RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 NBDYA0A0U1RRE5 68 aa13.2□□□□□ -0.3
VARS2-202ENST00000421263 FAM24AA6NFZ4 105 aa13.2□□□□□ -0.3
VARS2-202ENST00000421263 H3BTX0 84 aa13.2□□□□□ -0.3
VARS2-202ENST00000421263 NUDT3O95989 172 aa13.2□□□□□ -0.3
VARS2-202ENST00000421263 RAB31Q13636 194 aa13.2□□□□□ -0.3
VARS2-202ENST00000421263 GUK1Q16774 197 aa13.2□□□□□ -0.3
VARS2-202ENST00000421263 OR10J6PQ8NGY7 276 aa13.2□□□□□ -0.3
VARS2-202ENST00000421263 CHAC2Q8WUX2 184 aa13.2□□□□□ -0.3
VARS2-202ENST00000421263 RNF141Q8WVD5 230 aa13.2□□□□□ -0.3
VARS2-202ENST00000421263 C2orf50Q96LR7 162 aa13.2□□□□□ -0.3
VARS2-202ENST00000421263 PARD6GQ9BYG4 376 aaPredicted RBP13.2□□□□□ -0.3
VARS2-202ENST00000421263 LINC00588Q9Y4M8 146 aa13.2□□□□□ -0.3
VARS2-202ENST00000421263 TRAV6A0A075B6T7 132 aa13.19□□□□□ -0.3
VARS2-202ENST00000421263 CST7O76096 145 aa13.19□□□□□ -0.3
VARS2-202ENST00000421263 RPL29P47914 159 aaKnown RBP13.19□□□□□ -0.3
VARS2-202ENST00000421263 BCAP31P51572 246 aa13.19□□□□□ -0.3
VARS2-202ENST00000421263 CAV2P51636 162 aa13.19□□□□□ -0.3
VARS2-202ENST00000421263 CCL18P55774 89 aa13.19□□□□□ -0.3
VARS2-202ENST00000421263 GFI1BQ5VTD9 330 aa13.19□□□□□ -0.3
VARS2-202ENST00000421263 MIC13Q5XKP0 118 aa13.19□□□□□ -0.3
VARS2-202ENST00000421263 ODF3Q96PU9 254 aa13.19□□□□□ -0.3
VARS2-202ENST00000421263 UQCC1Q9NVA1 299 aa13.19□□□□□ -0.3
VARS2-202ENST00000421263 FAM25EA8MYX2 175 aa13.18□□□□□ -0.3
VARS2-202ENST00000421263 ZNF253O75346 499 aa13.18□□□□□ -0.3
VARS2-202ENST00000421263 CT45A10P0DMU9 189 aa13.18□□□□□ -0.3
VARS2-202ENST00000421263 C12orf45Q8N5I9 185 aaPredicted RBP13.18□□□□□ -0.3
VARS2-202ENST00000421263 OR1L4Q8NGR5 311 aa13.18□□□□□ -0.3
VARS2-202ENST00000421263 SEC22CQ9BRL7 303 aa13.18□□□□□ -0.3
VARS2-202ENST00000421263 ZNF586Q9NXT0 402 aa13.18□□□□□ -0.3
VARS2-202ENST00000421263 LRP1BQ9NZR2 4599 aa13.18□□□□□ -0.3
VARS2-202ENST00000421263 C5orf51A6NDU8 294 aa13.17□□□□□ -0.3
VARS2-202ENST00000421263 NPIPB6E9PJ23 425 aa13.17□□□□□ -0.3
VARS2-202ENST00000421263 S100A11P31949 105 aa13.17□□□□□ -0.3
VARS2-202ENST00000421263 SULT1A1P50225 295 aa13.17□□□□□ -0.3
VARS2-202ENST00000421263 ZNF575Q86XF7 245 aa13.17□□□□□ -0.3
VARS2-202ENST00000421263 CCDC28AQ8IWP9 274 aa13.17□□□□□ -0.3
VARS2-202ENST00000421263 PFDN5Q99471 154 aa13.17□□□□□ -0.3
VARS2-202ENST00000421263 LYRM2Q9NU23 88 aaPredicted RBP13.17□□□□□ -0.3
VARS2-202ENST00000421263 SLC39A9Q9NUM3 307 aa13.17□□□□□ -0.3
VARS2-202ENST00000421263 NUDT15Q9NV35 164 aa13.17□□□□□ -0.3
VARS2-202ENST00000421263 PVALBP20472 110 aaPredicted RBP13.16□□□□□ -0.3
VARS2-202ENST00000421263 TNP2Q05952 138 aa13.16□□□□□ -0.3
VARS2-202ENST00000421263 C6orf223Q8N319 242 aa13.16□□□□□ -0.3
VARS2-202ENST00000421263 TMEM252Q8N6L7 170 aa13.16□□□□□ -0.3
VARS2-202ENST00000421263 MRPL53Q96EL3 112 aaKnown RBP13.16□□□□□ -0.3
VARS2-202ENST00000421263 ZNF503Q96F45 646 aa13.16□□□□□ -0.3
VARS2-202ENST00000421263 HSPG2P98160 4391 aa13.16□□□□□ -0.3
VARS2-202ENST00000421263 IGSF23A1L1A6 192 aa13.15□□□□□ -0.3
VARS2-202ENST00000421263 NDUFA13Q9P0J0 144 aa13.15□□□□□ -0.3
VARS2-202ENST00000421263 TRBV19A0A075B6N1 114 aa13.14□□□□□ -0.31
VARS2-202ENST00000421263 TRAV12-3A0A0B4J271 114 aa13.14□□□□□ -0.31
VARS2-202ENST00000421263 H2AFB2P0C5Z0 115 aa13.14□□□□□ -0.31
VARS2-202ENST00000421263 HOXA5P20719 270 aa13.14□□□□□ -0.31
VARS2-202ENST00000421263 LEPP41159 167 aa13.14□□□□□ -0.31
VARS2-202ENST00000421263 RAB32Q13637 225 aa13.14□□□□□ -0.31
VARS2-202ENST00000421263 ATP6V1FQ16864 119 aa13.14□□□□□ -0.31
VARS2-202ENST00000421263 SSX7Q7RTT5 188 aa13.14□□□□□ -0.31
VARS2-202ENST00000421263 RXFP4Q8TDU9 374 aa13.14□□□□□ -0.31
VARS2-202ENST00000421263 PYGO2Q9BRQ0 406 aa13.14□□□□□ -0.31
VARS2-202ENST00000421263 TMEM14CQ9P0S9 112 aa13.14□□□□□ -0.31
VARS2-202ENST00000421263 TRAV26-1A0A087WT03 109 aa13.13□□□□□ -0.31
VARS2-202ENST00000421263 GAGE12BA1L429 117 aa13.13□□□□□ -0.31
VARS2-202ENST00000421263 H3BNG1 76 aa13.13□□□□□ -0.31
VARS2-202ENST00000421263 GAGE7O76087 117 aa13.13□□□□□ -0.31
VARS2-202ENST00000421263 NDUFB4O95168 129 aa13.13□□□□□ -0.31
VARS2-202ENST00000421263 RLN2P04090 185 aa13.13□□□□□ -0.31
VARS2-202ENST00000421263 GAGE12FP0CL80 117 aa13.13□□□□□ -0.31
VARS2-202ENST00000421263 GAGE12GP0CL81 117 aa13.13□□□□□ -0.31
VARS2-202ENST00000421263 GAGE12IP0CL82 117 aa13.13□□□□□ -0.31
VARS2-202ENST00000421263 M6PRP20645 277 aa13.13□□□□□ -0.31
VARS2-202ENST00000421263 DAZ2Q13117 558 aaKnown RBP13.13□□□□□ -0.31
VARS2-202ENST00000421263 OR5I1Q13606 314 aa13.13□□□□□ -0.31
VARS2-202ENST00000421263 CLINT1Q14677 625 aa13.13□□□□□ -0.31
VARS2-202ENST00000421263 GNPNAT1Q96EK6 184 aaPredicted RBP13.13□□□□□ -0.31
VARS2-202ENST00000421263 FAM19A4Q96LR4 140 aa13.13□□□□□ -0.31
VARS2-202ENST00000421263 CCDC32Q9BV29 185 aa13.13□□□□□ -0.31
VARS2-202ENST00000421263 Q9H8V8 135 aa13.13□□□□□ -0.31
VARS2-202ENST00000421263 UBE2L5PA0A1B0GUS4 154 aa13.12□□□□□ -0.31
VARS2-202ENST00000421263 SNURFLB1AK76 121 aa13.12□□□□□ -0.31
VARS2-202ENST00000421263 J3KRW8 73 aa13.12□□□□□ -0.31
VARS2-202ENST00000421263 M0R3E3 92 aa13.12□□□□□ -0.31
VARS2-202ENST00000421263 HIST1H1EP10412 219 aaKnown RBP13.12□□□□□ -0.31
VARS2-202ENST00000421263 HBG1P69891 147 aa13.12□□□□□ -0.31
VARS2-202ENST00000421263 HBG2P69892 147 aa13.12□□□□□ -0.31
VARS2-202ENST00000421263 BAXQ07812 192 aa13.12□□□□□ -0.31
VARS2-202ENST00000421263 PRELID1Q9Y255 219 aa13.12□□□□□ -0.31
VARS2-202ENST00000421263 KLLNB2CW77 178 aa13.11□□□□□ -0.31
VARS2-202ENST00000421263 MPDU1O75352 247 aa13.11□□□□□ -0.31
VARS2-202ENST00000421263 ZNF324O75467 553 aaPredicted RBP13.11□□□□□ -0.31
VARS2-202ENST00000421263 SLC25A5P05141 298 aaKnown RBP13.11□□□□□ -0.31
VARS2-202ENST00000421263 S100A10P60903 97 aa13.11□□□□□ -0.31
VARS2-202ENST00000421263 PDE6HQ13956 83 aa13.11□□□□□ -0.31
VARS2-202ENST00000421263 STX12Q86Y82 276 aa13.11□□□□□ -0.31
VARS2-202ENST00000421263 LINC00477Q96M19 166 aa13.11□□□□□ -0.31
VARS2-202ENST00000421263 C18orf15Q96N68 181 aa13.11□□□□□ -0.31
VARS2-202ENST00000421263 LINC00467Q9BRT7 94 aa13.11□□□□□ -0.31
VARS2-202ENST00000421263 FAM240BA0A1B0GVZ2 78 aa13.1□□□□□ -0.31
VARS2-202ENST00000421263 ERCC8Q13216 396 aa13.1□□□□□ -0.31
VARS2-202ENST00000421263 ESRGQ1W209 222 aa13.1□□□□□ -0.31
VARS2-202ENST00000421263 LINC00299Q6ZSB3 139 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 200.1 ms