RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 SRRM4A7MD48 611 aaKnown RBP10.45□□□□□ -0.74
SCN1B-202ENST00000415950 PAX1P15863 534 aa10.45□□□□□ -0.74
SCN1B-202ENST00000415950 TRAV8-4A0A0B4J246 113 aa10.44□□□□□ -0.74
SCN1B-202ENST00000415950 A0A1B0GWJ7 208 aa10.44□□□□□ -0.74
SCN1B-202ENST00000415950 RNASE2P10153 161 aaKnown RBP10.44□□□□□ -0.74
SCN1B-202ENST00000415950 YPEL3P61236 119 aaPredicted RBP10.44□□□□□ -0.74
SCN1B-202ENST00000415950 TMEM167AQ8TBQ9 72 aa10.44□□□□□ -0.74
SCN1B-202ENST00000415950 PAX8Q06710 450 aa10.44□□□□□ -0.74
SCN1B-202ENST00000415950 Q0VG73 95 aa10.44□□□□□ -0.74
SCN1B-202ENST00000415950 C3orf36Q3SXR2 165 aa10.44□□□□□ -0.74
SCN1B-202ENST00000415950 SPACA3Q8IXA5 215 aa10.44□□□□□ -0.74
SCN1B-202ENST00000415950 C11orf68Q9H3H3 251 aaKnown RBP10.44□□□□□ -0.74
SCN1B-202ENST00000415950 IGHV2-26A0A0B4J1V2 119 aa10.44□□□□□ -0.74
SCN1B-202ENST00000415950 Q6ZPA2 131 aa10.44□□□□□ -0.74
SCN1B-202ENST00000415950 RPRMLQ8N4K4 120 aa10.44□□□□□ -0.74
SCN1B-202ENST00000415950 NEU4Q8WWR8 484 aaPredicted RBP10.44□□□□□ -0.74
SCN1B-202ENST00000415950 ZNF625Q96I27 306 aaPredicted RBP10.44□□□□□ -0.74
SCN1B-202ENST00000415950 USP9YO00507 2555 aaPredicted RBP10.43□□□□□ -0.74
SCN1B-202ENST00000415950 FRMPD3Q5JV73 1810 aa10.43□□□□□ -0.74
SCN1B-202ENST00000415950 FAM90A9PA6NNJ1 464 aa10.43□□□□□ -0.74
SCN1B-202ENST00000415950 SH2D1AO60880 128 aa10.43□□□□□ -0.74
SCN1B-202ENST00000415950 COL8A2P25067 703 aa10.43□□□□□ -0.74
SCN1B-202ENST00000415950 TRAV40A0A0B4J280 105 aa10.43□□□□□ -0.74
SCN1B-202ENST00000415950 M0R2P5 195 aa10.43□□□□□ -0.74
SCN1B-202ENST00000415950 IGHV1-8P0DP01 117 aa10.43□□□□□ -0.74
SCN1B-202ENST00000415950 CEACAM8P31997 349 aaPredicted RBP10.43□□□□□ -0.74
SCN1B-202ENST00000415950 CFHR2P36980 270 aa10.43□□□□□ -0.74
SCN1B-202ENST00000415950 VDAC2P45880 294 aaPredicted RBP10.43□□□□□ -0.74
SCN1B-202ENST00000415950 WNT2P09544 360 aa10.42□□□□□ -0.74
SCN1B-202ENST00000415950 LMO1P25800 156 aa10.42□□□□□ -0.74
SCN1B-202ENST00000415950 CHCHD5Q9BSY4 110 aa10.42□□□□□ -0.74
SCN1B-202ENST00000415950 LINC00158P58513 81 aa10.42□□□□□ -0.74
SCN1B-202ENST00000415950 CFAP161Q6P656 301 aa10.42□□□□□ -0.74
SCN1B-202ENST00000415950 ADAMTSL5Q6ZMM2 481 aa10.42□□□□□ -0.74
SCN1B-202ENST00000415950 IGHV1-3A0A0C4DH29 117 aa10.42□□□□□ -0.74
SCN1B-202ENST00000415950 TMEM213A2RRL7 107 aa10.42□□□□□ -0.74
SCN1B-202ENST00000415950 ZNF672Q499Z4 452 aaPredicted RBP10.42□□□□□ -0.74
SCN1B-202ENST00000415950 ZFAND6Q6FIF0 208 aa10.42□□□□□ -0.74
SCN1B-202ENST00000415950 CST9LQ9H4G1 147 aa10.42□□□□□ -0.74
SCN1B-202ENST00000415950 FAM231BA6NCW3 169 aa10.41□□□□□ -0.74
SCN1B-202ENST00000415950 LYPD2Q6UXB3 125 aa10.41□□□□□ -0.74
SCN1B-202ENST00000415950 LY6G6EA0A0G2JKS1 128 aa10.41□□□□□ -0.74
SCN1B-202ENST00000415950 RBMY1BA6NDE4 496 aaKnown RBP10.41□□□□□ -0.74
SCN1B-202ENST00000415950 RBMY1EA6NEQ0 496 aaKnown RBP10.41□□□□□ -0.74
SCN1B-202ENST00000415950 RBMY1DP0C7P1 496 aaKnown RBP10.41□□□□□ -0.74
SCN1B-202ENST00000415950 RBMY1A1P0DJD3 496 aaKnown RBP10.41□□□□□ -0.74
SCN1B-202ENST00000415950 RBMY1CP0DJD4 496 aa10.41□□□□□ -0.74
SCN1B-202ENST00000415950 DIAPH2-AS1Q14236 149 aa10.41□□□□□ -0.74
SCN1B-202ENST00000415950 ETDBQ3ZM63 59 aa10.41□□□□□ -0.74
SCN1B-202ENST00000415950 SIGLEC15Q6ZMC9 328 aa10.41□□□□□ -0.74
SCN1B-202ENST00000415950 MRPL27Q9P0M9 148 aaKnown RBP10.41□□□□□ -0.74
SCN1B-202ENST00000415950 U3KQA8 63 aa10.41□□□□□ -0.74
SCN1B-202ENST00000415950 CHD7Q9P2D1 2997 aa10.41□□□□□ -0.74
SCN1B-202ENST00000415950 A0A087WWL8 130 aa10.41□□□□□ -0.74
SCN1B-202ENST00000415950 H0YJW9 148 aa10.41□□□□□ -0.74
SCN1B-202ENST00000415950 CD5LO43866 347 aa10.41□□□□□ -0.74
SCN1B-202ENST00000415950 FCN3O75636 299 aa10.41□□□□□ -0.74
SCN1B-202ENST00000415950 ZNF329Q86UD4 541 aa10.41□□□□□ -0.74
SCN1B-202ENST00000415950 GATD1Q8NB37 220 aa10.41□□□□□ -0.74
SCN1B-202ENST00000415950 PYGO2Q9BRQ0 406 aa10.41□□□□□ -0.74
SCN1B-202ENST00000415950 KIF26AQ9ULI4 1882 aaPredicted RBP10.4□□□□□ -0.74
SCN1B-202ENST00000415950 USP9XQ93008 2570 aaPredicted RBP10.4□□□□□ -0.74
SCN1B-202ENST00000415950 ESDP10768 282 aa10.4□□□□□ -0.74
SCN1B-202ENST00000415950 BRD3OSQ6XYD6 125 aa10.4□□□□□ -0.74
SCN1B-202ENST00000415950 LINC00173Q6ZV60 143 aa10.4□□□□□ -0.74
SCN1B-202ENST00000415950 RNASE8Q8TDE3 154 aaKnown RBP10.4□□□□□ -0.74
SCN1B-202ENST00000415950 CCL25O15444 150 aa10.4□□□□□ -0.74
SCN1B-202ENST00000415950 IGHV3-53P01767 116 aa10.4□□□□□ -0.74
SCN1B-202ENST00000415950 IGFBPL1Q8WX77 278 aa10.4□□□□□ -0.74
SCN1B-202ENST00000415950 SLC25A2Q9BXI2 301 aa10.4□□□□□ -0.74
SCN1B-202ENST00000415950 SMPXQ9UHP9 88 aa10.4□□□□□ -0.74
SCN1B-202ENST00000415950 TRGV4A0A0C4DH28 118 aa10.4□□□□□ -0.75
SCN1B-202ENST00000415950 HIST1H4AP62805 103 aaKnown RBP10.4□□□□□ -0.75
SCN1B-202ENST00000415950 CHAC1Q9BUX1 264 aa10.4□□□□□ -0.75
SCN1B-202ENST00000415950 TPSG1Q9NRR2 321 aa10.4□□□□□ -0.75
SCN1B-202ENST00000415950 A0A1W2PPI3 338 aa10.39□□□□□ -0.75
SCN1B-202ENST00000415950 SSBP2P81877 361 aaPredicted RBP10.39□□□□□ -0.75
SCN1B-202ENST00000415950 ERCC8Q13216 396 aa10.39□□□□□ -0.75
SCN1B-202ENST00000415950 ATXN8Q156A1 80 aa10.39□□□□□ -0.75
SCN1B-202ENST00000415950 TEX43Q6ZNM6 134 aa10.39□□□□□ -0.75
SCN1B-202ENST00000415950 TRGV9Q99603 122 aa10.39□□□□□ -0.75
SCN1B-202ENST00000415950 CSTL1Q9H114 145 aa10.39□□□□□ -0.75
SCN1B-202ENST00000415950 XIRP2A4UGR9 3374 aa10.39□□□□□ -0.75
SCN1B-202ENST00000415950 C2orf82Q6UX34 121 aa10.39□□□□□ -0.75
SCN1B-202ENST00000415950 PRUNE2Q8WUY3 3088 aa10.39□□□□□ -0.75
SCN1B-202ENST00000415950 BPTFQ12830 3046 aa10.39□□□□□ -0.75
SCN1B-202ENST00000415950 TRAV8-3A0A0A6YYJ7 113 aa10.39□□□□□ -0.75
SCN1B-202ENST00000415950 PAX4O43316 350 aa10.39□□□□□ -0.75
SCN1B-202ENST00000415950 SPINK8P0C7L1 97 aa10.39□□□□□ -0.75
SCN1B-202ENST00000415950 ZNF883P0CG24 379 aa10.39□□□□□ -0.75
SCN1B-202ENST00000415950 MALP21145 153 aa10.39□□□□□ -0.75
SCN1B-202ENST00000415950 COA6Q5JTJ3 125 aaKnown RBP10.39□□□□□ -0.75
SCN1B-202ENST00000415950 STHQ8IWL8 128 aa10.39□□□□□ -0.75
SCN1B-202ENST00000415950 DLX4Q92988 240 aaPredicted RBP10.39□□□□□ -0.75
SCN1B-202ENST00000415950 C1orf159Q96HA4 380 aa10.39□□□□□ -0.75
SCN1B-202ENST00000415950 ZNF48Q96MX3 618 aaPredicted RBP10.39□□□□□ -0.75
SCN1B-202ENST00000415950 SIGLEC9Q9Y336 463 aa10.39□□□□□ -0.75
SCN1B-202ENST00000415950 C9JAW5 83 aa10.39□□□□□ -0.75
SCN1B-202ENST00000415950 MORN5Q5VZ52 161 aa10.39□□□□□ -0.75
SCN1B-202ENST00000415950 ODF3L1Q8IXM7 274 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms