RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 SMIM9A6NGZ8 99 aa13.03□□□□□ -0.32
SEMA3B-201ENST00000416295 DEFB4AO15263 64 aa13.03□□□□□ -0.32
SEMA3B-201ENST00000416295 INSP01308 110 aa13.03□□□□□ -0.32
SEMA3B-201ENST00000416295 OR10J4P0C629 311 aa13.03□□□□□ -0.32
SEMA3B-201ENST00000416295 ATP6V0CP27449 155 aa13.03□□□□□ -0.32
SEMA3B-201ENST00000416295 UBE2L3P68036 154 aaKnown RBP13.03□□□□□ -0.32
SEMA3B-201ENST00000416295 SERF2P84101 59 aa13.03□□□□□ -0.32
SEMA3B-201ENST00000416295 GNPNAT1Q96EK6 184 aaPredicted RBP13.03□□□□□ -0.32
SEMA3B-201ENST00000416295 IGHV3OR16-12A0A075B7B8 117 aa13.02□□□□□ -0.33
SEMA3B-201ENST00000416295 CXorf65A6NEN9 183 aa13.02□□□□□ -0.33
SEMA3B-201ENST00000416295 M0R2Z0 102 aa13.02□□□□□ -0.33
SEMA3B-201ENST00000416295 TAAR5O14804 337 aa13.02□□□□□ -0.33
SEMA3B-201ENST00000416295 MBP02144 154 aa13.02□□□□□ -0.33
SEMA3B-201ENST00000416295 RBMY1A1P0DJD3 496 aaKnown RBP13.02□□□□□ -0.33
SEMA3B-201ENST00000416295 RBMY1CP0DJD4 496 aa13.02□□□□□ -0.33
SEMA3B-201ENST00000416295 RAB2AP61019 212 aa13.02□□□□□ -0.33
SEMA3B-201ENST00000416295 RBMY1FQ15415 496 aaKnown RBP13.02□□□□□ -0.33
SEMA3B-201ENST00000416295 RPL7L1Q6DKI1 246 aaKnown RBP13.02□□□□□ -0.33
SEMA3B-201ENST00000416295 OR10G4Q8NGN3 311 aa13.02□□□□□ -0.33
SEMA3B-201ENST00000416295 OR10G9Q8NGN4 311 aa13.02□□□□□ -0.33
SEMA3B-201ENST00000416295 OR10G7Q8NGN6 311 aa13.02□□□□□ -0.33
SEMA3B-201ENST00000416295 C11orf45Q8TAV5 145 aa13.02□□□□□ -0.33
SEMA3B-201ENST00000416295 LCE6AA0A183 80 aa13.01□□□□□ -0.33
SEMA3B-201ENST00000416295 PRAC2D3DTV9 90 aa13.01□□□□□ -0.33
SEMA3B-201ENST00000416295 SMLR1H3BR10 107 aa13.01□□□□□ -0.33
SEMA3B-201ENST00000416295 M0R3E3 92 aa13.01□□□□□ -0.33
SEMA3B-201ENST00000416295 PRB4P10163 310 aaPredicted RBP13.01□□□□□ -0.33
SEMA3B-201ENST00000416295 PMS2P11Q13670 270 aa13.01□□□□□ -0.33
SEMA3B-201ENST00000416295 FAM122CQ6P4D5 195 aa13.01□□□□□ -0.33
SEMA3B-201ENST00000416295 PQLC2Q6ZP29 291 aa13.01□□□□□ -0.33
SEMA3B-201ENST00000416295 C1orf158Q8N1D5 194 aa13.01□□□□□ -0.33
SEMA3B-201ENST00000416295 EXOC3-AS1Q8N2X6 119 aa13.01□□□□□ -0.33
SEMA3B-201ENST00000416295 ZNF503Q96F45 646 aa13.01□□□□□ -0.33
SEMA3B-201ENST00000416295 TMEM208Q9BTX3 173 aa13.01□□□□□ -0.33
SEMA3B-201ENST00000416295 TENM2Q9NT68 2774 aa13.01□□□□□ -0.33
SEMA3B-201ENST00000416295 TMEM189A5PLL7 270 aa13□□□□□ -0.33
SEMA3B-201ENST00000416295 NUPR2A6NF83 97 aa13□□□□□ -0.33
SEMA3B-201ENST00000416295 NPIPB6E9PJ23 425 aa13□□□□□ -0.33
SEMA3B-201ENST00000416295 CRXO43186 299 aaPredicted RBP13□□□□□ -0.33
SEMA3B-201ENST00000416295 JTBO76095 146 aa13□□□□□ -0.33
SEMA3B-201ENST00000416295 TSPOP30536 169 aa13□□□□□ -0.33
SEMA3B-201ENST00000416295 CDKN1BP46527 198 aa13□□□□□ -0.33
SEMA3B-201ENST00000416295 ZNF345Q14585 488 aa13□□□□□ -0.33
SEMA3B-201ENST00000416295 ICAM4Q14773 271 aa13□□□□□ -0.33
SEMA3B-201ENST00000416295 BAP18Q8IXM2 172 aa13□□□□□ -0.33
SEMA3B-201ENST00000416295 LYPD1Q8N2G4 141 aa13□□□□□ -0.33
SEMA3B-201ENST00000416295 SH3BGRL3Q9H299 93 aa13□□□□□ -0.33
SEMA3B-201ENST00000416295 HMSDA8MTL9 139 aa12.99□□□□□ -0.33
SEMA3B-201ENST00000416295 HBE1P02100 147 aa12.99□□□□□ -0.33
SEMA3B-201ENST00000416295 CDC34P49427 236 aaPredicted RBP12.99□□□□□ -0.33
SEMA3B-201ENST00000416295 PHYHIPLQ96FC7 376 aa12.99□□□□□ -0.33
SEMA3B-201ENST00000416295 ODF3Q96PU9 254 aa12.99□□□□□ -0.33
SEMA3B-201ENST00000416295 TRAV12-2A0A075B6T6 113 aa12.98□□□□□ -0.33
SEMA3B-201ENST00000416295 RANP62826 216 aaKnown RBP12.98□□□□□ -0.33
SEMA3B-201ENST00000416295 RPP25LQ8N5L8 163 aaKnown RBP12.98□□□□□ -0.33
SEMA3B-201ENST00000416295 DYNC2H1Q8NCM8 4307 aaKnown RBP12.97□□□□□ -0.33
SEMA3B-201ENST00000416295 LEPP41159 167 aa12.97□□□□□ -0.33
SEMA3B-201ENST00000416295 CSN1S1P47710 185 aa12.97□□□□□ -0.33
SEMA3B-201ENST00000416295 NANOS2P60321 138 aaKnown RBP12.97□□□□□ -0.33
SEMA3B-201ENST00000416295 RRN3P1Q2M238 152 aa12.97□□□□□ -0.33
SEMA3B-201ENST00000416295 TMEM256Q8N2U0 113 aa12.97□□□□□ -0.33
SEMA3B-201ENST00000416295 KCNRGQ8N5I3 272 aa12.97□□□□□ -0.33
SEMA3B-201ENST00000416295 RAB24Q969Q5 203 aa12.97□□□□□ -0.33
SEMA3B-201ENST00000416295 Q9H3A6 140 aa12.97□□□□□ -0.33
SEMA3B-201ENST00000416295 EIF3GO75821 320 aaKnown RBP eCLIP12.96□□□□□ -0.33
SEMA3B-201ENST00000416295 CEMP1Q6PRD7 247 aaPredicted RBP12.96□□□□□ -0.33
SEMA3B-201ENST00000416295 Q6ZNX1 250 aa12.96□□□□□ -0.33
SEMA3B-201ENST00000416295 OR11H4Q8NGC9 324 aa12.96□□□□□ -0.33
SEMA3B-201ENST00000416295 PHLDA1Q8WV24 401 aaPredicted RBP12.96□□□□□ -0.33
SEMA3B-201ENST00000416295 LINC00477Q96M19 166 aa12.96□□□□□ -0.33
SEMA3B-201ENST00000416295 ARPC5LQ9BPX5 153 aa12.96□□□□□ -0.33
SEMA3B-201ENST00000416295 C20orf144Q9BQM9 153 aa12.96□□□□□ -0.33
SEMA3B-201ENST00000416295 ACTR3CQ9C0K3 210 aaPredicted RBP12.96□□□□□ -0.33
SEMA3B-201ENST00000416295 A0A0D9SG52 128 aa12.95□□□□□ -0.34
SEMA3B-201ENST00000416295 TEX48A0A1B0GUV7 120 aa12.95□□□□□ -0.34
SEMA3B-201ENST00000416295 LOC102723971A0A1B0GUV8 181 aa12.95□□□□□ -0.34
SEMA3B-201ENST00000416295 HMGB3O15347 200 aaKnown RBP12.95□□□□□ -0.34
SEMA3B-201ENST00000416295 STAG3L2P0CL84 134 aa12.95□□□□□ -0.34
SEMA3B-201ENST00000416295 STAG3L3P0CL85 134 aa12.95□□□□□ -0.34
SEMA3B-201ENST00000416295 ARL14EPLP0DKL9 152 aa12.95□□□□□ -0.34
SEMA3B-201ENST00000416295 CT45A10P0DMU9 189 aa12.95□□□□□ -0.34
SEMA3B-201ENST00000416295 FAM74A1Q5RGS3 127 aa12.95□□□□□ -0.34
SEMA3B-201ENST00000416295 C9orf47Q6ZRZ4 202 aa12.95□□□□□ -0.34
SEMA3B-201ENST00000416295 OTORQ9NRC9 128 aa12.95□□□□□ -0.34
SEMA3B-201ENST00000416295 CYTL1Q9NRR1 136 aa12.95□□□□□ -0.34
SEMA3B-201ENST00000416295 KLK5Q9Y337 293 aaPredicted RBP12.95□□□□□ -0.34
SEMA3B-201ENST00000416295 CSMD3Q7Z407 3707 aa12.94□□□□□ -0.34
SEMA3B-201ENST00000416295 IGKV2-40A0A087WW87 121 aaPredicted RBP12.94□□□□□ -0.34
SEMA3B-201ENST00000416295 IGKV2D-40P01614 121 aaPredicted RBP12.94□□□□□ -0.34
SEMA3B-201ENST00000416295 EMP1P54849 157 aa12.94□□□□□ -0.34
SEMA3B-201ENST00000416295 TMEM78Q5T7P6 136 aa12.94□□□□□ -0.34
SEMA3B-201ENST00000416295 RXFP4Q8TDU9 374 aa12.94□□□□□ -0.34
SEMA3B-201ENST00000416295 LINC01587Q99440 93 aa12.94□□□□□ -0.34
SEMA3B-201ENST00000416295 C11orf94C9JXX5 98 aa12.93□□□□□ -0.34
SEMA3B-201ENST00000416295 SPART-AS1P0CW21 52 aa12.93□□□□□ -0.34
SEMA3B-201ENST00000416295 TAS2R60P59551 318 aa12.93□□□□□ -0.34
SEMA3B-201ENST00000416295 ERCC8Q13216 396 aa12.93□□□□□ -0.34
SEMA3B-201ENST00000416295 AKR1C8PQ5T2L2 129 aa12.93□□□□□ -0.34
SEMA3B-201ENST00000416295 GFI1BQ5VTD9 330 aa12.93□□□□□ -0.34
SEMA3B-201ENST00000416295 AGPAT4-IT1Q9H0P7 198 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms