RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 GFI1BQ5VTD9 330 aa5.58□□□□□ -1.52
VIM-202ENST00000421459 Q6ZTI0 123 aa5.58□□□□□ -1.52
VIM-202ENST00000421459 TMEM256Q8N2U0 113 aa5.58□□□□□ -1.52
VIM-202ENST00000421459 LINC00612Q8N6U2 182 aa5.58□□□□□ -1.52
VIM-202ENST00000421459 ZBTB8BQ8NAP8 495 aaPredicted RBP5.58□□□□□ -1.52
VIM-202ENST00000421459 RXFP4Q8TDU9 374 aa5.58□□□□□ -1.52
VIM-202ENST00000421459 TMEM263Q8WUH6 116 aaKnown RBP5.58□□□□□ -1.52
VIM-202ENST00000421459 CIB3Q96Q77 187 aaPredicted RBP5.58□□□□□ -1.52
VIM-202ENST00000421459 TMPRSS5Q9H3S3 457 aa5.58□□□□□ -1.52
VIM-202ENST00000421459 PSENENQ9NZ42 101 aa5.58□□□□□ -1.52
VIM-202ENST00000421459 TRAV6A0A075B6T7 132 aa5.57□□□□□ -1.52
VIM-202ENST00000421459 TRAV12-3A0A0B4J271 114 aa5.57□□□□□ -1.52
VIM-202ENST00000421459 H7BYZ3 331 aa5.57□□□□□ -1.52
VIM-202ENST00000421459 SSSCA1O60232 199 aa5.57□□□□□ -1.52
VIM-202ENST00000421459 METTL15P1P0C7V9 234 aa5.57□□□□□ -1.52
VIM-202ENST00000421459 CT45A10P0DMU9 189 aa5.57□□□□□ -1.52
VIM-202ENST00000421459 BCAP31P51572 246 aa5.57□□□□□ -1.52
VIM-202ENST00000421459 LINC00315P59091 139 aa5.57□□□□□ -1.52
VIM-202ENST00000421459 PLP1P60201 277 aa5.57□□□□□ -1.52
VIM-202ENST00000421459 ID3Q02535 119 aa5.57□□□□□ -1.52
VIM-202ENST00000421459 ARL16Q0P5N6 197 aa5.57□□□□□ -1.52
VIM-202ENST00000421459 ZNF493Q6ZR52 646 aa5.57□□□□□ -1.52
VIM-202ENST00000421459 VSIG2Q96IQ7 327 aa5.57□□□□□ -1.52
VIM-202ENST00000421459 ARV1Q9H2C2 271 aa5.57□□□□□ -1.52
VIM-202ENST00000421459 ZNF331Q9NQX6 463 aaPredicted RBP5.57□□□□□ -1.52
VIM-202ENST00000421459 FLVCR2Q9UPI3 526 aa5.57□□□□□ -1.52
VIM-202ENST00000421459 A0A096LPF7 62 aa5.56□□□□□ -1.52
VIM-202ENST00000421459 TRAV5A0A0B4J249 113 aa5.56□□□□□ -1.52
VIM-202ENST00000421459 EPM2AB3EWF7 344 aa5.56□□□□□ -1.52
VIM-202ENST00000421459 H3BQ15 152 aa5.56□□□□□ -1.52
VIM-202ENST00000421459 RLN2P04090 185 aa5.56□□□□□ -1.52
VIM-202ENST00000421459 BTF3P20290 206 aaKnown RBP5.56□□□□□ -1.52
VIM-202ENST00000421459 XGP55808 180 aa5.56□□□□□ -1.52
VIM-202ENST00000421459 UBE2MP61081 183 aaKnown RBP5.56□□□□□ -1.52
VIM-202ENST00000421459 ERCC8Q13216 396 aa5.56□□□□□ -1.52
VIM-202ENST00000421459 Q6ZRN7 208 aaPredicted RBP5.56□□□□□ -1.52
VIM-202ENST00000421459 LINC00305Q7Z4B0 112 aa5.56□□□□□ -1.52
VIM-202ENST00000421459 OR10J6PQ8NGY7 276 aa5.56□□□□□ -1.52
VIM-202ENST00000421459 ZNF431Q8TF32 576 aaPredicted RBP5.56□□□□□ -1.52
VIM-202ENST00000421459 TMEM37Q8WXS4 190 aa5.56□□□□□ -1.52
VIM-202ENST00000421459 UPK3BQ9BT76 320 aa5.56□□□□□ -1.52
VIM-202ENST00000421459 GSN-AS1Q9NRJ2 163 aa5.56□□□□□ -1.52
VIM-202ENST00000421459 MRPS16Q9Y3D3 137 aaKnown RBP5.56□□□□□ -1.52
VIM-202ENST00000421459 ALG5Q9Y673 324 aa5.56□□□□□ -1.52
VIM-202ENST00000421459 hCG_2014768A0A024R1R8 64 aa5.55□□□□□ -1.52
VIM-202ENST00000421459 C9orf170A2RU37 121 aa5.55□□□□□ -1.52
VIM-202ENST00000421459 SNURFLB1AK76 121 aa5.55□□□□□ -1.52
VIM-202ENST00000421459 SCGB1D2O95969 90 aa5.55□□□□□ -1.52
VIM-202ENST00000421459 DNAH10OSP0CZ25 163 aa5.55□□□□□ -1.52
VIM-202ENST00000421459 INAFM2P0DMQ5 153 aa5.55□□□□□ -1.52
VIM-202ENST00000421459 HAMPP81172 84 aa5.55□□□□□ -1.52
VIM-202ENST00000421459 OPCMLQ14982 345 aa5.55□□□□□ -1.52
VIM-202ENST00000421459 TTC32Q5I0X7 151 aa5.55□□□□□ -1.52
VIM-202ENST00000421459 TMEM14EPQ6UXP3 125 aa5.55□□□□□ -1.52
VIM-202ENST00000421459 Q6ZQT7 251 aa5.55□□□□□ -1.52
VIM-202ENST00000421459 CCDC28AQ8IWP9 274 aa5.55□□□□□ -1.52
VIM-202ENST00000421459 SAT2Q96F10 170 aaPredicted RBP5.55□□□□□ -1.52
VIM-202ENST00000421459 SMIM8Q96KF7 97 aa5.55□□□□□ -1.52
VIM-202ENST00000421459 NPVFQ9HCQ7 196 aa5.55□□□□□ -1.52
VIM-202ENST00000421459 A0A1W2PPQ1 181 aa5.54□□□□□ -1.52
VIM-202ENST00000421459 GOSR2O14653 212 aa5.54□□□□□ -1.52
VIM-202ENST00000421459 AGPAT2O15120 278 aa5.54□□□□□ -1.52
VIM-202ENST00000421459 IGHV3-53P01767 116 aa5.54□□□□□ -1.52
VIM-202ENST00000421459 SMR3BP02814 79 aaPredicted RBP5.54□□□□□ -1.52
VIM-202ENST00000421459 OR4E1P0C645 316 aa5.54□□□□□ -1.52
VIM-202ENST00000421459 S100A7P31151 101 aa5.54□□□□□ -1.52
VIM-202ENST00000421459 KRTAP10-1P60331 282 aa5.54□□□□□ -1.52
VIM-202ENST00000421459 SELENOTP62341 195 aa5.54□□□□□ -1.52
VIM-202ENST00000421459 TEPPQ6URK8 271 aa5.54□□□□□ -1.52
VIM-202ENST00000421459 LCN15Q6UWW0 184 aa5.54□□□□□ -1.52
VIM-202ENST00000421459 LYPD1Q8N2G4 141 aa5.54□□□□□ -1.52
VIM-202ENST00000421459 ZNF503Q96F45 646 aa5.54□□□□□ -1.52
VIM-202ENST00000421459 MGST2Q99735 147 aa5.54□□□□□ -1.52
VIM-202ENST00000421459 GPN1Q9HCN4 374 aaPredicted RBP5.54□□□□□ -1.52
VIM-202ENST00000421459 MDFICQ9P1T7 246 aa5.54□□□□□ -1.52
VIM-202ENST00000421459 KLF12Q9Y4X4 402 aa5.54□□□□□ -1.52
VIM-202ENST00000421459 TRGV2A0A075B6R0 118 aa5.53□□□□□ -1.52
VIM-202ENST00000421459 TRGV1A0A0A0MS02 117 aa5.53□□□□□ -1.52
VIM-202ENST00000421459 M0R3E3 92 aa5.53□□□□□ -1.52
VIM-202ENST00000421459 SIVA1O15304 175 aa5.53□□□□□ -1.52
VIM-202ENST00000421459 COX7A2P2O60397 106 aa5.53□□□□□ -1.52
VIM-202ENST00000421459 IGLC2P0DOY2 106 aa5.53□□□□□ -1.52
VIM-202ENST00000421459 CD300CQ08708 224 aa5.53□□□□□ -1.52
VIM-202ENST00000421459 BTN1A1Q13410 526 aa5.53□□□□□ -1.52
VIM-202ENST00000421459 C4orf46Q504U0 113 aa5.53□□□□□ -1.52
VIM-202ENST00000421459 MIC13Q5XKP0 118 aa5.53□□□□□ -1.52
VIM-202ENST00000421459 BPIFA4PQ86YQ2 179 aa5.53□□□□□ -1.52
VIM-202ENST00000421459 C11orf72Q8NBR9 251 aa5.53□□□□□ -1.52
VIM-202ENST00000421459 OR10P1Q8NGE3 313 aa5.53□□□□□ -1.52
VIM-202ENST00000421459 MITD1Q8WV92 249 aa5.53□□□□□ -1.52
VIM-202ENST00000421459 C20orf144Q9BQM9 153 aa5.53□□□□□ -1.52
VIM-202ENST00000421459 SEC22CQ9BRL7 303 aa5.53□□□□□ -1.52
VIM-202ENST00000421459 SLC50A1Q9BRV3 221 aa5.53□□□□□ -1.52
VIM-202ENST00000421459 GSKIPQ9P0R6 139 aa5.53□□□□□ -1.52
VIM-202ENST00000421459 TP53TG3Q9ULZ0 132 aa5.53□□□□□ -1.52
VIM-202ENST00000421459 RCL1Q9Y2P8 373 aaKnown RBP5.53□□□□□ -1.52
VIM-202ENST00000421459 HMCN2Q8NDA2 5059 aa5.53□□□□□ -1.52
VIM-202ENST00000421459 PIGBOS1A0A0B4J2F0 54 aa5.52□□□□□ -1.53
VIM-202ENST00000421459 NPIPB6E9PJ23 425 aa5.52□□□□□ -1.53
VIM-202ENST00000421459 H3BNG1 76 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms