RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 VGLL1Q99990 258 aa9.32□□□□□ -0.92
LIMK1-202ENST00000418310 J3KRW8 73 aa9.32□□□□□ -0.92
LIMK1-202ENST00000418310 ORM1P02763 201 aa9.32□□□□□ -0.92
LIMK1-202ENST00000418310 ERCC8Q13216 396 aa9.32□□□□□ -0.92
LIMK1-202ENST00000418310 RNF182Q8N6D2 247 aa9.32□□□□□ -0.92
LIMK1-202ENST00000418310 NEU4Q8WWR8 484 aaPredicted RBP9.32□□□□□ -0.92
LIMK1-202ENST00000418310 CHCHD1Q96BP2 118 aaKnown RBP9.32□□□□□ -0.92
LIMK1-202ENST00000418310 TIMD4Q96H15 378 aa9.32□□□□□ -0.92
LIMK1-202ENST00000418310 NAA38Q9BRA0 125 aaKnown RBP9.32□□□□□ -0.92
LIMK1-202ENST00000418310 MSRB1Q9NZV6 116 aa9.32□□□□□ -0.92
LIMK1-202ENST00000418310 LINC00527Q9UJ94 153 aa9.32□□□□□ -0.92
LIMK1-202ENST00000418310 NPIPB6E9PJ23 425 aa9.32□□□□□ -0.92
LIMK1-202ENST00000418310 LY6LH3BQJ8 138 aa9.32□□□□□ -0.92
LIMK1-202ENST00000418310 HAX1O00165 279 aa9.32□□□□□ -0.92
LIMK1-202ENST00000418310 MFAP4P55083 255 aa9.32□□□□□ -0.92
LIMK1-202ENST00000418310 TWIST1Q15672 202 aa9.32□□□□□ -0.92
LIMK1-202ENST00000418310 ZNF738Q8NE65 137 aa9.32□□□□□ -0.92
LIMK1-202ENST00000418310 TMEM14CQ9P0S9 112 aa9.32□□□□□ -0.92
LIMK1-202ENST00000418310 GAGE1Q13065 139 aa9.31□□□□□ -0.92
LIMK1-202ENST00000418310 RNF151Q2KHN1 245 aa9.31□□□□□ -0.92
LIMK1-202ENST00000418310 VMO1Q7Z5L0 202 aa9.31□□□□□ -0.92
LIMK1-202ENST00000418310 MRPL52Q86TS9 123 aaKnown RBP9.31□□□□□ -0.92
LIMK1-202ENST00000418310 CFHR4Q92496 578 aa9.31□□□□□ -0.92
LIMK1-202ENST00000418310 SMIM12Q96EX1 92 aa9.31□□□□□ -0.92
LIMK1-202ENST00000418310 GFRA4Q9GZZ7 299 aa9.31□□□□□ -0.92
LIMK1-202ENST00000418310 RAB1BQ9H0U4 201 aa9.31□□□□□ -0.92
LIMK1-202ENST00000418310 COX11Q9Y6N1 276 aa9.31□□□□□ -0.92
LIMK1-202ENST00000418310 NHLH1Q02575 133 aa9.31□□□□□ -0.92
LIMK1-202ENST00000418310 PVRIGQ6DKI7 326 aa9.31□□□□□ -0.92
LIMK1-202ENST00000418310 ARL6IP6Q8N6S5 226 aa9.31□□□□□ -0.92
LIMK1-202ENST00000418310 MRPS16Q9Y3D3 137 aaKnown RBP9.31□□□□□ -0.92
LIMK1-202ENST00000418310 SOX21Q9Y651 276 aaPredicted RBP9.31□□□□□ -0.92
LIMK1-202ENST00000418310 ZNF80P51504 273 aaPredicted RBP9.3□□□□□ -0.92
LIMK1-202ENST00000418310 NDFIP1Q9BT67 221 aa9.3□□□□□ -0.92
LIMK1-202ENST00000418310 GAS8-AS1O95177 125 aa9.3□□□□□ -0.92
LIMK1-202ENST00000418310 CEACAM3P40198 252 aa9.3□□□□□ -0.92
LIMK1-202ENST00000418310 OR4C5Q8NGB2 326 aa9.3□□□□□ -0.92
LIMK1-202ENST00000418310 RNASE8Q8TDE3 154 aaKnown RBP9.3□□□□□ -0.92
LIMK1-202ENST00000418310 PRELID3AQ96N28 172 aa9.3□□□□□ -0.92
LIMK1-202ENST00000418310 RAXQ9Y2V3 346 aa9.3□□□□□ -0.92
LIMK1-202ENST00000418310 K7ENP7 123 aa9.3□□□□□ -0.92
LIMK1-202ENST00000418310 EVI2AP22794 236 aa9.3□□□□□ -0.92
LIMK1-202ENST00000418310 FAM162BQ5T6X4 162 aa9.3□□□□□ -0.92
LIMK1-202ENST00000418310 HSPB8Q9UJY1 196 aa9.3□□□□□ -0.92
LIMK1-202ENST00000418310 EGR2P11161 476 aaPredicted RBP9.29□□□□□ -0.92
LIMK1-202ENST00000418310 ZFP36P26651 326 aaKnown RBP9.29□□□□□ -0.92
LIMK1-202ENST00000418310 CACNG7P62955 275 aa9.29□□□□□ -0.92
LIMK1-202ENST00000418310 F8W735 103 aaPredicted RBP9.29□□□□□ -0.92
LIMK1-202ENST00000418310 TM4SF20Q53R12 229 aa9.29□□□□□ -0.92
LIMK1-202ENST00000418310 SIGLEC8Q9NYZ4 499 aa9.29□□□□□ -0.92
LIMK1-202ENST00000418310 CSPG4Q6UVK1 2322 aa9.29□□□□□ -0.92
LIMK1-202ENST00000418310 PRAC2D3DTV9 90 aa9.29□□□□□ -0.92
LIMK1-202ENST00000418310 OVOL3O00110 214 aa9.29□□□□□ -0.92
LIMK1-202ENST00000418310 MRPS12O15235 138 aaKnown RBP9.29□□□□□ -0.92
LIMK1-202ENST00000418310 CKS2P33552 79 aa9.29□□□□□ -0.92
LIMK1-202ENST00000418310 OR10AG1Q8NH19 301 aa9.29□□□□□ -0.92
LIMK1-202ENST00000418310 IGLV11-55A0A075B6I3 123 aa9.28□□□□□ -0.92
LIMK1-202ENST00000418310 G3V318 75 aa9.28□□□□□ -0.92
LIMK1-202ENST00000418310 SPRY2O43597 315 aa9.28□□□□□ -0.92
LIMK1-202ENST00000418310 LINC01548A6NM66 108 aa9.28□□□□□ -0.92
LIMK1-202ENST00000418310 ANKRD39Q53RE8 183 aa9.28□□□□□ -0.92
LIMK1-202ENST00000418310 PRSS57Q6UWY2 283 aa9.28□□□□□ -0.92
LIMK1-202ENST00000418310 ZNF747Q9BV97 191 aa9.28□□□□□ -0.92
LIMK1-202ENST00000418310 ST20Q9HBF5 79 aa9.28□□□□□ -0.92
LIMK1-202ENST00000418310 NPYP01303 97 aa9.27□□□□□ -0.92
LIMK1-202ENST00000418310 GATA1P15976 413 aaPredicted RBP9.27□□□□□ -0.92
LIMK1-202ENST00000418310 MRPL51Q4U2R6 128 aaKnown RBP9.27□□□□□ -0.92
LIMK1-202ENST00000418310 VPS13CQ709C8 3753 aa9.27□□□□□ -0.93
LIMK1-202ENST00000418310 WI2-2373I1.2A0A1W2PRP0 233 aa9.27□□□□□ -0.93
LIMK1-202ENST00000418310 ADORA2A-AS1P86434 159 aa9.27□□□□□ -0.93
LIMK1-202ENST00000418310 C15orf32Q32M92 178 aa9.27□□□□□ -0.93
LIMK1-202ENST00000418310 Q6ZQT7 251 aa9.27□□□□□ -0.93
LIMK1-202ENST00000418310 UBTD1Q9HAC8 227 aa9.27□□□□□ -0.93
LIMK1-202ENST00000418310 RABAC1Q9UI14 185 aa9.27□□□□□ -0.93
LIMK1-202ENST00000418310 CREBBPQ92793 2442 aa9.27□□□□□ -0.93
LIMK1-202ENST00000418310 IGKV3-7A0A075B6H7 116 aa9.27□□□□□ -0.93
LIMK1-202ENST00000418310 A0A1W2PPR1 153 aa9.27□□□□□ -0.93
LIMK1-202ENST00000418310 CLEC3BP05452 202 aa9.27□□□□□ -0.93
LIMK1-202ENST00000418310 CTSGP08311 255 aa9.27□□□□□ -0.93
LIMK1-202ENST00000418310 HOXB4P17483 251 aaPredicted RBP9.27□□□□□ -0.93
LIMK1-202ENST00000418310 NMUP48645 174 aa9.27□□□□□ -0.93
LIMK1-202ENST00000418310 BVES-AS1Q5T3Y7 98 aa9.27□□□□□ -0.93
LIMK1-202ENST00000418310 CLEC19AQ6UXS0 136 aa9.27□□□□□ -0.93
LIMK1-202ENST00000418310 TMEM219Q86XT9 240 aa9.27□□□□□ -0.93
LIMK1-202ENST00000418310 PRR25Q96S07 402 aa9.27□□□□□ -0.93
LIMK1-202ENST00000418310 FAM231BA6NCW3 169 aa9.26□□□□□ -0.93
LIMK1-202ENST00000418310 PRTN3P24158 256 aa9.26□□□□□ -0.93
LIMK1-202ENST00000418310 UBE2V1Q13404 147 aa9.26□□□□□ -0.93
LIMK1-202ENST00000418310 PET117Q6UWS5 81 aa9.26□□□□□ -0.93
LIMK1-202ENST00000418310 ZNF562Q6V9R5 426 aa9.26□□□□□ -0.93
LIMK1-202ENST00000418310 ORAOV1Q8WV07 137 aa9.26□□□□□ -0.93
LIMK1-202ENST00000418310 SCRT2Q9NQ03 307 aa9.26□□□□□ -0.93
LIMK1-202ENST00000418310 SMAD5-AS1Q9Y6J3 95 aa9.26□□□□□ -0.93
LIMK1-202ENST00000418310 DOPEY2Q9Y3R5 2298 aa9.26□□□□□ -0.93
LIMK1-202ENST00000418310 RHOGP84095 191 aa9.26□□□□□ -0.93
LIMK1-202ENST00000418310 AMMECR1LQ6DCA0 310 aa9.26□□□□□ -0.93
LIMK1-202ENST00000418310 ORMDL3Q8N138 153 aa9.26□□□□□ -0.93
LIMK1-202ENST00000418310 FER1L6-AS1Q8NA97 138 aa9.26□□□□□ -0.93
LIMK1-202ENST00000418310 LY6G5BQ8NDX9 201 aa9.26□□□□□ -0.93
LIMK1-202ENST00000418310 OR11H6Q8NGC7 330 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms