RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
SF3B1-205ENST00000424674 ATG5Q9H1Y0 275 aa2.41□□□□□ -2.02
SF3B1-205ENST00000424674 TNFRSF19Q9NS68 423 aa2.41□□□□□ -2.02
SF3B1-205ENST00000424674 TMEM106BQ9NUM4 274 aa2.41□□□□□ -2.02
SF3B1-205ENST00000424674 FAM215AQ9Y5M1 114 aa2.41□□□□□ -2.02
SF3B1-205ENST00000424674 OBSL1O75147 1896 aa2.41□□□□□ -2.02
SF3B1-205ENST00000424674 COL18A1P39060 1754 aa2.41□□□□□ -2.02
SF3B1-205ENST00000424674 NCKAP5O14513 1909 aa2.4□□□□□ -2.02
SF3B1-205ENST00000424674 GLI3P10071 1580 aa2.4□□□□□ -2.02
SF3B1-205ENST00000424674 RPRD2Q5VT52 1461 aaKnown RBP2.4□□□□□ -2.02
SF3B1-205ENST00000424674 TRAV7A0A075B6U4 112 aa2.4□□□□□ -2.03
SF3B1-205ENST00000424674 TRBV10-2A0A0K0K1G8 114 aa2.4□□□□□ -2.03
SF3B1-205ENST00000424674 MDFIC2A0A1B0GVS7 189 aa2.4□□□□□ -2.03
SF3B1-205ENST00000424674 H3BQ15 152 aa2.4□□□□□ -2.03
SF3B1-205ENST00000424674 H3BQ85 93 aa2.4□□□□□ -2.03
SF3B1-205ENST00000424674 PITX3O75364 302 aa2.4□□□□□ -2.03
SF3B1-205ENST00000424674 PEBP1P30086 187 aaKnown RBP2.4□□□□□ -2.03
SF3B1-205ENST00000424674 RPS10P46783 165 aaKnown RBP2.4□□□□□ -2.03
SF3B1-205ENST00000424674 NPC2P61916 151 aa2.4□□□□□ -2.03
SF3B1-205ENST00000424674 SS18Q15532 418 aa2.4□□□□□ -2.03
SF3B1-205ENST00000424674 LPAL2Q16609 132 aa2.4□□□□□ -2.03
SF3B1-205ENST00000424674 DEFB116Q30KQ4 102 aa2.4□□□□□ -2.03
SF3B1-205ENST00000424674 C2orf83Q53S99 150 aa2.4□□□□□ -2.03
SF3B1-205ENST00000424674 C12orf73Q69YU5 71 aa2.4□□□□□ -2.03
SF3B1-205ENST00000424674 KRTAP5-4Q6L8H1 288 aa2.4□□□□□ -2.03
SF3B1-205ENST00000424674 LYZL1Q6UWQ5 148 aa2.4□□□□□ -2.03
SF3B1-205ENST00000424674 Q6ZS92 163 aa2.4□□□□□ -2.03
SF3B1-205ENST00000424674 LINC00471Q8N535 108 aa2.4□□□□□ -2.03
SF3B1-205ENST00000424674 TMEM105Q8N8V8 129 aa2.4□□□□□ -2.03
SF3B1-205ENST00000424674 OR2T35Q8NGX2 323 aa2.4□□□□□ -2.03
SF3B1-205ENST00000424674 ATP6V0E2Q8NHE4 81 aa2.4□□□□□ -2.03
SF3B1-205ENST00000424674 SMAD5-AS1Q9Y6J3 95 aa2.4□□□□□ -2.03
SF3B1-205ENST00000424674 MAP3K1Q13233 1512 aa2.4□□□□□ -2.03
SF3B1-205ENST00000424674 KDM5AP29375 1690 aaKnown RBP2.4□□□□□ -2.03
SF3B1-205ENST00000424674 LRP4O75096 1905 aa2.4□□□□□ -2.03
SF3B1-205ENST00000424674 ADGRB1O14514 1584 aa2.4□□□□□ -2.03
SF3B1-205ENST00000424674 PCNX3Q9H6A9 2034 aa2.39□□□□□ -2.03
SF3B1-205ENST00000424674 KDM5DQ9BY66 1539 aa2.39□□□□□ -2.03
SF3B1-205ENST00000424674 QRICH2Q9H0J4 1663 aa2.39□□□□□ -2.03
SF3B1-205ENST00000424674 IGKV1D-37A0A075B6S9 117 aa2.39□□□□□ -2.03
SF3B1-205ENST00000424674 C17orf98A8MV24 154 aa2.39□□□□□ -2.03
SF3B1-205ENST00000424674 OOSP1A8MZH6 123 aa2.39□□□□□ -2.03
SF3B1-205ENST00000424674 H7C2G1 150 aa2.39□□□□□ -2.03
SF3B1-205ENST00000424674 SSSCA1O60232 199 aa2.39□□□□□ -2.03
SF3B1-205ENST00000424674 EDF1O60869 148 aaKnown RBP2.39□□□□□ -2.03
SF3B1-205ENST00000424674 ZNF737O75373 536 aa2.39□□□□□ -2.03
SF3B1-205ENST00000424674 SHBGP04278 402 aa2.39□□□□□ -2.03
SF3B1-205ENST00000424674 CISD3P0C7P0 127 aa2.39□□□□□ -2.03
SF3B1-205ENST00000424674 IL7P13232 177 aa2.39□□□□□ -2.03
SF3B1-205ENST00000424674 COL8A2P25067 703 aa2.39□□□□□ -2.03
SF3B1-205ENST00000424674 DCDP81605 110 aaKnown RBP2.39□□□□□ -2.03
SF3B1-205ENST00000424674 MIC13Q5XKP0 118 aa2.39□□□□□ -2.03
SF3B1-205ENST00000424674 CYB561D1Q8N8Q1 229 aa2.39□□□□□ -2.03
SF3B1-205ENST00000424674 CLEC2BQ92478 149 aa2.39□□□□□ -2.03
SF3B1-205ENST00000424674 NABP2Q9BQ15 211 aa2.39□□□□□ -2.03
SF3B1-205ENST00000424674 TMEM242Q9NWH2 141 aa2.39□□□□□ -2.03
SF3B1-205ENST00000424674 PHIPQ8WWQ0 1821 aa2.39□□□□□ -2.03
SF3B1-205ENST00000424674 ARHGEF28Q8N1W1 1705 aaKnown RBP2.39□□□□□ -2.03
SF3B1-205ENST00000424674 ANKRD26Q9UPS8 1709 aa2.39□□□□□ -2.03
SF3B1-205ENST00000424674 HCFC1P51610 2035 aa2.39□□□□□ -2.03
SF3B1-205ENST00000424674 N4BP2Q86UW6 1770 aaPredicted RBP2.38□□□□□ -2.03
SF3B1-205ENST00000424674 MYH7BA7E2Y1 1941 aa2.38□□□□□ -2.03
SF3B1-205ENST00000424674 NUP98P52948 1817 aa2.38□□□□□ -2.03
SF3B1-205ENST00000424674 EML6Q6ZMW3 1958 aa2.38□□□□□ -2.03
SF3B1-205ENST00000424674 PIGBOS1A0A0B4J2F0 54 aa2.38□□□□□ -2.03
SF3B1-205ENST00000424674 IGHV1-24A0A0C4DH33 117 aa2.38□□□□□ -2.03
SF3B1-205ENST00000424674 RTEL1-TNFRSF6BF6WH68 1400 aa2.38□□□□□ -2.03
SF3B1-205ENST00000424674 RPL36A-HNRNPH2H7BZ11 118 aa2.38□□□□□ -2.03
SF3B1-205ENST00000424674 DSCAMO60469 2012 aa2.38□□□□□ -2.03
SF3B1-205ENST00000424674 SNCGO76070 127 aa2.38□□□□□ -2.03
SF3B1-205ENST00000424674 IL4P05112 153 aa2.38□□□□□ -2.03
SF3B1-205ENST00000424674 DNAH10OSP0CZ25 163 aa2.38□□□□□ -2.03
SF3B1-205ENST00000424674 ZNF816Q0VGE8 651 aaPredicted RBP2.38□□□□□ -2.03
SF3B1-205ENST00000424674 FAM229BQ4G0N7 80 aa2.38□□□□□ -2.03
SF3B1-205ENST00000424674 C1orf64Q8NEQ6 169 aa2.38□□□□□ -2.03
SF3B1-205ENST00000424674 VSTM2AQ8TAG5 236 aa2.38□□□□□ -2.03
SF3B1-205ENST00000424674 TSKUQ8WUA8 353 aa2.38□□□□□ -2.03
SF3B1-205ENST00000424674 SPTSSAQ969W0 71 aa2.38□□□□□ -2.03
SF3B1-205ENST00000424674 Q96M85 177 aa2.38□□□□□ -2.03
SF3B1-205ENST00000424674 RETNLBQ9BQ08 111 aa2.38□□□□□ -2.03
SF3B1-205ENST00000424674 SLC50A1Q9BRV3 221 aa2.38□□□□□ -2.03
SF3B1-205ENST00000424674 LINC00312Q9Y6C7 94 aa2.38□□□□□ -2.03
SF3B1-205ENST00000424674 FYCO1Q9BQS8 1478 aa2.38□□□□□ -2.03
SF3B1-205ENST00000424674 BCORL1Q5H9F3 1711 aa2.37□□□□□ -2.03
SF3B1-205ENST00000424674 hDV103S1A0JD37 113 aa2.37□□□□□ -2.03
SF3B1-205ENST00000424674 COLCA2A8K830 154 aa2.37□□□□□ -2.03
SF3B1-205ENST00000424674 ZNF705FA8MVS1 300 aaPredicted RBP2.37□□□□□ -2.03
SF3B1-205ENST00000424674 E7EQL1 145 aa2.37□□□□□ -2.03
SF3B1-205ENST00000424674 J3QLW9 94 aa2.37□□□□□ -2.03
SF3B1-205ENST00000424674 GNRH2O43555 120 aa2.37□□□□□ -2.03
SF3B1-205ENST00000424674 NDUFB6O95139 128 aa2.37□□□□□ -2.03
SF3B1-205ENST00000424674 TRAPPC2P0DI81 140 aa2.37□□□□□ -2.03
SF3B1-205ENST00000424674 TRAPPC2BP0DI82 140 aa2.37□□□□□ -2.03
SF3B1-205ENST00000424674 PIPP12273 146 aaPredicted RBP2.37□□□□□ -2.03
SF3B1-205ENST00000424674 COX7CP15954 63 aa2.37□□□□□ -2.03
SF3B1-205ENST00000424674 Q0VG73 95 aa2.37□□□□□ -2.03
SF3B1-205ENST00000424674 FOXF1Q12946 379 aa2.37□□□□□ -2.03
SF3B1-205ENST00000424674 IQCJQ1A5X6 159 aa2.37□□□□□ -2.03
SF3B1-205ENST00000424674 ESRGQ1W209 222 aa2.37□□□□□ -2.03
SF3B1-205ENST00000424674 ST20-AS1Q8NBB2 130 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms