RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 Q6ZT83 130 aa6.33□□□□□ -1.4
HMGXB4-202ENST00000418170 MOGAT3Q86VF5 341 aa6.33□□□□□ -1.4
HMGXB4-202ENST00000418170 OR4C13Q8NGP0 309 aa6.33□□□□□ -1.4
HMGXB4-202ENST00000418170 VPS13CQ709C8 3753 aa6.33□□□□□ -1.4
HMGXB4-202ENST00000418170 LAMTOR5O43504 91 aa6.33□□□□□ -1.4
HMGXB4-202ENST00000418170 ATP5LO75964 103 aa6.33□□□□□ -1.4
HMGXB4-202ENST00000418170 IGFBP4P22692 258 aa6.33□□□□□ -1.4
HMGXB4-202ENST00000418170 LEPP41159 167 aa6.33□□□□□ -1.4
HMGXB4-202ENST00000418170 TWIST1Q15672 202 aa6.33□□□□□ -1.4
HMGXB4-202ENST00000418170 HIST1H4GQ99525 98 aa6.33□□□□□ -1.4
HMGXB4-202ENST00000418170 MAP1LC3AQ9H492 121 aa6.33□□□□□ -1.4
HMGXB4-202ENST00000418170 TMEM8BA6NDV4 472 aa6.33□□□□□ -1.4
HMGXB4-202ENST00000418170 TMEM158Q8WZ71 300 aa6.33□□□□□ -1.4
HMGXB4-202ENST00000418170 FOXC2Q99958 501 aa6.33□□□□□ -1.4
HMGXB4-202ENST00000418170 TRBV7-3A0A075B6L6 115 aa6.32□□□□□ -1.4
HMGXB4-202ENST00000418170 TRBV19A0A075B6N1 114 aa6.32□□□□□ -1.4
HMGXB4-202ENST00000418170 TM4SF5O14894 197 aa6.32□□□□□ -1.4
HMGXB4-202ENST00000418170 MEOX1P50221 254 aa6.32□□□□□ -1.4
HMGXB4-202ENST00000418170 FAM201AQ5SY85 155 aa6.32□□□□□ -1.4
HMGXB4-202ENST00000418170 MORN3Q6PF18 240 aaPredicted RBP6.32□□□□□ -1.4
HMGXB4-202ENST00000418170 TNFRSF13BO14836 293 aaPredicted RBP6.32□□□□□ -1.4
HMGXB4-202ENST00000418170 IGLV2-23P01705 113 aa6.32□□□□□ -1.4
HMGXB4-202ENST00000418170 GAGE5Q13069 117 aa6.32□□□□□ -1.4
HMGXB4-202ENST00000418170 GAGE6Q13070 117 aa6.32□□□□□ -1.4
HMGXB4-202ENST00000418170 HCP5Q6MZN7 132 aa6.32□□□□□ -1.4
HMGXB4-202ENST00000418170 SPRR3Q9UBC9 169 aa6.32□□□□□ -1.4
HMGXB4-202ENST00000418170 MGAQ8IWI9 3026 aa6.32□□□□□ -1.4
HMGXB4-202ENST00000418170 TMSB15BA0A087X1C1 80 aa6.32□□□□□ -1.4
HMGXB4-202ENST00000418170 LINC01619G3V211 115 aa6.32□□□□□ -1.4
HMGXB4-202ENST00000418170 LYZP61626 148 aa6.32□□□□□ -1.4
HMGXB4-202ENST00000418170 SIGLEC15Q6ZMC9 328 aa6.32□□□□□ -1.4
HMGXB4-202ENST00000418170 C8orf49Q96NF6 230 aa6.32□□□□□ -1.4
HMGXB4-202ENST00000418170 ANAPC13Q9BS18 74 aa6.32□□□□□ -1.4
HMGXB4-202ENST00000418170 NXT2Q9NPJ8 142 aaKnown RBP6.32□□□□□ -1.4
HMGXB4-202ENST00000418170 LYPD1Q8N2G4 141 aa6.31□□□□□ -1.4
HMGXB4-202ENST00000418170 DLX4Q92988 240 aaPredicted RBP6.31□□□□□ -1.4
HMGXB4-202ENST00000418170 DEFB127Q9H1M4 99 aa6.31□□□□□ -1.4
HMGXB4-202ENST00000418170 IGLV1-44P01699 117 aa6.31□□□□□ -1.4
HMGXB4-202ENST00000418170 FAM169BQ8N8A8 192 aa6.31□□□□□ -1.4
HMGXB4-202ENST00000418170 GLMPQ8WWB7 406 aa6.31□□□□□ -1.4
HMGXB4-202ENST00000418170 NGBQ9NPG2 151 aa6.31□□□□□ -1.4
HMGXB4-202ENST00000418170 TRAV40A0A0B4J280 105 aa6.31□□□□□ -1.4
HMGXB4-202ENST00000418170 MSMPQ1L6U9 139 aa6.31□□□□□ -1.4
HMGXB4-202ENST00000418170 TMEM95Q3KNT9 176 aa6.31□□□□□ -1.4
HMGXB4-202ENST00000418170 C17orf77Q96MU5 243 aa6.31□□□□□ -1.4
HMGXB4-202ENST00000418170 GAFA1Q96PS6 74 aa6.31□□□□□ -1.4
HMGXB4-202ENST00000418170 TMEM160Q9NX00 188 aa6.31□□□□□ -1.4
HMGXB4-202ENST00000418170 K7EM74 188 aa6.3□□□□□ -1.4
HMGXB4-202ENST00000418170 SH2D1AO60880 128 aa6.3□□□□□ -1.4
HMGXB4-202ENST00000418170 MRGPRG-AS1Q2M3A8 158 aa6.3□□□□□ -1.4
HMGXB4-202ENST00000418170 C6orf15Q6UXA7 325 aaPredicted RBP6.3□□□□□ -1.4
HMGXB4-202ENST00000418170 C1orf162Q8NEQ5 155 aaPredicted RBP6.3□□□□□ -1.4
HMGXB4-202ENST00000418170 VCX2Q9H322 139 aa6.3□□□□□ -1.4
HMGXB4-202ENST00000418170 TPSG1Q9NRR2 321 aa6.3□□□□□ -1.4
HMGXB4-202ENST00000418170 INTS1Q8N201 2190 aaKnown RBP6.3□□□□□ -1.4
HMGXB4-202ENST00000418170 TRGV5A0A0B4J1U4 118 aa6.3□□□□□ -1.4
HMGXB4-202ENST00000418170 IGHV3-21A0A0B4J1V1 117 aa6.3□□□□□ -1.4
HMGXB4-202ENST00000418170 PPDPFLQ8WWR9 84 aa6.3□□□□□ -1.4
HMGXB4-202ENST00000418170 RNF185Q96GF1 192 aa6.3□□□□□ -1.4
HMGXB4-202ENST00000418170 SCNM1Q9BWG6 230 aa6.3□□□□□ -1.4
HMGXB4-202ENST00000418170 TMEM133Q9H2Q1 129 aa6.3□□□□□ -1.4
HMGXB4-202ENST00000418170 MRPL35Q9NZE8 188 aaKnown RBP6.3□□□□□ -1.4
HMGXB4-202ENST00000418170 IGHV1-18A0A0C4DH31 117 aa6.3□□□□□ -1.4
HMGXB4-202ENST00000418170 HOXA3O43365 443 aaPredicted RBP6.3□□□□□ -1.4
HMGXB4-202ENST00000418170 RBP4P02753 201 aa6.3□□□□□ -1.4
HMGXB4-202ENST00000418170 RALYQ9UKM9 306 aaKnown RBP6.3□□□□□ -1.4
HMGXB4-202ENST00000418170 MED13Q9UHV7 2174 aa6.3□□□□□ -1.4
HMGXB4-202ENST00000418170 PRSS29PA6NIE9 313 aa6.3□□□□□ -1.4
HMGXB4-202ENST00000418170 NCBP2LA6PVI3 153 aaKnown RBP6.3□□□□□ -1.4
HMGXB4-202ENST00000418170 PRB4P10163 310 aaPredicted RBP6.3□□□□□ -1.4
HMGXB4-202ENST00000418170 FAM216BQ8N7L0 139 aa6.3□□□□□ -1.4
HMGXB4-202ENST00000418170 DKK4Q9UBT3 224 aa6.3□□□□□ -1.4
HMGXB4-202ENST00000418170 TNFRSF6BO95407 300 aa6.29□□□□□ -1.4
HMGXB4-202ENST00000418170 IL4P05112 153 aa6.29□□□□□ -1.4
HMGXB4-202ENST00000418170 VMA21Q3ZAQ7 101 aa6.29□□□□□ -1.4
HMGXB4-202ENST00000418170 CARD19Q96LW7 228 aa6.29□□□□□ -1.4
HMGXB4-202ENST00000418170 CCL13Q99616 98 aa6.29□□□□□ -1.4
HMGXB4-202ENST00000418170 M0R3E3 92 aa6.29□□□□□ -1.4
HMGXB4-202ENST00000418170 GAS8-AS1O95177 125 aa6.29□□□□□ -1.4
HMGXB4-202ENST00000418170 IGLC6P0CF74 106 aa6.29□□□□□ -1.4
HMGXB4-202ENST00000418170 COX8CQ7Z4L0 72 aa6.29□□□□□ -1.4
HMGXB4-202ENST00000418170 TEN1Q86WV5 123 aa6.29□□□□□ -1.4
HMGXB4-202ENST00000418170 SHANK2-AS3Q9BTD1 123 aa6.29□□□□□ -1.4
HMGXB4-202ENST00000418170 ZFAND6Q6FIF0 208 aa6.29□□□□□ -1.4
HMGXB4-202ENST00000418170 MDS2Q8NDY4 140 aa6.29□□□□□ -1.4
HMGXB4-202ENST00000418170 RPEQ96AT9 228 aa6.29□□□□□ -1.4
HMGXB4-202ENST00000418170 ABCA1O95477 2261 aa6.28□□□□□ -1.4
HMGXB4-202ENST00000418170 DCHS2Q6V1P9 2916 aa6.28□□□□□ -1.4
HMGXB4-202ENST00000418170 B5MCH6 92 aa6.28□□□□□ -1.4
HMGXB4-202ENST00000418170 SPRY3O43610 288 aa6.28□□□□□ -1.4
HMGXB4-202ENST00000418170 DIAPH2-AS1Q14236 149 aa6.28□□□□□ -1.4
HMGXB4-202ENST00000418170 SHISA2Q6UWI4 295 aa6.28□□□□□ -1.4
HMGXB4-202ENST00000418170 DEFB108BQ8NET1 73 aa6.28□□□□□ -1.4
HMGXB4-202ENST00000418170 MAFAQ8NHW3 353 aaPredicted RBP6.28□□□□□ -1.4
HMGXB4-202ENST00000418170 RNF7Q9UBF6 113 aa6.28□□□□□ -1.4
HMGXB4-202ENST00000418170 UFC1Q9Y3C8 167 aa6.28□□□□□ -1.4
HMGXB4-202ENST00000418170 H3BRN7 92 aa6.28□□□□□ -1.4
HMGXB4-202ENST00000418170 EGR2P11161 476 aaPredicted RBP6.28□□□□□ -1.4
HMGXB4-202ENST00000418170 PLNP26678 52 aa6.28□□□□□ -1.4
HMGXB4-202ENST00000418170 GATA4P43694 442 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms