RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 ZMAT5Q9UDW3 170 aaKnown RBP4.22□□□□□ -1.73
HERPUD2-204ENST00000426180 PLA2G2DQ9UNK4 145 aa4.22□□□□□ -1.73
HERPUD2-204ENST00000426180 A0A1W2PPV4 95 aa4.21□□□□□ -1.74
HERPUD2-204ENST00000426180 PRAC2D3DTV9 90 aa4.21□□□□□ -1.74
HERPUD2-204ENST00000426180 ISLRO14498 428 aa4.21□□□□□ -1.74
HERPUD2-204ENST00000426180 OR7C2O60412 319 aa4.21□□□□□ -1.74
HERPUD2-204ENST00000426180 MBP02144 154 aa4.21□□□□□ -1.74
HERPUD2-204ENST00000426180 NBEAP1P0C6P0 100 aa4.21□□□□□ -1.74
HERPUD2-204ENST00000426180 FRMD6-AS1P0C7T7 363 aa4.21□□□□□ -1.74
HERPUD2-204ENST00000426180 ZNF705DP0CH99 300 aaPredicted RBP4.21□□□□□ -1.74
HERPUD2-204ENST00000426180 ZNF705BP0CI00 300 aaPredicted RBP4.21□□□□□ -1.74
HERPUD2-204ENST00000426180 STAG3L2P0CL84 134 aa4.21□□□□□ -1.74
HERPUD2-204ENST00000426180 STAG3L3P0CL85 134 aa4.21□□□□□ -1.74
HERPUD2-204ENST00000426180 ARL14EPLP0DKL9 152 aa4.21□□□□□ -1.74
HERPUD2-204ENST00000426180 HIST1H1EP10412 219 aaKnown RBP4.21□□□□□ -1.74
HERPUD2-204ENST00000426180 RPL35AP18077 110 aaKnown RBP4.21□□□□□ -1.74
HERPUD2-204ENST00000426180 S100A7P31151 101 aa4.21□□□□□ -1.74
HERPUD2-204ENST00000426180 PSMB3P49720 205 aa4.21□□□□□ -1.74
HERPUD2-204ENST00000426180 UBE2L3P68036 154 aaKnown RBP4.21□□□□□ -1.74
HERPUD2-204ENST00000426180 KHDC3LQ587J8 217 aa4.21□□□□□ -1.74
HERPUD2-204ENST00000426180 AKR1C8PQ5T2L2 129 aa4.21□□□□□ -1.74
HERPUD2-204ENST00000426180 LCN15Q6UWW0 184 aa4.21□□□□□ -1.74
HERPUD2-204ENST00000426180 LINC00322Q6ZN03 302 aaPredicted RBP4.21□□□□□ -1.74
HERPUD2-204ENST00000426180 EXOC3-AS1Q8N2X6 119 aa4.21□□□□□ -1.74
HERPUD2-204ENST00000426180 FAM213BQ8TBF2 198 aa4.21□□□□□ -1.74
HERPUD2-204ENST00000426180 ASCL2Q99929 193 aa4.21□□□□□ -1.74
HERPUD2-204ENST00000426180 ACTR3CQ9C0K3 210 aaPredicted RBP4.21□□□□□ -1.74
HERPUD2-204ENST00000426180 HRH4Q9H3N8 390 aa4.21□□□□□ -1.74
HERPUD2-204ENST00000426180 ZNF331Q9NQX6 463 aaPredicted RBP4.21□□□□□ -1.74
HERPUD2-204ENST00000426180 A0A0J9YX75 114 aa4.2□□□□□ -1.74
HERPUD2-204ENST00000426180 CTXND1A0A1B0GTU2 59 aa4.2□□□□□ -1.74
HERPUD2-204ENST00000426180 A0A1B0GV50 99 aa4.2□□□□□ -1.74
HERPUD2-204ENST00000426180 MAP1LC3B2A6NCE7 125 aa4.2□□□□□ -1.74
HERPUD2-204ENST00000426180 A8MZ25 164 aa4.2□□□□□ -1.74
HERPUD2-204ENST00000426180 H3BMM0 161 aa4.2□□□□□ -1.74
HERPUD2-204ENST00000426180 M0R3E3 92 aa4.2□□□□□ -1.74
HERPUD2-204ENST00000426180 GCHFRP30047 84 aa4.2□□□□□ -1.74
HERPUD2-204ENST00000426180 ID1P41134 155 aa4.2□□□□□ -1.74
HERPUD2-204ENST00000426180 MEOX2P50222 304 aa4.2□□□□□ -1.74
HERPUD2-204ENST00000426180 TAS2R45P59539 299 aa4.2□□□□□ -1.74
HERPUD2-204ENST00000426180 SNRPD3P62318 126 aaKnown RBP4.2□□□□□ -1.74
HERPUD2-204ENST00000426180 EIF5AP63241 154 aaKnown RBP4.2□□□□□ -1.74
HERPUD2-204ENST00000426180 CCL20P78556 96 aa4.2□□□□□ -1.74
HERPUD2-204ENST00000426180 PSG3Q16557 428 aa4.2□□□□□ -1.74
HERPUD2-204ENST00000426180 ACTL10Q5JWF8 245 aa4.2□□□□□ -1.74
HERPUD2-204ENST00000426180 ALKAL2Q6UX46 152 aa4.2□□□□□ -1.74
HERPUD2-204ENST00000426180 SBSPONQ8IVN8 264 aa4.2□□□□□ -1.74
HERPUD2-204ENST00000426180 SUN5Q8TC36 379 aa4.2□□□□□ -1.74
HERPUD2-204ENST00000426180 LRRC20Q8TCA0 184 aa4.2□□□□□ -1.74
HERPUD2-204ENST00000426180 FAM110AQ9BQ89 295 aa4.2□□□□□ -1.74
HERPUD2-204ENST00000426180 MAP1LC3BQ9GZQ8 125 aa4.2□□□□□ -1.74
HERPUD2-204ENST00000426180 TUBA4BQ9H853 241 aa4.2□□□□□ -1.74
HERPUD2-204ENST00000426180 UMAD1C9J7I0 102 aa4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 ZNF253O75346 499 aa4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 CXorf1O96002 111 aa4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 IGKV3-20P01619 116 aa4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 GIG44P09565 113 aaPredicted RBP4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 HLA-DRB4P13762 266 aa4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 SULT1A2P50226 295 aa4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 CMC4P56277 68 aaPredicted RBP4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 FXYD7P58549 80 aa4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 UBE2G2P60604 165 aa4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 RANP62826 216 aaKnown RBP4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 ERCC8Q13216 396 aa4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 ICAM4Q14773 271 aa4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 GUK1Q16774 197 aa4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 HAGHQ16775 308 aa4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 PQLC2Q6ZP29 291 aa4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 TRPT1Q86TN4 253 aaKnown RBP4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 IQCF2Q8IXL9 164 aa4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 ZNF738Q8NE65 137 aa4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 SFT2D1Q8WV19 159 aa4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 MBD3L1Q8WWY6 194 aa4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 RPUSD4Q96CM3 377 aaKnown RBP4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 C8orf49Q96NF6 230 aa4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 SLC50A1Q9BRV3 221 aa4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 Q9H3A6 140 aa4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 SAV1Q9H4B6 383 aaPredicted RBP4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 RETNQ9HD89 108 aa4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 RNF24Q9Y225 148 aa4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 YTHDF2Q9Y5A9 579 aaKnown RBP4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 HLA-DRB4X5D2U9 266 aa4.19□□□□□ -1.74
HERPUD2-204ENST00000426180 IGKV2-40A0A087WW87 121 aaPredicted RBP4.18□□□□□ -1.74
HERPUD2-204ENST00000426180 LOC102724200A0A096LPH7 203 aaPredicted RBP4.18□□□□□ -1.74
HERPUD2-204ENST00000426180 PGPA6NDG6 321 aa4.18□□□□□ -1.74
HERPUD2-204ENST00000426180 A8MTW9 85 aa4.18□□□□□ -1.74
HERPUD2-204ENST00000426180 GGTLC3B5MD39 225 aa4.18□□□□□ -1.74
HERPUD2-204ENST00000426180 IGKV2D-40P01614 121 aaPredicted RBP4.18□□□□□ -1.74
HERPUD2-204ENST00000426180 C4BPBP20851 252 aa4.18□□□□□ -1.74
HERPUD2-204ENST00000426180 GNG5P63218 68 aa4.18□□□□□ -1.74
HERPUD2-204ENST00000426180 PSG9Q00887 426 aa4.18□□□□□ -1.74
HERPUD2-204ENST00000426180 HIST1H1AQ02539 215 aaPredicted RBP4.18□□□□□ -1.74
HERPUD2-204ENST00000426180 PDE6HQ13956 83 aa4.18□□□□□ -1.74
HERPUD2-204ENST00000426180 AMTNQ6UX39 209 aa4.18□□□□□ -1.74
HERPUD2-204ENST00000426180 DPPA3Q6W0C5 159 aa4.18□□□□□ -1.74
HERPUD2-204ENST00000426180 FOXI2Q6ZQN5 318 aa4.18□□□□□ -1.74
HERPUD2-204ENST00000426180 STHQ8IWL8 128 aa4.18□□□□□ -1.74
HERPUD2-204ENST00000426180 OR4B1Q8NGF8 309 aa4.18□□□□□ -1.74
HERPUD2-204ENST00000426180 OR8A1Q8NGG7 326 aa4.18□□□□□ -1.74
HERPUD2-204ENST00000426180 PCNPQ8WW12 178 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms