RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 FXYD5Q96DB9 178 aa13.02□□□□□ -0.33
HERC3-205ENST00000426683 NEU1Q99519 415 aa13.02□□□□□ -0.33
HERC3-205ENST00000426683 SMLR1H3BR10 107 aa13.01□□□□□ -0.33
HERC3-205ENST00000426683 M0R3E3 92 aa13.01□□□□□ -0.33
HERC3-205ENST00000426683 CRXO43186 299 aaPredicted RBP13.01□□□□□ -0.33
HERC3-205ENST00000426683 M6PRP20645 277 aa13.01□□□□□ -0.33
HERC3-205ENST00000426683 TAS2R45P59539 299 aa13.01□□□□□ -0.33
HERC3-205ENST00000426683 NANOS2P60321 138 aaKnown RBP13.01□□□□□ -0.33
HERC3-205ENST00000426683 RAB2AP61019 212 aa13.01□□□□□ -0.33
HERC3-205ENST00000426683 EXOC3-AS1Q8N2X6 119 aa13.01□□□□□ -0.33
HERC3-205ENST00000426683 MRPL53Q96EL3 112 aaKnown RBP13.01□□□□□ -0.33
HERC3-205ENST00000426683 ZNF503Q96F45 646 aa13.01□□□□□ -0.33
HERC3-205ENST00000426683 PRELID1Q9Y255 219 aa13.01□□□□□ -0.33
HERC3-205ENST00000426683 TRAV12-2A0A075B6T6 113 aa13□□□□□ -0.33
HERC3-205ENST00000426683 SMIM9A6NGZ8 99 aa13□□□□□ -0.33
HERC3-205ENST00000426683 ARPC5O15511 151 aa13□□□□□ -0.33
HERC3-205ENST00000426683 EIF3GO75821 320 aaKnown RBP eCLIP13□□□□□ -0.33
HERC3-205ENST00000426683 INSP01308 110 aa13□□□□□ -0.33
HERC3-205ENST00000426683 ATP6V0CP27449 155 aa13□□□□□ -0.33
HERC3-205ENST00000426683 KHDC3LQ587J8 217 aa13□□□□□ -0.33
HERC3-205ENST00000426683 FAM122CQ6P4D5 195 aa13□□□□□ -0.33
HERC3-205ENST00000426683 BAP18Q8IXM2 172 aa13□□□□□ -0.33
HERC3-205ENST00000426683 PSMG3Q9BT73 122 aaPredicted RBP13□□□□□ -0.33
HERC3-205ENST00000426683 TMEM208Q9BTX3 173 aa13□□□□□ -0.33
HERC3-205ENST00000426683 AAMDCQ9H7C9 122 aa13□□□□□ -0.33
HERC3-205ENST00000426683 A0A1W2PPV4 95 aa12.99□□□□□ -0.33
HERC3-205ENST00000426683 UBE2L3P68036 154 aaKnown RBP12.99□□□□□ -0.33
HERC3-205ENST00000426683 ICAM4Q14773 271 aa12.99□□□□□ -0.33
HERC3-205ENST00000426683 RPL7L1Q6DKI1 246 aaKnown RBP12.99□□□□□ -0.33
HERC3-205ENST00000426683 OR10G4Q8NGN3 311 aa12.99□□□□□ -0.33
HERC3-205ENST00000426683 OR10G9Q8NGN4 311 aa12.99□□□□□ -0.33
HERC3-205ENST00000426683 OR10G7Q8NGN6 311 aa12.99□□□□□ -0.33
HERC3-205ENST00000426683 OR2G3Q8NGZ4 309 aa12.99□□□□□ -0.33
HERC3-205ENST00000426683 CSMD3Q7Z407 3707 aa12.98□□□□□ -0.33
HERC3-205ENST00000426683 BORCS7-ASMTA0A0B4J1R7 106 aa12.98□□□□□ -0.33
HERC3-205ENST00000426683 NUPR2A6NF83 97 aa12.98□□□□□ -0.33
HERC3-205ENST00000426683 CDKN1BP46527 198 aa12.98□□□□□ -0.33
HERC3-205ENST00000426683 CEMP1Q6PRD7 247 aaPredicted RBP12.98□□□□□ -0.33
HERC3-205ENST00000426683 PHLDA1Q8WV24 401 aaPredicted RBP12.98□□□□□ -0.33
HERC3-205ENST00000426683 PHYHIPLQ96FC7 376 aa12.98□□□□□ -0.33
HERC3-205ENST00000426683 SH3BGRL3Q9H299 93 aa12.98□□□□□ -0.33
HERC3-205ENST00000426683 NPIPB6E9PJ23 425 aa12.97□□□□□ -0.33
HERC3-205ENST00000426683 HBE1P02100 147 aa12.97□□□□□ -0.33
HERC3-205ENST00000426683 RPP25LQ8N5L8 163 aaKnown RBP12.97□□□□□ -0.33
HERC3-205ENST00000426683 EMP1P54849 157 aa12.96□□□□□ -0.33
HERC3-205ENST00000426683 RANP62826 216 aaKnown RBP12.96□□□□□ -0.33
HERC3-205ENST00000426683 SERF2P84101 59 aa12.96□□□□□ -0.33
HERC3-205ENST00000426683 RRN3P1Q2M238 152 aa12.96□□□□□ -0.33
HERC3-205ENST00000426683 CELA1Q9UNI1 258 aa12.96□□□□□ -0.33
HERC3-205ENST00000426683 DYNC2H1Q8NCM8 4307 aaKnown RBP12.96□□□□□ -0.33
HERC3-205ENST00000426683 LOC102723971A0A1B0GUV8 181 aa12.95□□□□□ -0.34
HERC3-205ENST00000426683 TMEM189A5PLL7 270 aa12.95□□□□□ -0.34
HERC3-205ENST00000426683 HMGB3O15347 200 aaKnown RBP12.95□□□□□ -0.34
HERC3-205ENST00000426683 MBP02144 154 aa12.95□□□□□ -0.34
HERC3-205ENST00000426683 CT45A10P0DMU9 189 aa12.95□□□□□ -0.34
HERC3-205ENST00000426683 TSPOP30536 169 aa12.95□□□□□ -0.34
HERC3-205ENST00000426683 CDC34P49427 236 aaPredicted RBP12.95□□□□□ -0.34
HERC3-205ENST00000426683 ERCC8Q13216 396 aa12.95□□□□□ -0.34
HERC3-205ENST00000426683 PQLC2Q6ZP29 291 aa12.95□□□□□ -0.34
HERC3-205ENST00000426683 GNPNAT1Q96EK6 184 aaPredicted RBP12.95□□□□□ -0.34
HERC3-205ENST00000426683 KLK5Q9Y337 293 aaPredicted RBP12.95□□□□□ -0.34
HERC3-205ENST00000426683 TAAR5O14804 337 aa12.94□□□□□ -0.34
HERC3-205ENST00000426683 LEPP41159 167 aa12.94□□□□□ -0.34
HERC3-205ENST00000426683 KIR3DS1Q14943 382 aa12.94□□□□□ -0.34
HERC3-205ENST00000426683 LYPD1Q8N2G4 141 aa12.94□□□□□ -0.34
HERC3-205ENST00000426683 ODF3Q96PU9 254 aa12.94□□□□□ -0.34
HERC3-205ENST00000426683 LINC01587Q99440 93 aa12.94□□□□□ -0.34
HERC3-205ENST00000426683 Q9H3A6 140 aa12.94□□□□□ -0.34
HERC3-205ENST00000426683 RYR3Q15413 4870 aa12.94□□□□□ -0.34
HERC3-205ENST00000426683 IGKV2-40A0A087WW87 121 aaPredicted RBP12.93□□□□□ -0.34
HERC3-205ENST00000426683 LCE6AA0A183 80 aa12.93□□□□□ -0.34
HERC3-205ENST00000426683 ZNF705GA8MUZ8 300 aaPredicted RBP12.93□□□□□ -0.34
HERC3-205ENST00000426683 J3KRW8 73 aa12.93□□□□□ -0.34
HERC3-205ENST00000426683 JTBO76095 146 aa12.93□□□□□ -0.34
HERC3-205ENST00000426683 IGKV2D-40P01614 121 aaPredicted RBP12.93□□□□□ -0.34
HERC3-205ENST00000426683 PRM2P04554 102 aa12.93□□□□□ -0.34
HERC3-205ENST00000426683 ZNF767PQ75MW2 155 aa12.93□□□□□ -0.34
HERC3-205ENST00000426683 TMEM256Q8N2U0 113 aa12.93□□□□□ -0.34
HERC3-205ENST00000426683 OR11H4Q8NGC9 324 aa12.93□□□□□ -0.34
HERC3-205ENST00000426683 LINC00477Q96M19 166 aa12.93□□□□□ -0.34
HERC3-205ENST00000426683 AGPAT4-IT1Q9H0P7 198 aa12.93□□□□□ -0.34
HERC3-205ENST00000426683 CYTL1Q9NRR1 136 aa12.93□□□□□ -0.34
HERC3-205ENST00000426683 STAG3L2P0CL84 134 aa12.92□□□□□ -0.34
HERC3-205ENST00000426683 STAG3L3P0CL85 134 aa12.92□□□□□ -0.34
HERC3-205ENST00000426683 SPART-AS1P0CW21 52 aa12.92□□□□□ -0.34
HERC3-205ENST00000426683 CSN1S1P47710 185 aa12.92□□□□□ -0.34
HERC3-205ENST00000426683 C12orf74Q32Q52 190 aa12.92□□□□□ -0.34
HERC3-205ENST00000426683 GFI1BQ5VTD9 330 aa12.92□□□□□ -0.34
HERC3-205ENST00000426683 Q6ZTC4 211 aa12.92□□□□□ -0.34
HERC3-205ENST00000426683 RAB24Q969Q5 203 aa12.92□□□□□ -0.34
HERC3-205ENST00000426683 PLECQ15149 4684 aaKnown RBP12.92□□□□□ -0.34
HERC3-205ENST00000426683 SACSQ9NZJ4 4579 aa12.92□□□□□ -0.34
HERC3-205ENST00000426683 HMSDA8MTL9 139 aa12.91□□□□□ -0.34
HERC3-205ENST00000426683 ARL14EPLP0DKL9 152 aa12.91□□□□□ -0.34
HERC3-205ENST00000426683 TAS2R60P59551 318 aa12.91□□□□□ -0.34
HERC3-205ENST00000426683 ZNF345Q14585 488 aa12.91□□□□□ -0.34
HERC3-205ENST00000426683 C9orf47Q6ZRZ4 202 aa12.91□□□□□ -0.34
HERC3-205ENST00000426683 KCNRGQ8N5I3 272 aa12.91□□□□□ -0.34
HERC3-205ENST00000426683 VGLL1Q99990 258 aa12.91□□□□□ -0.34
HERC3-205ENST00000426683 ARPC5LQ9BPX5 153 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms