RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 PET117Q6UWS5 81 aa7.05□□□□□ -1.28
SNX20-203ENST00000423026 EEF1AKMT3Q96AZ1 226 aa7.05□□□□□ -1.28
SNX20-203ENST00000423026 LINC00479Q96M42 142 aa7.05□□□□□ -1.28
SNX20-203ENST00000423026 LRRK2Q5S007 2527 aa7.05□□□□□ -1.28
SNX20-203ENST00000423026 ANKRD17O75179 2603 aaKnown RBP7.05□□□□□ -1.28
SNX20-203ENST00000423026 TRAV41A0A0B4J266 112 aa7.05□□□□□ -1.28
SNX20-203ENST00000423026 LINC01548A6NM66 108 aa7.05□□□□□ -1.28
SNX20-203ENST00000423026 ISLRO14498 428 aa7.05□□□□□ -1.28
SNX20-203ENST00000423026 AMY1AP04745 511 aa7.05□□□□□ -1.28
SNX20-203ENST00000423026 GNG5P63218 68 aa7.05□□□□□ -1.28
SNX20-203ENST00000423026 LY6EQ16553 131 aa7.05□□□□□ -1.28
SNX20-203ENST00000423026 OR8I2Q8N0Y5 310 aa7.05□□□□□ -1.28
SNX20-203ENST00000423026 LYPD1Q8N2G4 141 aa7.05□□□□□ -1.28
SNX20-203ENST00000423026 ZNF502Q8TBZ5 544 aa7.05□□□□□ -1.28
SNX20-203ENST00000423026 TSKUQ8WUA8 353 aa7.05□□□□□ -1.28
SNX20-203ENST00000423026 RCHY1Q96PM5 261 aa7.05□□□□□ -1.28
SNX20-203ENST00000423026 RABAC1Q9UI14 185 aa7.05□□□□□ -1.28
SNX20-203ENST00000423026 UBR5O95071 2799 aaPredicted RBP7.05□□□□□ -1.28
SNX20-203ENST00000423026 TRBV7-1A0A0A6YYK4 115 aa7.04□□□□□ -1.28
SNX20-203ENST00000423026 A6NDX4 124 aa7.04□□□□□ -1.28
SNX20-203ENST00000423026 H3BTX0 84 aa7.04□□□□□ -1.28
SNX20-203ENST00000423026 BMPR1BO00238 502 aa7.04□□□□□ -1.28
SNX20-203ENST00000423026 TGFAP01135 160 aa7.04□□□□□ -1.28
SNX20-203ENST00000423026 CLEC3BP05452 202 aa7.04□□□□□ -1.28
SNX20-203ENST00000423026 COL8A1P27658 744 aa7.04□□□□□ -1.28
SNX20-203ENST00000423026 GPR183P32249 361 aa7.04□□□□□ -1.28
SNX20-203ENST00000423026 LOXL1Q08397 574 aaPredicted RBP7.04□□□□□ -1.28
SNX20-203ENST00000423026 IBA57Q5T440 356 aaKnown RBP7.04□□□□□ -1.28
SNX20-203ENST00000423026 RASL11AQ6T310 242 aa7.04□□□□□ -1.28
SNX20-203ENST00000423026 LRRC75A-AS1Q8N1F1 130 aa7.04□□□□□ -1.28
SNX20-203ENST00000423026 FMC1Q96HJ9 113 aa7.04□□□□□ -1.28
SNX20-203ENST00000423026 KLF12Q9Y4X4 402 aa7.04□□□□□ -1.28
SNX20-203ENST00000423026 TRBV19A0A075B6N1 114 aa7.03□□□□□ -1.28
SNX20-203ENST00000423026 J3QKU1 62 aa7.03□□□□□ -1.28
SNX20-203ENST00000423026 IGLV2-8P01709 118 aa7.03□□□□□ -1.28
SNX20-203ENST00000423026 TCRAP04437 139 aa7.03□□□□□ -1.28
SNX20-203ENST00000423026 RPL7P18124 248 aaKnown RBP7.03□□□□□ -1.28
SNX20-203ENST00000423026 SRIP30626 198 aa7.03□□□□□ -1.28
SNX20-203ENST00000423026 CRIP2P52943 208 aaPredicted RBP7.03□□□□□ -1.28
SNX20-203ENST00000423026 ATP5G2Q06055 141 aa7.03□□□□□ -1.28
SNX20-203ENST00000423026 DEFB113Q30KQ7 82 aa7.03□□□□□ -1.28
SNX20-203ENST00000423026 GPR82Q96P67 336 aa7.03□□□□□ -1.28
SNX20-203ENST00000423026 CHRDL1Q9BU40 450 aa7.03□□□□□ -1.28
SNX20-203ENST00000423026 RNASE7Q9H1E1 156 aaKnown RBP7.03□□□□□ -1.28
SNX20-203ENST00000423026 SERTAD4Q9NUC0 356 aa7.03□□□□□ -1.28
SNX20-203ENST00000423026 MAST4O15021 2626 aa7.03□□□□□ -1.28
SNX20-203ENST00000423026 CRYBG3Q68DQ2 2970 aa7.03□□□□□ -1.28
SNX20-203ENST00000423026 FAM223BA6NKX1 122 aa7.03□□□□□ -1.28
SNX20-203ENST00000423026 K7EQM0 130 aa7.03□□□□□ -1.28
SNX20-203ENST00000423026 AVPP01185 164 aa7.03□□□□□ -1.28
SNX20-203ENST00000423026 RIPPLY3P57055 190 aa7.03□□□□□ -1.28
SNX20-203ENST00000423026 AMMECR1LQ6DCA0 310 aa7.03□□□□□ -1.28
SNX20-203ENST00000423026 CLEC19AQ6UXS0 136 aa7.03□□□□□ -1.28
SNX20-203ENST00000423026 TCF24Q7RTU0 167 aa7.03□□□□□ -1.28
SNX20-203ENST00000423026 FAM223AQ8IWN6 122 aa7.03□□□□□ -1.28
SNX20-203ENST00000423026 WIPF2Q8TF74 440 aaPredicted RBP7.03□□□□□ -1.28
SNX20-203ENST00000423026 ST20Q9HBF5 79 aa7.03□□□□□ -1.28
SNX20-203ENST00000423026 SOX21Q9Y651 276 aaPredicted RBP7.03□□□□□ -1.28
SNX20-203ENST00000423026 UTP20O75691 2785 aaKnown RBP7.02□□□□□ -1.28
SNX20-203ENST00000423026 A0A096LNT2 108 aa7.02□□□□□ -1.29
SNX20-203ENST00000423026 LOC102724200A0A096LPH7 203 aaPredicted RBP7.02□□□□□ -1.29
SNX20-203ENST00000423026 FAM181BA6NEQ2 426 aa7.02□□□□□ -1.29
SNX20-203ENST00000423026 RNF223E7ERA6 249 aa7.02□□□□□ -1.29
SNX20-203ENST00000423026 TAX1BP3O14907 124 aa7.02□□□□□ -1.29
SNX20-203ENST00000423026 APCSP02743 223 aa7.02□□□□□ -1.29
SNX20-203ENST00000423026 IGF1P05019 195 aa7.02□□□□□ -1.29
SNX20-203ENST00000423026 RAB9AP51151 201 aa7.02□□□□□ -1.29
SNX20-203ENST00000423026 KRTAP10-9P60411 292 aa7.02□□□□□ -1.29
SNX20-203ENST00000423026 PDE6HQ13956 83 aa7.02□□□□□ -1.29
SNX20-203ENST00000423026 FAM231DQ6ZW35 169 aa7.02□□□□□ -1.29
SNX20-203ENST00000423026 EXOC3-AS1Q8N2X6 119 aa7.02□□□□□ -1.29
SNX20-203ENST00000423026 DEFB125Q8N687 156 aa7.02□□□□□ -1.29
SNX20-203ENST00000423026 NHLRC2Q8NBF2 726 aa7.02□□□□□ -1.29
SNX20-203ENST00000423026 ZNF414Q96IQ9 312 aa7.02□□□□□ -1.29
SNX20-203ENST00000423026 CLUHP3Q96NS8 147 aa7.02□□□□□ -1.29
SNX20-203ENST00000423026 ATP6V0BQ99437 205 aa7.02□□□□□ -1.29
SNX20-203ENST00000423026 AAMDCQ9H7C9 122 aa7.02□□□□□ -1.29
SNX20-203ENST00000423026 SMIM27A0A1W2PRY6 76 aa7.02□□□□□ -1.29
SNX20-203ENST00000423026 MRPS12O15235 138 aaKnown RBP7.02□□□□□ -1.29
SNX20-203ENST00000423026 IGHG2P01859 326 aa7.02□□□□□ -1.29
SNX20-203ENST00000423026 TRGV3P03979 118 aa7.02□□□□□ -1.29
SNX20-203ENST00000423026 FRMD6-AS1P0C7T7 363 aa7.02□□□□□ -1.29
SNX20-203ENST00000423026 IGLL1P15814 213 aa7.02□□□□□ -1.29
SNX20-203ENST00000423026 PSG9Q00887 426 aa7.02□□□□□ -1.29
SNX20-203ENST00000423026 KLF5Q13887 457 aaPredicted RBP7.02□□□□□ -1.29
SNX20-203ENST00000423026 FAM162BQ5T6X4 162 aa7.02□□□□□ -1.29
SNX20-203ENST00000423026 C12orf54Q6X4T0 127 aa7.02□□□□□ -1.29
SNX20-203ENST00000423026 G3V4G9 280 aa7.01□□□□□ -1.29
SNX20-203ENST00000423026 H3BUA1 57 aa7.01□□□□□ -1.29
SNX20-203ENST00000423026 NTF3P20783 257 aa7.01□□□□□ -1.29
SNX20-203ENST00000423026 KIAA1644Q3SXP7 199 aa7.01□□□□□ -1.29
SNX20-203ENST00000423026 C19orf54Q5BKX5 351 aa7.01□□□□□ -1.29
SNX20-203ENST00000423026 Q5PR19 223 aa7.01□□□□□ -1.29
SNX20-203ENST00000423026 BCL6BQ8N143 479 aaPredicted RBP7.01□□□□□ -1.29
SNX20-203ENST00000423026 C18orf32Q8TCD1 76 aa7.01□□□□□ -1.29
SNX20-203ENST00000423026 SGK494Q96LW2 274 aa7.01□□□□□ -1.29
SNX20-203ENST00000423026 LINC00527Q9UJ94 153 aa7.01□□□□□ -1.29
SNX20-203ENST00000423026 IGHV3-35A0A0C4DH35 117 aa7.01□□□□□ -1.29
SNX20-203ENST00000423026 IZUMO1RA6ND01 250 aa7.01□□□□□ -1.29
SNX20-203ENST00000423026 CRXO43186 299 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms