RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 GCSHP23434 173 aa6.92□□□□□ -1.3
TNFAIP3-202ENST00000420009 RPP30P78346 268 aaKnown RBP6.92□□□□□ -1.3
TNFAIP3-202ENST00000420009 SPANXN5Q5MJ07 72 aa6.92□□□□□ -1.3
TNFAIP3-202ENST00000420009 LCN15Q6UWW0 184 aa6.92□□□□□ -1.3
TNFAIP3-202ENST00000420009 LRTM2Q8N967 370 aa6.92□□□□□ -1.3
TNFAIP3-202ENST00000420009 C11orf72Q8NBR9 251 aa6.92□□□□□ -1.3
TNFAIP3-202ENST00000420009 LRRC20Q8TCA0 184 aa6.92□□□□□ -1.3
TNFAIP3-202ENST00000420009 PYGO2Q9BRQ0 406 aa6.92□□□□□ -1.3
TNFAIP3-202ENST00000420009 TMEM70Q9BUB7 260 aa6.92□□□□□ -1.3
TNFAIP3-202ENST00000420009 NAA50Q9GZZ1 169 aaKnown RBP6.92□□□□□ -1.3
TNFAIP3-202ENST00000420009 TRGV2A0A075B6R0 118 aa6.91□□□□□ -1.3
TNFAIP3-202ENST00000420009 LINC00854A0A1B0GVQ3 168 aa6.91□□□□□ -1.3
TNFAIP3-202ENST00000420009 K7EPK0 472 aa6.91□□□□□ -1.3
TNFAIP3-202ENST00000420009 OR5G3P0C626 314 aa6.91□□□□□ -1.3
TNFAIP3-202ENST00000420009 SELENOTP62341 195 aa6.91□□□□□ -1.3
TNFAIP3-202ENST00000420009 PATE2Q6UY27 113 aa6.91□□□□□ -1.3
TNFAIP3-202ENST00000420009 CCDC190Q86UF4 302 aa6.91□□□□□ -1.3
TNFAIP3-202ENST00000420009 ZBTB8BQ8NAP8 495 aaPredicted RBP6.91□□□□□ -1.3
TNFAIP3-202ENST00000420009 ODF3Q96PU9 254 aa6.91□□□□□ -1.3
TNFAIP3-202ENST00000420009 LINC00467Q9BRT7 94 aa6.91□□□□□ -1.3
TNFAIP3-202ENST00000420009 SLC50A1Q9BRV3 221 aa6.91□□□□□ -1.3
TNFAIP3-202ENST00000420009 MRPL18Q9H0U6 180 aaKnown RBP6.91□□□□□ -1.3
TNFAIP3-202ENST00000420009 ICOSQ9Y6W8 199 aa6.91□□□□□ -1.3
TNFAIP3-202ENST00000420009 LRP1Q07954 4544 aaKnown RBP6.9□□□□□ -1.3
TNFAIP3-202ENST00000420009 TRAV12-3A0A0B4J271 114 aa6.9□□□□□ -1.3
TNFAIP3-202ENST00000420009 SLC17A3O00476 420 aa6.9□□□□□ -1.3
TNFAIP3-202ENST00000420009 CTDSP2O14595 271 aa6.9□□□□□ -1.3
TNFAIP3-202ENST00000420009 RGS5O15539 181 aa6.9□□□□□ -1.3
TNFAIP3-202ENST00000420009 CNPY1Q3B7I2 92 aa6.9□□□□□ -1.3
TNFAIP3-202ENST00000420009 C4orf46Q504U0 113 aa6.9□□□□□ -1.3
TNFAIP3-202ENST00000420009 LCE4AQ5TA78 99 aa6.9□□□□□ -1.3
TNFAIP3-202ENST00000420009 S100A7AQ86SG5 101 aa6.9□□□□□ -1.3
TNFAIP3-202ENST00000420009 ZNF680Q8NEM1 530 aa6.9□□□□□ -1.3
TNFAIP3-202ENST00000420009 ARV1Q9H2C2 271 aa6.9□□□□□ -1.3
TNFAIP3-202ENST00000420009 GSN-AS1Q9NRJ2 163 aa6.9□□□□□ -1.3
TNFAIP3-202ENST00000420009 MCUBQ9NWR8 336 aa6.9□□□□□ -1.3
TNFAIP3-202ENST00000420009 RABL2BQ9UNT1 228 aa6.9□□□□□ -1.3
TNFAIP3-202ENST00000420009 RNF24Q9Y225 148 aa6.9□□□□□ -1.3
TNFAIP3-202ENST00000420009 FUT9Q9Y231 359 aa6.9□□□□□ -1.3
TNFAIP3-202ENST00000420009 STRAPQ9Y3F4 350 aaKnown RBP6.9□□□□□ -1.3
TNFAIP3-202ENST00000420009 TRGV1A0A0A0MS02 117 aa6.89□□□□□ -1.31
TNFAIP3-202ENST00000420009 SMCO3A2RU48 225 aa6.89□□□□□ -1.31
TNFAIP3-202ENST00000420009 KRTAP29-1A8MX34 341 aaPredicted RBP6.89□□□□□ -1.31
TNFAIP3-202ENST00000420009 NPIPB6E9PJ23 425 aa6.89□□□□□ -1.31
TNFAIP3-202ENST00000420009 H3BMQ9 156 aa6.89□□□□□ -1.31
TNFAIP3-202ENST00000420009 J3KRW8 73 aa6.89□□□□□ -1.31
TNFAIP3-202ENST00000420009 K7EP13 123 aa6.89□□□□□ -1.31
TNFAIP3-202ENST00000420009 ZNF324O75467 553 aaPredicted RBP6.89□□□□□ -1.31
TNFAIP3-202ENST00000420009 CT45A10P0DMU9 189 aa6.89□□□□□ -1.31
TNFAIP3-202ENST00000420009 LEPP41159 167 aa6.89□□□□□ -1.31
TNFAIP3-202ENST00000420009 IL18Q14116 193 aa6.89□□□□□ -1.31
TNFAIP3-202ENST00000420009 TMEM128Q5BJH2 165 aa6.89□□□□□ -1.31
TNFAIP3-202ENST00000420009 TEPPQ6URK8 271 aa6.89□□□□□ -1.31
TNFAIP3-202ENST00000420009 LYPD5Q6UWN5 251 aa6.89□□□□□ -1.31
TNFAIP3-202ENST00000420009 ZNF431Q8TF32 576 aaPredicted RBP6.89□□□□□ -1.31
TNFAIP3-202ENST00000420009 ARL6Q9H0F7 186 aa6.89□□□□□ -1.31
TNFAIP3-202ENST00000420009 MSRB1Q9NZV6 116 aa6.89□□□□□ -1.31
TNFAIP3-202ENST00000420009 RABL2AQ9UBK7 228 aaPredicted RBP6.89□□□□□ -1.31
TNFAIP3-202ENST00000420009 RSL24D1Q9UHA3 163 aaKnown RBP6.89□□□□□ -1.31
TNFAIP3-202ENST00000420009 FAT3Q8TDW7 4589 aa6.88□□□□□ -1.31
TNFAIP3-202ENST00000420009 TRAV9-2A0A087WT02 112 aa6.88□□□□□ -1.31
TNFAIP3-202ENST00000420009 CCDC160A6NGH7 325 aa6.88□□□□□ -1.31
TNFAIP3-202ENST00000420009 FNDC10F2Z333 226 aa6.88□□□□□ -1.31
TNFAIP3-202ENST00000420009 SPINK4O60575 86 aa6.88□□□□□ -1.31
TNFAIP3-202ENST00000420009 SNRPCP09234 159 aaKnown RBP6.88□□□□□ -1.31
TNFAIP3-202ENST00000420009 IGLC2P0DOY2 106 aa6.88□□□□□ -1.31
TNFAIP3-202ENST00000420009 ANXA7P20073 488 aaKnown RBP6.88□□□□□ -1.31
TNFAIP3-202ENST00000420009 VAMP1P23763 118 aa6.88□□□□□ -1.31
TNFAIP3-202ENST00000420009 TMBIM6P55061 237 aa6.88□□□□□ -1.31
TNFAIP3-202ENST00000420009 PXDC1Q5TGL8 231 aa6.88□□□□□ -1.31
TNFAIP3-202ENST00000420009 SAT2Q96F10 170 aaPredicted RBP6.88□□□□□ -1.31
TNFAIP3-202ENST00000420009 ST6GAL2Q96JF0 529 aa6.88□□□□□ -1.31
TNFAIP3-202ENST00000420009 PRO0255Q9UI72 69 aa6.88□□□□□ -1.31
TNFAIP3-202ENST00000420009 LY96Q9Y6Y9 160 aa6.88□□□□□ -1.31
TNFAIP3-202ENST00000420009 LRCOL1A6NCL2 159 aa6.87□□□□□ -1.31
TNFAIP3-202ENST00000420009 KLLNB2CW77 178 aa6.87□□□□□ -1.31
TNFAIP3-202ENST00000420009 H3BTX0 84 aa6.87□□□□□ -1.31
TNFAIP3-202ENST00000420009 CCNKO75909 580 aa6.87□□□□□ -1.31
TNFAIP3-202ENST00000420009 CRYBA4P53673 196 aa6.87□□□□□ -1.31
TNFAIP3-202ENST00000420009 TCL1AP56279 114 aa6.87□□□□□ -1.31
TNFAIP3-202ENST00000420009 ID3Q02535 119 aa6.87□□□□□ -1.31
TNFAIP3-202ENST00000420009 SLC38A11Q08AI6 406 aa6.87□□□□□ -1.31
TNFAIP3-202ENST00000420009 SPCS2Q15005 226 aa6.87□□□□□ -1.31
TNFAIP3-202ENST00000420009 ANXA2RQ3ZCQ2 193 aa6.87□□□□□ -1.31
TNFAIP3-202ENST00000420009 MORN5Q5VZ52 161 aa6.87□□□□□ -1.31
TNFAIP3-202ENST00000420009 LINC00305Q7Z4B0 112 aa6.87□□□□□ -1.31
TNFAIP3-202ENST00000420009 BPIFA4PQ86YQ2 179 aa6.87□□□□□ -1.31
TNFAIP3-202ENST00000420009 WFDC10BQ8IUB3 73 aa6.87□□□□□ -1.31
TNFAIP3-202ENST00000420009 NTN5Q8WTR8 489 aaPredicted RBP6.87□□□□□ -1.31
TNFAIP3-202ENST00000420009 RAB2BQ8WUD1 216 aa6.87□□□□□ -1.31
TNFAIP3-202ENST00000420009 DIRAS2Q96HU8 199 aa6.87□□□□□ -1.31
TNFAIP3-202ENST00000420009 BCL7BQ9BQE9 202 aa6.87□□□□□ -1.31
TNFAIP3-202ENST00000420009 KRTAP4-11Q9BYQ6 195 aa6.87□□□□□ -1.31
TNFAIP3-202ENST00000420009 KLF12Q9Y4X4 402 aa6.87□□□□□ -1.31
TNFAIP3-202ENST00000420009 PXMP4Q9Y6I8 212 aa6.87□□□□□ -1.31
TNFAIP3-202ENST00000420009 IGLV5-52A0A0A0MRZ9 124 aa6.86□□□□□ -1.31
TNFAIP3-202ENST00000420009 C7orf71A4D174 169 aa6.86□□□□□ -1.31
TNFAIP3-202ENST00000420009 H3BQ15 152 aa6.86□□□□□ -1.31
TNFAIP3-202ENST00000420009 SFT2D2O95562 160 aa6.86□□□□□ -1.31
TNFAIP3-202ENST00000420009 IGHV3-53P01767 116 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms