RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 UBE2CO00762 179 aa12.86□□□□□ -0.35
SSBP3-205ENST00000417664 P01737 135 aa12.86□□□□□ -0.35
SSBP3-205ENST00000417664 TRGC1P0CF51 173 aa12.86□□□□□ -0.35
SSBP3-205ENST00000417664 SAPCD1Q5SSQ6 148 aa12.86□□□□□ -0.35
SSBP3-205ENST00000417664 LCNL1Q6ZST4 164 aa12.86□□□□□ -0.35
SSBP3-205ENST00000417664 COX8CQ7Z4L0 72 aa12.86□□□□□ -0.35
SSBP3-205ENST00000417664 TSKUQ8WUA8 353 aa12.86□□□□□ -0.35
SSBP3-205ENST00000417664 DAZ1Q9NQZ3 744 aaKnown RBP12.86□□□□□ -0.35
SSBP3-205ENST00000417664 UNC79Q9P2D8 2635 aa12.86□□□□□ -0.35
SSBP3-205ENST00000417664 FAM231BA6NCW3 169 aa12.86□□□□□ -0.35
SSBP3-205ENST00000417664 A8MWL6 223 aa12.86□□□□□ -0.35
SSBP3-205ENST00000417664 NPIPB6E9PJ23 425 aa12.86□□□□□ -0.35
SSBP3-205ENST00000417664 CHEK1O14757 476 aa12.86□□□□□ -0.35
SSBP3-205ENST00000417664 ZNF207O43670 478 aaKnown RBP12.86□□□□□ -0.35
SSBP3-205ENST00000417664 LCN12Q6JVE5 192 aa12.86□□□□□ -0.35
SSBP3-205ENST00000417664 UBE2E2Q96LR5 201 aa12.86□□□□□ -0.35
SSBP3-205ENST00000417664 RPP21Q9H633 154 aaKnown RBP12.86□□□□□ -0.35
SSBP3-205ENST00000417664 IZUMO1RA6ND01 250 aa12.85□□□□□ -0.35
SSBP3-205ENST00000417664 BMI1P35226 326 aa12.85□□□□□ -0.35
SSBP3-205ENST00000417664 RASL11AQ6T310 242 aa12.85□□□□□ -0.35
SSBP3-205ENST00000417664 GBGT1Q8N5D6 347 aa12.85□□□□□ -0.35
SSBP3-205ENST00000417664 GFRA4Q9GZZ7 299 aa12.85□□□□□ -0.35
SSBP3-205ENST00000417664 TMEM160Q9NX00 188 aa12.85□□□□□ -0.35
SSBP3-205ENST00000417664 NAT8BQ9UHF3 227 aa12.85□□□□□ -0.35
SSBP3-205ENST00000417664 TRAPPC1Q9Y5R8 145 aa12.85□□□□□ -0.35
SSBP3-205ENST00000417664 IGHV3-66A0A0C4DH42 116 aa12.84□□□□□ -0.35
SSBP3-205ENST00000417664 MT-ND6P03923 174 aa12.84□□□□□ -0.35
SSBP3-205ENST00000417664 LGALS1P09382 135 aaKnown RBP12.84□□□□□ -0.35
SSBP3-205ENST00000417664 WDR73Q6P4I2 378 aa12.84□□□□□ -0.35
SSBP3-205ENST00000417664 IL17RELQ6ZVW7 336 aa12.84□□□□□ -0.35
SSBP3-205ENST00000417664 GNB1LQ9BYB4 327 aa12.84□□□□□ -0.35
SSBP3-205ENST00000417664 YAE1D1Q9NRH1 226 aa12.84□□□□□ -0.35
SSBP3-205ENST00000417664 UFC1Q9Y3C8 167 aa12.84□□□□□ -0.35
SSBP3-205ENST00000417664 IGHV3OR16-13A0A075B7E8 117 aa12.83□□□□□ -0.35
SSBP3-205ENST00000417664 IGHV3-74A0A0B4J1X5 117 aa12.83□□□□□ -0.35
SSBP3-205ENST00000417664 IGHV7-4-1A0A0J9YVY3 117 aa12.83□□□□□ -0.35
SSBP3-205ENST00000417664 RPLP1P05386 114 aaKnown RBP12.83□□□□□ -0.35
SSBP3-205ENST00000417664 CT45A10P0DMU9 189 aa12.83□□□□□ -0.35
SSBP3-205ENST00000417664 FABP9Q0Z7S8 132 aa12.83□□□□□ -0.35
SSBP3-205ENST00000417664 C8orf86Q6ZUL3 223 aa12.83□□□□□ -0.35
SSBP3-205ENST00000417664 IGHV3-49A0A0A0MS15 119 aa12.83□□□□□ -0.36
SSBP3-205ENST00000417664 HOXA5P20719 270 aa12.83□□□□□ -0.36
SSBP3-205ENST00000417664 LINC00322Q6ZN03 302 aaPredicted RBP12.83□□□□□ -0.36
SSBP3-205ENST00000417664 NDUFA6P56556 154 aa12.82□□□□□ -0.36
SSBP3-205ENST00000417664 SAMD13Q5VXD3 122 aa12.82□□□□□ -0.36
SSBP3-205ENST00000417664 C10orf99Q6UWK7 81 aa12.82□□□□□ -0.36
SSBP3-205ENST00000417664 ATP5L2Q7Z4Y8 100 aa12.82□□□□□ -0.36
SSBP3-205ENST00000417664 ZC2HC1AQ96GY0 325 aa12.82□□□□□ -0.36
SSBP3-205ENST00000417664 NDFIP1Q9BT67 221 aa12.82□□□□□ -0.36
SSBP3-205ENST00000417664 SMPXQ9UHP9 88 aa12.82□□□□□ -0.36
SSBP3-205ENST00000417664 MXRA5Q9NR99 2828 aa12.81□□□□□ -0.36
SSBP3-205ENST00000417664 IGKV2-40A0A087WW87 121 aaPredicted RBP12.81□□□□□ -0.36
SSBP3-205ENST00000417664 DNAJC9-AS1A6NH13 148 aa12.81□□□□□ -0.36
SSBP3-205ENST00000417664 IGKV2D-40P01614 121 aaPredicted RBP12.81□□□□□ -0.36
SSBP3-205ENST00000417664 FLNAP21333 2647 aaKnown RBP12.81□□□□□ -0.36
SSBP3-205ENST00000417664 WIPF2Q8TF74 440 aaPredicted RBP12.81□□□□□ -0.36
SSBP3-205ENST00000417664 PRR25Q96S07 402 aa12.81□□□□□ -0.36
SSBP3-205ENST00000417664 RHPN1-AS1Q9BWJ2 59 aa12.81□□□□□ -0.36
SSBP3-205ENST00000417664 TRAV8-2A0A0B4J237 113 aa12.8□□□□□ -0.36
SSBP3-205ENST00000417664 LGALS9O00182 355 aa12.8□□□□□ -0.36
SSBP3-205ENST00000417664 CA1P00915 261 aaPredicted RBP12.8□□□□□ -0.36
SSBP3-205ENST00000417664 TCL1AP56279 114 aa12.8□□□□□ -0.36
SSBP3-205ENST00000417664 REC114Q7Z4M0 266 aa12.8□□□□□ -0.36
SSBP3-205ENST00000417664 NUP35Q8NFH5 326 aa12.8□□□□□ -0.36
SSBP3-205ENST00000417664 C16orf92Q96LL3 132 aa12.8□□□□□ -0.36
SSBP3-205ENST00000417664 DUX5Q96PT3 197 aa12.8□□□□□ -0.36
SSBP3-205ENST00000417664 NEU1Q99519 415 aa12.8□□□□□ -0.36
SSBP3-205ENST00000417664 ITPR2Q14571 2701 aa12.8□□□□□ -0.36
SSBP3-205ENST00000417664 HIGD1CA8MV81 97 aa12.8□□□□□ -0.36
SSBP3-205ENST00000417664 HLA-DQA1P01909 254 aa12.8□□□□□ -0.36
SSBP3-205ENST00000417664 HLA-DMBP28068 263 aa12.8□□□□□ -0.36
SSBP3-205ENST00000417664 CDX1P47902 265 aaPredicted RBP12.8□□□□□ -0.36
SSBP3-205ENST00000417664 COA6Q5JTJ3 125 aaKnown RBP12.8□□□□□ -0.36
SSBP3-205ENST00000417664 KLHDC1Q8N7A1 406 aa12.8□□□□□ -0.36
SSBP3-205ENST00000417664 NRN1Q9NPD7 142 aa12.8□□□□□ -0.36
SSBP3-205ENST00000417664 PPP1R14DQ9NXH3 145 aa12.8□□□□□ -0.36
SSBP3-205ENST00000417664 FAM181BA6NEQ2 426 aa12.79□□□□□ -0.36
SSBP3-205ENST00000417664 ZNF705FA8MVS1 300 aaPredicted RBP12.79□□□□□ -0.36
SSBP3-205ENST00000417664 A8MWP6 167 aa12.79□□□□□ -0.36
SSBP3-205ENST00000417664 FOXA3P55318 350 aaPredicted RBP12.79□□□□□ -0.36
SSBP3-205ENST00000417664 TM4SF20Q53R12 229 aa12.79□□□□□ -0.36
SSBP3-205ENST00000417664 IGFL4Q6B9Z1 124 aa12.79□□□□□ -0.36
SSBP3-205ENST00000417664 WFDC12Q8WWY7 111 aa12.79□□□□□ -0.36
SSBP3-205ENST00000417664 VGLL1Q99990 258 aa12.79□□□□□ -0.36
SSBP3-205ENST00000417664 GCN1Q92616 2671 aaKnown RBP12.78□□□□□ -0.36
SSBP3-205ENST00000417664 ZNF469Q96JG9 3925 aaPredicted RBP12.78□□□□□ -0.36
SSBP3-205ENST00000417664 SNURFLB1AK76 121 aa12.78□□□□□ -0.36
SSBP3-205ENST00000417664 S100A8P05109 93 aa12.78□□□□□ -0.36
SSBP3-205ENST00000417664 CBLN1P23435 193 aa12.78□□□□□ -0.36
SSBP3-205ENST00000417664 FAM162BQ5T6X4 162 aa12.78□□□□□ -0.36
SSBP3-205ENST00000417664 RBPMS2Q6ZRY4 209 aaKnown RBP12.78□□□□□ -0.36
SSBP3-205ENST00000417664 RNF182Q8N6D2 247 aa12.78□□□□□ -0.36
SSBP3-205ENST00000417664 OR2D3Q8NGH3 330 aa12.78□□□□□ -0.36
SSBP3-205ENST00000417664 TLN2Q9Y4G6 2542 aa12.78□□□□□ -0.36
SSBP3-205ENST00000417664 XKRY2A2RUG3 117 aa12.77□□□□□ -0.36
SSBP3-205ENST00000417664 SOCS3O14543 225 aa12.77□□□□□ -0.36
SSBP3-205ENST00000417664 AKR1D1P51857 326 aa12.77□□□□□ -0.36
SSBP3-205ENST00000417664 SMUG1Q53HV7 270 aa12.77□□□□□ -0.36
SSBP3-205ENST00000417664 Q6AWC8 147 aa12.77□□□□□ -0.36
SSBP3-205ENST00000417664 C9orf47Q6ZRZ4 202 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms