□□□□□ -0.4
MBD4-203ENST00000429544 A1L4Q6 167 aa12.53□□□□□ -0.4
MBD4-203ENST00000429544 ZNF705FA8MVS1 300 aaPredicted RBP12.53□□□□□ -0.4
MBD4-203ENST00000429544 IGHG4P01861 327 aa12.53□□□□□ -0.4
MBD4-203ENST00000429544 COX6B1P14854 86 aa12.53□□□□□ -0.4
MBD4-203ENST00000429544 AMTP48728 403 aa12.53□□□□□ -0.4
MBD4-203ENST00000429544 FAM223BA6NKX1 122 aa12.53□□□□□ -0.4
MBD4-203ENST00000429544 APOHP02749 345 aaPredicted RBP12.53□□□□□ -0.4
MBD4-203ENST00000429544 ZNF705DP0CH99 300 aaPredicted RBP12.53□□□□□ -0.4
MBD4-203ENST00000429544 ZNF705BP0CI00 300 aaPredicted RBP12.53□□□□□ -0.4
MBD4-203ENST00000429544 RAB9AP51151 201 aa12.53□□□□□ -0.4
MBD4-203ENST00000429544 RELQ04864 619 aaPredicted RBP12.53□□□□□ -0.4
MBD4-203ENST00000429544 FAM223AQ8IWN6 122 aa12.53□□□□□ -0.4
MBD4-203ENST00000429544 PAX1P15863 534 aa12.52□□□□□ -0.4
MBD4-203ENST00000429544 ZNF843Q8N446 348 aa12.52□□□□□ -0.4
MBD4-203ENST00000429544 Q8TAT8 98 aa12.52□□□□□ -0.4
MBD4-203ENST00000429544 VGLL1Q99990 258 aa12.52□□□□□ -0.4
MBD4-203ENST00000429544 RNF114Q9Y508 228 aa12.52□□□□□ -0.4
MBD4-203ENST00000429544 A0A087X0K7 114 aa12.52□□□□□ -0.41
MBD4-203ENST00000429544 A8MWP6 167 aa12.52□□□□□ -0.41
MBD4-203ENST00000429544 ZNF324O75467 553 aaPredicted RBP12.52□□□□□ -0.41
MBD4-203ENST00000429544 DDTP30046 118 aa12.52□□□□□ -0.41
MBD4-203ENST00000429544 KLF5Q13887 457 aaPredicted RBP12.52□□□□□ -0.41
MBD4-203ENST00000429544 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.52□□□□□ -0.41
MBD4-203ENST00000429544 METTL26Q96S19 204 aa12.52□□□□□ -0.41
MBD4-203ENST00000429544 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.52□□□□□ -0.416e-12■■□□□ 11.8
MBD4-203ENST00000429544 SRSF1Q07955 248 aaKnown RBP eCLIP12.51□□□□□ -0.41
MBD4-203ENST00000429544 ARL6IP6Q8N6S5 226 aa12.51□□□□□ -0.41
MBD4-203ENST00000429544 HAX1O00165 279 aa12.51□□□□□ -0.41
MBD4-203ENST00000429544 SH2D1AO60880 128 aa12.51□□□□□ -0.41
MBD4-203ENST00000429544 IGF1P05019 195 aa12.51□□□□□ -0.41
MBD4-203ENST00000429544 SLC25A16P16260 332 aa12.51□□□□□ -0.41
MBD4-203ENST00000429544 LCN12Q6JVE5 192 aa12.51□□□□□ -0.41
MBD4-203ENST00000429544 FAM19A2Q8N3H0 131 aa12.51□□□□□ -0.41
MBD4-203ENST00000429544 RNF182Q8N6D2 247 aa12.51□□□□□ -0.41
MBD4-203ENST00000429544 PRR25Q96S07 402 aa12.51□□□□□ -0.41
MBD4-203ENST00000429544 NRN1Q9NPD7 142 aa12.51□□□□□ -0.41
MBD4-203ENST00000429544 IGHG2P01859 326 aa12.5□□□□□ -0.41
MBD4-203ENST00000429544 ARMS2P0C7Q2 107 aa12.5□□□□□ -0.41
MBD4-203ENST00000429544 NTF3P20783 257 aa12.5□□□□□ -0.41
MBD4-203ENST00000429544 FOXA3P55318 350 aaPredicted RBP12.5□□□□□ -0.41
MBD4-203ENST00000429544 DEFA6Q01524 100 aa12.5□□□□□ -0.41
MBD4-203ENST00000429544 TPPP3Q9BW30 176 aa12.5□□□□□ -0.41
MBD4-203ENST00000429544 FAM208BQ5VWN6 2430 aa12.5□□□□□ -0.41
MBD4-203ENST00000429544 TMSB15BA0A087X1C1 80 aa12.5□□□□□ -0.41
MBD4-203ENST00000429544 A0A1B0GUT8 65 aa12.5□□□□□ -0.41
MBD4-203ENST00000429544 BLCAPP62952 87 aa12.5□□□□□ -0.41
MBD4-203ENST00000429544 ANKRD17O75179 2603 aaKnown RBP12.49□□□□□ -0.41
MBD4-203ENST00000429544 ARL3P36405 182 aa12.49□□□□□ -0.41
MBD4-203ENST00000429544 KRTDAPP60985 99 aa12.49□□□□□ -0.41
MBD4-203ENST00000429544 FAM209BQ5JX69 171 aa12.49□□□□□ -0.41
MBD4-203ENST00000429544 SAPCD1Q5SSQ6 148 aa12.49□□□□□ -0.41
MBD4-203ENST00000429544 FAM162BQ5T6X4 162 aa12.49□□□□□ -0.41
MBD4-203ENST00000429544 RNASEKQ6P5S7 137 aaKnown RBP12.49□□□□□ -0.41
MBD4-203ENST00000429544 Q6ZS46 218 aa12.49□□□□□ -0.41
MBD4-203ENST00000429544 PRAC2D3DTV9 90 aa12.49□□□□□ -0.41
MBD4-203ENST00000429544 TRBV12-3P01733 135 aa12.49□□□□□ -0.41
MBD4-203ENST00000429544 ERCC8Q13216 396 aa12.49□□□□□ -0.41
MBD4-203ENST00000429544 C1orf194Q5T5A4 169 aa12.49□□□□□ -0.41
MBD4-203ENST00000429544 TMEM189A5PLL7 270 aa12.48□□□□□ -0.41
MBD4-203ENST00000429544 FBLL1A6NHQ2 334 aaKnown RBP12.48□□□□□ -0.41
MBD4-203ENST00000429544 GATA3P23771 443 aa12.48□□□□□ -0.41
MBD4-203ENST00000429544 MAPK1IP1LQ8NDC0 245 aa12.48□□□□□ -0.41
MBD4-203ENST00000429544 ATP6V0BQ99437 205 aa12.48□□□□□ -0.41
MBD4-203ENST00000429544 SLC50A1Q9BRV3 221 aa12.48□□□□□ -0.41
MBD4-203ENST00000429544 M0QZK8 103 aa12.48□□□□□ -0.41
MBD4-203ENST00000429544 PPIFP30405 207 aaKnown RBP12.48□□□□□ -0.41
MBD4-203ENST00000429544 RIGQ13278 110 aa12.48□□□□□ -0.41
MBD4-203ENST00000429544 NIT1Q86X76 327 aa12.48□□□□□ -0.41
MBD4-203ENST00000429544 LINC01356Q8N9X3 169 aa12.48□□□□□ -0.41
MBD4-203ENST00000429544 U3KQE9 123 aa12.48□□□□□ -0.41
MBD4-203ENST00000429544 LOC102724200A0A096LPH7 203 aaPredicted RBP12.47□□□□□ -0.41
MBD4-203ENST00000429544 IGHV3-11P01762 117 aa12.47□□□□□ -0.41
MBD4-203ENST00000429544 ZNF80P51504 273 aaPredicted RBP12.47□□□□□ -0.41
MBD4-203ENST00000429544 COX8CQ7Z4L0 72 aa12.47□□□□□ -0.41
MBD4-203ENST00000429544 A0A096LNT2 108 aa12.47□□□□□ -0.41
MBD4-203ENST00000429544 HSBP1O75506 76 aa12.47□□□□□ -0.41
MBD4-203ENST00000429544 PF4V1P10720 104 aa12.47□□□□□ -0.41
MBD4-203ENST00000429544 KLK15Q9H2R5 256 aa12.47□□□□□ -0.41
MBD4-203ENST00000429544 FBN2P35556 2912 aa12.46□□□□□ -0.41
MBD4-203ENST00000429544 UBR5O95071 2799 aaPredicted RBP12.46□□□□□ -0.41
MBD4-203ENST00000429544 Q6AWC8 147 aa12.46□□□□□ -0.41
MBD4-203ENST00000429544 LCNL1Q6ZST4 164 aa12.46□□□□□ -0.41
MBD4-203ENST00000429544 C14orf144Q96I85 54 aa12.46□□□□□ -0.41
MBD4-203ENST00000429544 M0QZ24 198 aa12.46□□□□□ -0.42
MBD4-203ENST00000429544 TEX43Q6ZNM6 134 aa12.46□□□□□ -0.42
MBD4-203ENST00000429544 C8orf86Q6ZUL3 223 aa12.46□□□□□ -0.42
MBD4-203ENST00000429544 NDFIP1Q9BT67 221 aa12.46□□□□□ -0.42
MBD4-203ENST00000429544 LRRK2Q5S007 2527 aa12.45□□□□□ -0.42
MBD4-203ENST00000429544 CSPG4Q6UVK1 2322 aa12.45□□□□□ -0.42
MBD4-203ENST00000429544 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.45□□□□□ -0.42
MBD4-203ENST00000429544 TRAV8-2A0A0B4J237 113 aa12.45□□□□□ -0.42
MBD4-203ENST00000429544 H3BUA1 57 aa12.45□□□□□ -0.42
MBD4-203ENST00000429544 LYZL1Q6UWQ5 148 aa12.45□□□□□ -0.42
MBD4-203ENST00000429544 UNQ9165/PRO28630Q6UXU0 137 aa12.45□□□□□ -0.42
MBD4-203ENST00000429544 REC114Q7Z4M0 266 aa12.45□□□□□ -0.42
MBD4-203ENST00000429544 BORCS7Q96B45 105 aa12.45□□□□□ -0.42
MBD4-203ENST00000429544 URB1-AS1Q96HZ7 61 aa12.45□□□□□ -0.42
MBD4-203ENST00000429544 CSMD2Q7Z408 3487 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms