RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 C20orf144Q9BQM9 153 aa15.24■□□□□ 0.03
ACTB-203ENST00000417101 DNAJC4Q9NNZ3 241 aa15.24■□□□□ 0.03
ACTB-203ENST00000417101 MUC4Q99102 2169 aa15.24■□□□□ 0.03
ACTB-203ENST00000417101 TRAV6A0A075B6T7 132 aa15.23■□□□□ 0.03
ACTB-203ENST00000417101 TRAV5A0A0B4J249 113 aa15.23■□□□□ 0.03
ACTB-203ENST00000417101 LYRM1O43325 122 aa15.23■□□□□ 0.03
ACTB-203ENST00000417101 MIC13Q5XKP0 118 aa15.23■□□□□ 0.03
ACTB-203ENST00000417101 Q6ZRG5 221 aa15.23■□□□□ 0.03
ACTB-203ENST00000417101 SEC22CQ9BRL7 303 aa15.23■□□□□ 0.03
ACTB-203ENST00000417101 LINC00588Q9Y4M8 146 aa15.23■□□□□ 0.03
ACTB-203ENST00000417101 C5orf51A6NDU8 294 aa15.22■□□□□ 0.03
ACTB-203ENST00000417101 FAM24AA6NFZ4 105 aa15.22■□□□□ 0.03
ACTB-203ENST00000417101 J3KRW8 73 aa15.22■□□□□ 0.03
ACTB-203ENST00000417101 TCRBP04435 133 aa15.22■□□□□ 0.03
ACTB-203ENST00000417101 CLINT1Q14677 625 aa15.22■□□□□ 0.03
ACTB-203ENST00000417101 CCDC28AQ8IWP9 274 aa15.22■□□□□ 0.03
ACTB-203ENST00000417101 UQCC1Q9NVA1 299 aa15.22■□□□□ 0.03
ACTB-203ENST00000417101 HSPG2P98160 4391 aa15.22■□□□□ 0.03
ACTB-203ENST00000417101 TNP2Q05952 138 aa15.21■□□□□ 0.03
ACTB-203ENST00000417101 OR5I1Q13606 314 aa15.21■□□□□ 0.03
ACTB-203ENST00000417101 OR1L4Q8NGR5 311 aa15.21■□□□□ 0.03
ACTB-203ENST00000417101 ZNF431Q8TF32 576 aaPredicted RBP15.21■□□□□ 0.03
ACTB-203ENST00000417101 C11orf1Q9H5F2 150 aa15.21■□□□□ 0.03
ACTB-203ENST00000417101 NUDT15Q9NV35 164 aa15.21■□□□□ 0.03
ACTB-203ENST00000417101 WDR83OSQ9Y284 106 aa15.21■□□□□ 0.03
ACTB-203ENST00000417101 ABCA13Q86UQ4 5058 aa15.21■□□□□ 0.02
ACTB-203ENST00000417101 CT45A10P0DMU9 189 aa15.2■□□□□ 0.02
ACTB-203ENST00000417101 GUK1Q16774 197 aa15.2■□□□□ 0.02
ACTB-203ENST00000417101 SSX7Q7RTT5 188 aa15.2■□□□□ 0.02
ACTB-203ENST00000417101 C6orf223Q8N319 242 aa15.2■□□□□ 0.02
ACTB-203ENST00000417101 LRP1BQ9NZR2 4599 aa15.2■□□□□ 0.02
ACTB-203ENST00000417101 TRAV26-1A0A087WT03 109 aa15.19■□□□□ 0.02
ACTB-203ENST00000417101 TRAV12-3A0A0B4J271 114 aa15.19■□□□□ 0.02
ACTB-203ENST00000417101 PVALBP20472 110 aaPredicted RBP15.19■□□□□ 0.02
ACTB-203ENST00000417101 LEPP41159 167 aa15.19■□□□□ 0.02
ACTB-203ENST00000417101 C12orf45Q8N5I9 185 aaPredicted RBP15.19■□□□□ 0.02
ACTB-203ENST00000417101 LINC00612Q8N6U2 182 aa15.19■□□□□ 0.02
ACTB-203ENST00000417101 GNPNAT1Q96EK6 184 aaPredicted RBP15.19■□□□□ 0.02
ACTB-203ENST00000417101 C2orf50Q96LR7 162 aa15.19■□□□□ 0.02
ACTB-203ENST00000417101 ZNF586Q9NXT0 402 aa15.19■□□□□ 0.02
ACTB-203ENST00000417101 UBE2L5PA0A1B0GUS4 154 aa15.18■□□□□ 0.02
ACTB-203ENST00000417101 GAGE12BA1L429 117 aa15.18■□□□□ 0.02
ACTB-203ENST00000417101 SNURFLB1AK76 121 aa15.18■□□□□ 0.02
ACTB-203ENST00000417101 NPIPB6E9PJ23 425 aa15.18■□□□□ 0.02
ACTB-203ENST00000417101 GAGE7O76087 117 aa15.18■□□□□ 0.02
ACTB-203ENST00000417101 GAGE12FP0CL80 117 aa15.18■□□□□ 0.02
ACTB-203ENST00000417101 GAGE12GP0CL81 117 aa15.18■□□□□ 0.02
ACTB-203ENST00000417101 GAGE12IP0CL82 117 aa15.18■□□□□ 0.02
ACTB-203ENST00000417101 S100A10P60903 97 aa15.18■□□□□ 0.02
ACTB-203ENST00000417101 BAXQ07812 192 aa15.18■□□□□ 0.02
ACTB-203ENST00000417101 PFDN5Q99471 154 aa15.18■□□□□ 0.02
ACTB-203ENST00000417101 SLC39A9Q9NUM3 307 aa15.18■□□□□ 0.02
ACTB-203ENST00000417101 RLN2P04090 185 aa15.17■□□□□ 0.02
ACTB-203ENST00000417101 M6PRP20645 277 aa15.17■□□□□ 0.02
ACTB-203ENST00000417101 RPL29P47914 159 aaKnown RBP15.17■□□□□ 0.02
ACTB-203ENST00000417101 VWC2Q2TAL6 325 aa15.17■□□□□ 0.02
ACTB-203ENST00000417101 ODF3Q96PU9 254 aa15.17■□□□□ 0.02
ACTB-203ENST00000417101 A0A0J9YY99 117 aa15.16■□□□□ 0.02
ACTB-203ENST00000417101 IGSF23A1L1A6 192 aa15.16■□□□□ 0.02
ACTB-203ENST00000417101 HOXA5P20719 270 aa15.16■□□□□ 0.02
ACTB-203ENST00000417101 S100A11P31949 105 aa15.16■□□□□ 0.02
ACTB-203ENST00000417101 SULT1A1P50225 295 aa15.16■□□□□ 0.02
ACTB-203ENST00000417101 RXFP4Q8TDU9 374 aa15.16■□□□□ 0.02
ACTB-203ENST00000417101 LYRM2Q9NU23 88 aaPredicted RBP15.16■□□□□ 0.02
ACTB-203ENST00000417101 M0R3E3 92 aa15.15■□□□□ 0.02
ACTB-203ENST00000417101 ZNF253O75346 499 aa15.15■□□□□ 0.02
ACTB-203ENST00000417101 H2AFB2P0C5Z0 115 aa15.15■□□□□ 0.02
ACTB-203ENST00000417101 RAB32Q13637 225 aa15.15■□□□□ 0.02
ACTB-203ENST00000417101 STX12Q86Y82 276 aa15.15■□□□□ 0.02
ACTB-203ENST00000417101 TMEM252Q8N6L7 170 aa15.15■□□□□ 0.02
ACTB-203ENST00000417101 PYGO2Q9BRQ0 406 aa15.15■□□□□ 0.02
ACTB-203ENST00000417101 Q9H8V8 135 aa15.15■□□□□ 0.02
ACTB-203ENST00000417101 TRBV19A0A075B6N1 114 aa15.14■□□□□ 0.01
ACTB-203ENST00000417101 C16orf90A8MZG2 172 aa15.14■□□□□ 0.01
ACTB-203ENST00000417101 FGF7P21781 194 aa15.14■□□□□ 0.01
ACTB-203ENST00000417101 HBG1P69891 147 aa15.14■□□□□ 0.01
ACTB-203ENST00000417101 HBG2P69892 147 aa15.14■□□□□ 0.01
ACTB-203ENST00000417101 MRPL53Q96EL3 112 aaKnown RBP15.14■□□□□ 0.01
ACTB-203ENST00000417101 ZNF503Q96F45 646 aa15.14■□□□□ 0.01
ACTB-203ENST00000417101 ERCC8Q13216 396 aa15.13■□□□□ 0.01
ACTB-203ENST00000417101 IL15RAQ13261 267 aa15.13■□□□□ 0.01
ACTB-203ENST00000417101 Q6ZTI0 123 aa15.13■□□□□ 0.01
ACTB-203ENST00000417101 SLC25A5P05141 298 aaKnown RBP15.12■□□□□ 0.01
ACTB-203ENST00000417101 DAZ2Q13117 558 aaKnown RBP15.12■□□□□ 0.01
ACTB-203ENST00000417101 CHAC2Q8WUX2 184 aa15.12■□□□□ 0.01
ACTB-203ENST00000417101 TMPRSS5Q9H3S3 457 aa15.12■□□□□ 0.01
ACTB-203ENST00000417101 GPN1Q9HCN4 374 aaPredicted RBP15.12■□□□□ 0.01
ACTB-203ENST00000417101 TMEM14CQ9P0S9 112 aa15.12■□□□□ 0.01
ACTB-203ENST00000417101 TIMM9Q9Y5J7 89 aa15.12■□□□□ 0.01
ACTB-203ENST00000417101 FAM240BA0A1B0GVZ2 78 aa15.11■□□□□ 0.01
ACTB-203ENST00000417101 NDUFB4O95168 129 aa15.11■□□□□ 0.01
ACTB-203ENST00000417101 PYYP10082 97 aa15.11■□□□□ 0.01
ACTB-203ENST00000417101 HIST1H1EP10412 219 aaKnown RBP15.11■□□□□ 0.01
ACTB-203ENST00000417101 ATP6V1FQ16864 119 aa15.11■□□□□ 0.01
ACTB-203ENST00000417101 ESRGQ1W209 222 aa15.11■□□□□ 0.01
ACTB-203ENST00000417101 GCSAMLQ5JQS6 135 aa15.11■□□□□ 0.01
ACTB-203ENST00000417101 CCDC32Q9BV29 185 aa15.11■□□□□ 0.01
ACTB-203ENST00000417101 KRTAP4-5Q9BYR2 181 aa15.11■□□□□ 0.01
ACTB-203ENST00000417101 GSN-AS1Q9NRJ2 163 aa15.11■□□□□ 0.01
ACTB-203ENST00000417101 C7orf71A4D174 169 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms