RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 CHD8Q9HCK8 2581 aa10.11□□□□□ -0.79
LRRTM1-205ENST00000417012 GAGE12BA1L429 117 aa10.1□□□□□ -0.79
LRRTM1-205ENST00000417012 BUB1B-PAK6H3BSN5 160 aa10.1□□□□□ -0.79
LRRTM1-205ENST00000417012 LOC389332A0A1B0GUA5 103 aa10.1□□□□□ -0.79
LRRTM1-205ENST00000417012 D6R8Y8 96 aa10.1□□□□□ -0.79
LRRTM1-205ENST00000417012 CNIH1O95406 144 aa10.1□□□□□ -0.79
LRRTM1-205ENST00000417012 PRB4P10163 310 aaPredicted RBP10.1□□□□□ -0.79
LRRTM1-205ENST00000417012 ZNF493Q6ZR52 646 aa10.1□□□□□ -0.79
LRRTM1-205ENST00000417012 RNF125Q96EQ8 232 aa10.1□□□□□ -0.79
LRRTM1-205ENST00000417012 AP1S3Q96PC3 154 aa10.1□□□□□ -0.79
LRRTM1-205ENST00000417012 IL4P05112 153 aa10.09□□□□□ -0.79
LRRTM1-205ENST00000417012 CD3EP07766 207 aa10.09□□□□□ -0.79
LRRTM1-205ENST00000417012 APOBEC3AP31941 199 aaPredicted RBP10.09□□□□□ -0.79
LRRTM1-205ENST00000417012 CRIP1P50238 77 aa10.09□□□□□ -0.79
LRRTM1-205ENST00000417012 SIGLEC8Q9NYZ4 499 aa10.09□□□□□ -0.79
LRRTM1-205ENST00000417012 NCOR2Q9Y618 2525 aa10.09□□□□□ -0.79
LRRTM1-205ENST00000417012 K7ERU9 68 aa10.09□□□□□ -0.79
LRRTM1-205ENST00000417012 M0R3E3 92 aa10.09□□□□□ -0.79
LRRTM1-205ENST00000417012 FAM106CPP0CH98 169 aa10.09□□□□□ -0.79
LRRTM1-205ENST00000417012 COX7A1P24310 79 aa10.09□□□□□ -0.79
LRRTM1-205ENST00000417012 FAM106AQ4KMX7 169 aa10.09□□□□□ -0.79
LRRTM1-205ENST00000417012 PRELID3AQ96N28 172 aa10.09□□□□□ -0.79
LRRTM1-205ENST00000417012 SRSF8Q9BRL6 282 aaKnown RBP10.09□□□□□ -0.79
LRRTM1-205ENST00000417012 AAMDCQ9H7C9 122 aa10.09□□□□□ -0.79
LRRTM1-205ENST00000417012 SPTBN1Q01082 2364 aaKnown RBP10.09□□□□□ -0.79
LRRTM1-205ENST00000417012 A6NDN8 102 aa10.09□□□□□ -0.79
LRRTM1-205ENST00000417012 K7EIM0 57 aa10.09□□□□□ -0.79
LRRTM1-205ENST00000417012 LY6HO94772 140 aa10.09□□□□□ -0.79
LRRTM1-205ENST00000417012 LGALS9BQ3B8N2 356 aa10.09□□□□□ -0.79
LRRTM1-205ENST00000417012 LGALS9CQ6DKI2 356 aa10.09□□□□□ -0.79
LRRTM1-205ENST00000417012 ORMDL3Q8N138 153 aa10.09□□□□□ -0.79
LRRTM1-205ENST00000417012 OR1N2Q8NGR9 330 aa10.09□□□□□ -0.79
LRRTM1-205ENST00000417012 WFDC12Q8WWY7 111 aa10.09□□□□□ -0.79
LRRTM1-205ENST00000417012 C8orf49Q96NF6 230 aa10.09□□□□□ -0.79
LRRTM1-205ENST00000417012 RALYQ9UKM9 306 aaKnown RBP10.09□□□□□ -0.79
LRRTM1-205ENST00000417012 TMSB15BA0A087X1C1 80 aa10.08□□□□□ -0.8
LRRTM1-205ENST00000417012 A0A096LNJ9 63 aa10.08□□□□□ -0.8
LRRTM1-205ENST00000417012 TMEM189A5PLL7 270 aa10.08□□□□□ -0.8
LRRTM1-205ENST00000417012 GAGE10A6NGK3 116 aa10.08□□□□□ -0.8
LRRTM1-205ENST00000417012 FGF6P10767 208 aa10.08□□□□□ -0.8
LRRTM1-205ENST00000417012 UQCRFS1P47985 274 aa10.08□□□□□ -0.8
LRRTM1-205ENST00000417012 LOXL1Q08397 574 aaPredicted RBP10.08□□□□□ -0.8
LRRTM1-205ENST00000417012 LYZL1Q6UWQ5 148 aa10.08□□□□□ -0.8
LRRTM1-205ENST00000417012 ZNF491Q8N8L2 437 aa10.08□□□□□ -0.8
LRRTM1-205ENST00000417012 ZNF414Q96IQ9 312 aa10.08□□□□□ -0.8
LRRTM1-205ENST00000417012 TMEM213A2RRL7 107 aa10.08□□□□□ -0.8
LRRTM1-205ENST00000417012 FCGR2BP31994 310 aaPredicted RBP10.08□□□□□ -0.8
LRRTM1-205ENST00000417012 FOXE3Q13461 319 aa10.08□□□□□ -0.8
LRRTM1-205ENST00000417012 AMN1Q8IY45 258 aa10.08□□□□□ -0.8
LRRTM1-205ENST00000417012 RABAC1Q9UI14 185 aa10.08□□□□□ -0.8
LRRTM1-205ENST00000417012 CCL21O00585 134 aa10.07□□□□□ -0.8
LRRTM1-205ENST00000417012 CACNG7P62955 275 aa10.07□□□□□ -0.8
LRRTM1-205ENST00000417012 FAM104BQ5XKR9 115 aa10.07□□□□□ -0.8
LRRTM1-205ENST00000417012 GTF2H5Q6ZYL4 71 aa10.07□□□□□ -0.8
LRRTM1-205ENST00000417012 MEGF9Q9H1U4 602 aa10.07□□□□□ -0.8
LRRTM1-205ENST00000417012 HBDP02042 147 aa10.07□□□□□ -0.8
LRRTM1-205ENST00000417012 RNF5Q99942 180 aa10.07□□□□□ -0.8
LRRTM1-205ENST00000417012 MSRB2Q9Y3D2 182 aa10.07□□□□□ -0.8
LRRTM1-205ENST00000417012 U3KQK5 164 aa10.07□□□□□ -0.8
LRRTM1-205ENST00000417012 B9A039 149 aa10.07□□□□□ -0.8
LRRTM1-205ENST00000417012 PDE6HQ13956 83 aa10.07□□□□□ -0.8
LRRTM1-205ENST00000417012 MRPS12O15235 138 aaKnown RBP10.06□□□□□ -0.8
LRRTM1-205ENST00000417012 OR9G4Q8NGQ1 327 aa10.06□□□□□ -0.8
LRRTM1-205ENST00000417012 SELENOKQ9Y6D0 94 aa10.06□□□□□ -0.8
LRRTM1-205ENST00000417012 A1L4Q6 167 aa10.06□□□□□ -0.8
LRRTM1-205ENST00000417012 H3BRM9 83 aa10.06□□□□□ -0.8
LRRTM1-205ENST00000417012 SMAD7O15105 426 aaKnown RBP10.06□□□□□ -0.8
LRRTM1-205ENST00000417012 SH2D1AO60880 128 aa10.06□□□□□ -0.8
LRRTM1-205ENST00000417012 HSD52Q0P140 79 aa10.06□□□□□ -0.8
LRRTM1-205ENST00000417012 BOD1L2Q8IYS8 172 aa10.06□□□□□ -0.8
LRRTM1-205ENST00000417012 RAB1BQ9H0U4 201 aa10.06□□□□□ -0.8
LRRTM1-205ENST00000417012 COL12A1Q99715 3063 aa10.06□□□□□ -0.8
LRRTM1-205ENST00000417012 C9orf118A6NHY6 69 aa10.05□□□□□ -0.8
LRRTM1-205ENST00000417012 GNG7O60262 68 aa10.05□□□□□ -0.8
LRRTM1-205ENST00000417012 MRPL51Q4U2R6 128 aaKnown RBP10.05□□□□□ -0.8
LRRTM1-205ENST00000417012 PIP4P2Q8N4L2 257 aa10.05□□□□□ -0.8
LRRTM1-205ENST00000417012 THYN1Q9P016 225 aa10.05□□□□□ -0.8
LRRTM1-205ENST00000417012 TCTAP57738 103 aa10.05□□□□□ -0.8
LRRTM1-205ENST00000417012 IFI27L1Q96BM0 104 aa10.05□□□□□ -0.8
LRRTM1-205ENST00000417012 ZFHX3Q15911 3703 aa10.05□□□□□ -0.8
LRRTM1-205ENST00000417012 PPIAL4CA0A0B4J2A2 164 aa10.04□□□□□ -0.8
LRRTM1-205ENST00000417012 WI2-2373I1.2A0A1W2PRP0 233 aa10.04□□□□□ -0.8
LRRTM1-205ENST00000417012 PPIAL4GP0DN37 164 aa10.04□□□□□ -0.8
LRRTM1-205ENST00000417012 IGFBPL1Q8WX77 278 aa10.04□□□□□ -0.8
LRRTM1-205ENST00000417012 MED13LQ71F56 2210 aa10.04□□□□□ -0.8
LRRTM1-205ENST00000417012 TIMM23O14925 209 aa10.04□□□□□ -0.8
LRRTM1-205ENST00000417012 CKS2P33552 79 aa10.04□□□□□ -0.8
LRRTM1-205ENST00000417012 FXYD7P58549 80 aa10.04□□□□□ -0.8
LRRTM1-205ENST00000417012 S4R3C0 116 aa10.04□□□□□ -0.8
LRRTM1-205ENST00000417012 OR4X2Q8NGF9 303 aa10.04□□□□□ -0.8
LRRTM1-205ENST00000417012 HILPDAQ9Y5L2 63 aa10.04□□□□□ -0.8
LRRTM1-205ENST00000417012 H3BUT2 72 aa10.03□□□□□ -0.8
LRRTM1-205ENST00000417012 SIVA1O15304 175 aa10.03□□□□□ -0.8
LRRTM1-205ENST00000417012 NMUP48645 174 aa10.03□□□□□ -0.8
LRRTM1-205ENST00000417012 KIR3DS1Q14943 382 aa10.03□□□□□ -0.8
LRRTM1-205ENST00000417012 UFSP1Q6NVU6 142 aa10.03□□□□□ -0.8
LRRTM1-205ENST00000417012 IGKV2-40A0A087WW87 121 aaPredicted RBP10.03□□□□□ -0.8
LRRTM1-205ENST00000417012 NBR2O15453 112 aa10.03□□□□□ -0.8
LRRTM1-205ENST00000417012 IGKV2D-40P01614 121 aaPredicted RBP10.03□□□□□ -0.8
LRRTM1-205ENST00000417012 TWIST1Q15672 202 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms