RNA–Protein interactions for RNA: ENST00000415172.1

VPS13A-AS1-201, VPS13A antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS13A-AS1, Length 519 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-AS1-201ENST00000415172 FXYD5Q96DB9 178 aa12.6□□□□□ -0.39
VPS13A-AS1-201ENST00000415172 GNPNAT1Q96EK6 184 aaPredicted RBP12.6□□□□□ -0.39
VPS13A-AS1-201ENST00000415172 PRELID1Q9Y255 219 aa12.6□□□□□ -0.39
VPS13A-AS1-201ENST00000415172 GOLT1BQ9Y3E0 138 aa12.6□□□□□ -0.39
VPS13A-AS1-201ENST00000415172 X6R8D5 127 aa12.6□□□□□ -0.39
VPS13A-AS1-201ENST00000415172 AGRNO00468 2067 aa12.59□□□□□ -0.39
VPS13A-AS1-201ENST00000415172 IGHV4-28A0A0C4DH34 117 aa12.59□□□□□ -0.39
VPS13A-AS1-201ENST00000415172 TAAR5O14804 337 aa12.59□□□□□ -0.39
VPS13A-AS1-201ENST00000415172 MBP02144 154 aa12.59□□□□□ -0.39
VPS13A-AS1-201ENST00000415172 PRB4P10163 310 aaPredicted RBP12.59□□□□□ -0.39
VPS13A-AS1-201ENST00000415172 SERF2P84101 59 aa12.59□□□□□ -0.39
VPS13A-AS1-201ENST00000415172 SPINK13Q1W4C9 94 aa12.59□□□□□ -0.39
VPS13A-AS1-201ENST00000415172 FAM122CQ6P4D5 195 aa12.59□□□□□ -0.39
VPS13A-AS1-201ENST00000415172 ZNF705AQ6ZN79 300 aaPredicted RBP12.59□□□□□ -0.39
VPS13A-AS1-201ENST00000415172 IGHV3OR16-12A0A075B7B8 117 aa12.58□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 M0R2Z0 102 aa12.58□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 DEFB4AO15263 64 aa12.58□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 JTBO76095 146 aa12.58□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 INSP01308 110 aa12.58□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 IGF2BP2-AS1Q96M15 143 aa12.58□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 SH3BGRL3Q9H299 93 aa12.58□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 TENM2Q9NT68 2774 aa12.58□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 SACSQ9NZJ4 4579 aa12.58□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 CXorf65A6NEN9 183 aa12.57□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 PRAC2D3DTV9 90 aa12.57□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 M0R3E3 92 aa12.57□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 CDC34P49427 236 aaPredicted RBP12.57□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 ZNF345Q14585 488 aa12.57□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 ICAM4Q14773 271 aa12.57□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 PQLC2Q6ZP29 291 aa12.57□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 EXOC3-AS1Q8N2X6 119 aa12.57□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 ZNF503Q96F45 646 aa12.57□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 PHYHIPLQ96FC7 376 aa12.57□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 NEU1Q99519 415 aa12.57□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 TMEM208Q9BTX3 173 aa12.57□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 SMIM9A6NGZ8 99 aa12.56□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 HMSDA8MTL9 139 aa12.56□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 CDKN1BP46527 198 aa12.56□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 Q6ZNX1 250 aa12.56□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 C11orf45Q8TAV5 145 aa12.56□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 ARPC5LQ9BPX5 153 aa12.56□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 EIF3GO75821 320 aaKnown RBP eCLIP12.55□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 RBMY1A1P0DJD3 496 aaKnown RBP12.55□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 RBMY1CP0DJD4 496 aa12.55□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 TSPOP30536 169 aa12.55□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 PMS2P11Q13670 270 aa12.55□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 RBMY1FQ15415 496 aaKnown RBP12.55□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 BAP18Q8IXM2 172 aa12.55□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 C1orf158Q8N1D5 194 aa12.55□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 LYPD1Q8N2G4 141 aa12.55□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 KCNRGQ8N5I3 272 aa12.55□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 RPP25LQ8N5L8 163 aaKnown RBP12.55□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 OR11H4Q8NGC9 324 aa12.55□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 TRAV12-2A0A075B6T6 113 aa12.54□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 NPIPB6E9PJ23 425 aa12.54□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 HMGB3O15347 200 aaKnown RBP12.54□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 CRXO43186 299 aaPredicted RBP12.54□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 HBE1P02100 147 aa12.54□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 RANP62826 216 aaKnown RBP12.54□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 ODF3Q96PU9 254 aa12.54□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 Q9H3A6 140 aa12.54□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 A0A0D9SG52 128 aa12.53□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 TMEM189A5PLL7 270 aa12.53□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 STAG3L2P0CL84 134 aa12.53□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 STAG3L3P0CL85 134 aa12.53□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 CSN1S1P47710 185 aa12.53□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 RAB24Q969Q5 203 aa12.53□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 ACTR3CQ9C0K3 210 aaPredicted RBP12.53□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 CYTL1Q9NRR1 136 aa12.53□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 EPPK1P58107 5090 aaKnown RBP12.53□□□□□ -0.4
VPS13A-AS1-201ENST00000415172 KANTRA0A1W2PQU2 76 aa12.52□□□□□ -0.41
VPS13A-AS1-201ENST00000415172 NUPR2A6NF83 97 aa12.52□□□□□ -0.41
VPS13A-AS1-201ENST00000415172 ARL14EPLP0DKL9 152 aa12.52□□□□□ -0.41
VPS13A-AS1-201ENST00000415172 LEPP41159 167 aa12.52□□□□□ -0.41
VPS13A-AS1-201ENST00000415172 RRN3P1Q2M238 152 aa12.52□□□□□ -0.41
VPS13A-AS1-201ENST00000415172 FAM74A1Q5RGS3 127 aa12.52□□□□□ -0.41
VPS13A-AS1-201ENST00000415172 AKR1C8PQ5T2L2 129 aa12.52□□□□□ -0.41
VPS13A-AS1-201ENST00000415172 TMEM256Q8N2U0 113 aa12.52□□□□□ -0.41
VPS13A-AS1-201ENST00000415172 ST6GAL2Q96JF0 529 aa12.52□□□□□ -0.41
VPS13A-AS1-201ENST00000415172 DNAH1Q9P2D7 4330 aa12.51□□□□□ -0.41
VPS13A-AS1-201ENST00000415172 CT45A10P0DMU9 189 aa12.51□□□□□ -0.41
VPS13A-AS1-201ENST00000415172 NANOS2P60321 138 aaKnown RBP12.51□□□□□ -0.41
VPS13A-AS1-201ENST00000415172 ERCC8Q13216 396 aa12.51□□□□□ -0.41
VPS13A-AS1-201ENST00000415172 TMEM78Q5T7P6 136 aa12.51□□□□□ -0.41
VPS13A-AS1-201ENST00000415172 TCTE3Q8IZS6 198 aa12.51□□□□□ -0.41
VPS13A-AS1-201ENST00000415172 LINC00477Q96M19 166 aa12.51□□□□□ -0.41
VPS13A-AS1-201ENST00000415172 LYSTQ99698 3801 aa12.51□□□□□ -0.41
VPS13A-AS1-201ENST00000415172 CSMD3Q7Z407 3707 aa12.5□□□□□ -0.41
VPS13A-AS1-201ENST00000415172 hCG_2014768A0A024R1R8 64 aa12.5□□□□□ -0.41
VPS13A-AS1-201ENST00000415172 IGKV2-40A0A087WW87 121 aaPredicted RBP12.5□□□□□ -0.41
VPS13A-AS1-201ENST00000415172 LOC102723971A0A1B0GUV8 181 aa12.5□□□□□ -0.41
VPS13A-AS1-201ENST00000415172 BCL2L11O43521 198 aa12.5□□□□□ -0.41
VPS13A-AS1-201ENST00000415172 PFDN1O60925 122 aa12.5□□□□□ -0.41
VPS13A-AS1-201ENST00000415172 CXorf1O96002 111 aa12.5□□□□□ -0.41
VPS13A-AS1-201ENST00000415172 IGKV2D-40P01614 121 aaPredicted RBP12.5□□□□□ -0.41
VPS13A-AS1-201ENST00000415172 CMTM2Q8TAZ6 248 aa12.5□□□□□ -0.41
VPS13A-AS1-201ENST00000415172 RXFP4Q8TDU9 374 aa12.5□□□□□ -0.41
VPS13A-AS1-201ENST00000415172 C20orf144Q9BQM9 153 aa12.5□□□□□ -0.41
VPS13A-AS1-201ENST00000415172 OTORQ9NRC9 128 aa12.5□□□□□ -0.41
VPS13A-AS1-201ENST00000415172 GCHFRP30047 84 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms