RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 PSG3Q16557 428 aa11.48□□□□□ -0.57
COL11A1-204ENST00000427239 ODF3L2Q3SX64 289 aa11.48□□□□□ -0.57
COL11A1-204ENST00000427239 PSMG4Q5JS54 123 aa11.48□□□□□ -0.57
COL11A1-204ENST00000427239 PRR25Q96S07 402 aa11.48□□□□□ -0.57
COL11A1-204ENST00000427239 MAP6D1Q9H9H5 199 aa11.48□□□□□ -0.57
COL11A1-204ENST00000427239 DEFB131AP59861 70 aa11.47□□□□□ -0.57
COL11A1-204ENST00000427239 PMS2P11Q13670 270 aa11.47□□□□□ -0.57
COL11A1-204ENST00000427239 IGFL4Q6B9Z1 124 aa11.47□□□□□ -0.57
COL11A1-204ENST00000427239 ATRAIDQ6UW56 229 aa11.47□□□□□ -0.57
COL11A1-204ENST00000427239 Q8N1Y9 231 aa11.47□□□□□ -0.57
COL11A1-204ENST00000427239 LYPD6BQ8NI32 183 aa11.47□□□□□ -0.57
COL11A1-204ENST00000427239 C19orf73Q9NVV2 129 aa11.47□□□□□ -0.57
COL11A1-204ENST00000427239 ARL2-SNX15V9GYD0 113 aa11.47□□□□□ -0.57
COL11A1-204ENST00000427239 ICAM4Q14773 271 aa11.46□□□□□ -0.57
COL11A1-204ENST00000427239 RNF182Q8N6D2 247 aa11.46□□□□□ -0.57
COL11A1-204ENST00000427239 MRPL53Q96EL3 112 aaKnown RBP11.46□□□□□ -0.57
COL11A1-204ENST00000427239 Q9H3A6 140 aa11.46□□□□□ -0.57
COL11A1-204ENST00000427239 OTORQ9NRC9 128 aa11.46□□□□□ -0.57
COL11A1-204ENST00000427239 A0A1B0GV50 99 aa11.46□□□□□ -0.58
COL11A1-204ENST00000427239 CCL20P78556 96 aa11.46□□□□□ -0.58
COL11A1-204ENST00000427239 EXOC3-AS1Q8N2X6 119 aa11.46□□□□□ -0.58
COL11A1-204ENST00000427239 ARL6IP6Q8N6S5 226 aa11.46□□□□□ -0.58
COL11A1-204ENST00000427239 RXFP4Q8TDU9 374 aa11.46□□□□□ -0.58
COL11A1-204ENST00000427239 PGPA6NDG6 321 aa11.45□□□□□ -0.58
COL11A1-204ENST00000427239 FAM74A7A6NL05 159 aa11.45□□□□□ -0.58
COL11A1-204ENST00000427239 FAM74A3Q4VXF1 159 aa11.45□□□□□ -0.58
COL11A1-204ENST00000427239 ZNF738Q8NE65 137 aa11.45□□□□□ -0.58
COL11A1-204ENST00000427239 C20orf173Q96LM9 149 aa11.45□□□□□ -0.58
COL11A1-204ENST00000427239 RAB19A4D1S5 217 aa11.44□□□□□ -0.58
COL11A1-204ENST00000427239 HLA-DMBP28068 263 aa11.44□□□□□ -0.58
COL11A1-204ENST00000427239 CSN1S1P47710 185 aa11.44□□□□□ -0.58
COL11A1-204ENST00000427239 SUMO1P63165 101 aaKnown RBP11.44□□□□□ -0.58
COL11A1-204ENST00000427239 APRG1Q8IVJ8 170 aa11.44□□□□□ -0.58
COL11A1-204ENST00000427239 RPUSD4Q96CM3 377 aaKnown RBP11.44□□□□□ -0.58
COL11A1-204ENST00000427239 MANBALQ9NQG1 85 aa11.44□□□□□ -0.58
COL11A1-204ENST00000427239 BIN3Q9NQY0 253 aa11.44□□□□□ -0.58
COL11A1-204ENST00000427239 UBE2G2P60604 165 aa11.43□□□□□ -0.58
COL11A1-204ENST00000427239 EBLN2Q6P2I7 272 aa11.43□□□□□ -0.58
COL11A1-204ENST00000427239 FOXI2Q6ZQN5 318 aa11.43□□□□□ -0.58
COL11A1-204ENST00000427239 SVBPQ8N300 66 aa11.43□□□□□ -0.58
COL11A1-204ENST00000427239 CMTM2Q8TAZ6 248 aa11.43□□□□□ -0.58
COL11A1-204ENST00000427239 C12orf57Q99622 126 aa11.43□□□□□ -0.58
COL11A1-204ENST00000427239 DNAH3Q8TD57 4116 aa11.43□□□□□ -0.58
COL11A1-204ENST00000427239 M0R3E3 92 aa11.43□□□□□ -0.58
COL11A1-204ENST00000427239 PAGE4O60829 102 aa11.43□□□□□ -0.58
COL11A1-204ENST00000427239 IFNA1P01562 189 aa11.43□□□□□ -0.58
COL11A1-204ENST00000427239 AKR1D1P51857 326 aa11.43□□□□□ -0.58
COL11A1-204ENST00000427239 DEFB125Q8N687 156 aa11.43□□□□□ -0.58
COL11A1-204ENST00000427239 TXNDC17Q9BRA2 123 aa11.43□□□□□ -0.58
COL11A1-204ENST00000427239 AURKAIP1Q9NWT8 199 aaPredicted RBP11.43□□□□□ -0.58
COL11A1-204ENST00000427239 GNG13Q9P2W3 67 aa11.43□□□□□ -0.58
COL11A1-204ENST00000427239 YTHDF2Q9Y5A9 579 aaKnown RBP11.43□□□□□ -0.58
COL11A1-204ENST00000427239 ZNF705FA8MVS1 300 aaPredicted RBP11.42□□□□□ -0.58
COL11A1-204ENST00000427239 F8W036 122 aa11.42□□□□□ -0.58
COL11A1-204ENST00000427239 TAGLN2P37802 199 aaKnown RBP11.42□□□□□ -0.58
COL11A1-204ENST00000427239 RPL35P42766 123 aaKnown RBP11.42□□□□□ -0.58
COL11A1-204ENST00000427239 CST9LP1Q5W188 147 aa11.42□□□□□ -0.58
COL11A1-204ENST00000427239 C5orf17Q8NAS9 161 aa11.42□□□□□ -0.58
COL11A1-204ENST00000427239 TCEAL7Q9BRU2 100 aa11.42□□□□□ -0.58
COL11A1-204ENST00000427239 A0A0J9YX75 114 aa11.41□□□□□ -0.58
COL11A1-204ENST00000427239 A8MZ25 164 aa11.41□□□□□ -0.58
COL11A1-204ENST00000427239 GGTLC3B5MD39 225 aa11.41□□□□□ -0.58
COL11A1-204ENST00000427239 ACTL10Q5JWF8 245 aa11.41□□□□□ -0.58
COL11A1-204ENST00000427239 STHQ8IWL8 128 aa11.41□□□□□ -0.58
COL11A1-204ENST00000427239 TUBA4BQ9H853 241 aa11.41□□□□□ -0.58
COL11A1-204ENST00000427239 DUSP14O95147 198 aaKnown RBP11.4□□□□□ -0.58
COL11A1-204ENST00000427239 SLC25A5P05141 298 aaKnown RBP11.4□□□□□ -0.58
COL11A1-204ENST00000427239 HLA-DRB4P13762 266 aa11.4□□□□□ -0.58
COL11A1-204ENST00000427239 ZNF124Q15973 351 aa11.4□□□□□ -0.58
COL11A1-204ENST00000427239 LCE2DQ5TA82 110 aaPredicted RBP11.4□□□□□ -0.58
COL11A1-204ENST00000427239 OR8A1Q8NGG7 326 aa11.4□□□□□ -0.58
COL11A1-204ENST00000427239 OR10J6PQ8NGY7 276 aa11.4□□□□□ -0.58
COL11A1-204ENST00000427239 WFDC10AQ9H1F0 79 aa11.4□□□□□ -0.58
COL11A1-204ENST00000427239 EPDR1Q9UM22 224 aa11.4□□□□□ -0.58
COL11A1-204ENST00000427239 HLA-DRB4X5D2U9 266 aa11.4□□□□□ -0.58
COL11A1-204ENST00000427239 MEGF8Q7Z7M0 2845 aa11.4□□□□□ -0.58
COL11A1-204ENST00000427239 SERTM2A0A1B0GWG4 89 aa11.4□□□□□ -0.58
COL11A1-204ENST00000427239 KNCNA6PVL3 124 aa11.4□□□□□ -0.58
COL11A1-204ENST00000427239 DIRC3C9JPN6 131 aa11.4□□□□□ -0.58
COL11A1-204ENST00000427239 H3BMM0 161 aa11.4□□□□□ -0.58
COL11A1-204ENST00000427239 IGHV4-30-4P0DP06 118 aa11.4□□□□□ -0.58
COL11A1-204ENST00000427239 CLUHP3Q96NS8 147 aa11.4□□□□□ -0.58
COL11A1-204ENST00000427239 SRD5A3Q9H8P0 318 aa11.4□□□□□ -0.58
COL11A1-204ENST00000427239 TMEM218A2RU14 115 aa11.39□□□□□ -0.59
COL11A1-204ENST00000427239 RBAKDNA6NC62 111 aa11.39□□□□□ -0.59
COL11A1-204ENST00000427239 C11orf94C9JXX5 98 aa11.39□□□□□ -0.59
COL11A1-204ENST00000427239 PRAC2D3DTV9 90 aa11.39□□□□□ -0.59
COL11A1-204ENST00000427239 F6UB75 175 aa11.39□□□□□ -0.59
COL11A1-204ENST00000427239 F6UZH7 168 aa11.39□□□□□ -0.59
COL11A1-204ENST00000427239 PRB2P02812 416 aaPredicted RBP11.39□□□□□ -0.59
COL11A1-204ENST00000427239 HIST1H2BAQ96A08 127 aa11.39□□□□□ -0.59
COL11A1-204ENST00000427239 VAX2Q9UIW0 290 aa11.39□□□□□ -0.59
COL11A1-204ENST00000427239 RBFOX3A6NFN3 312 aa11.38□□□□□ -0.59
COL11A1-204ENST00000427239 K7EQM0 130 aa11.38□□□□□ -0.59
COL11A1-204ENST00000427239 TCRAP04437 139 aa11.38□□□□□ -0.59
COL11A1-204ENST00000427239 BCL2P10415 239 aa11.38□□□□□ -0.59
COL11A1-204ENST00000427239 DEFB1P60022 68 aa11.38□□□□□ -0.59
COL11A1-204ENST00000427239 MEF2BQ02080 365 aaPredicted RBP11.38□□□□□ -0.59
COL11A1-204ENST00000427239 GDF5OSQ5U4N7 250 aa11.38□□□□□ -0.59
COL11A1-204ENST00000427239 CARHSP1Q9Y2V2 147 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms