RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 C17orf112F2Z3M2 114 aa10.61□□□□□ -0.71
LIMS4-201ENST00000413601 PRM2P04554 102 aa10.61□□□□□ -0.71
LIMS4-201ENST00000413601 RRN3P1Q2M238 152 aa10.61□□□□□ -0.71
LIMS4-201ENST00000413601 MIR17HGQ75NE6 70 aa10.61□□□□□ -0.71
LIMS4-201ENST00000413601 OR10J6PQ8NGY7 276 aa10.61□□□□□ -0.71
LIMS4-201ENST00000413601 BLNKQ8WV28 456 aa10.61□□□□□ -0.71
LIMS4-201ENST00000413601 SLC25A2Q9BXI2 301 aa10.61□□□□□ -0.71
LIMS4-201ENST00000413601 KCNIP2Q9NS61 270 aa10.61□□□□□ -0.71
LIMS4-201ENST00000413601 ZNF705GA8MUZ8 300 aaPredicted RBP10.6□□□□□ -0.71
LIMS4-201ENST00000413601 ZNF253O75346 499 aa10.6□□□□□ -0.71
LIMS4-201ENST00000413601 IFNA5P01569 189 aa10.6□□□□□ -0.71
LIMS4-201ENST00000413601 SPART-AS1P0CW21 52 aa10.6□□□□□ -0.71
LIMS4-201ENST00000413601 HIST1H1EP10412 219 aaKnown RBP10.6□□□□□ -0.71
LIMS4-201ENST00000413601 SCGB1C1Q8TD33 95 aa10.6□□□□□ -0.71
LIMS4-201ENST00000413601 FAM167A-AS1Q96KT0 104 aa10.6□□□□□ -0.71
LIMS4-201ENST00000413601 PARD6GQ9BYG4 376 aaPredicted RBP10.6□□□□□ -0.71
LIMS4-201ENST00000413601 WFDC1Q9HC57 220 aa10.6□□□□□ -0.71
LIMS4-201ENST00000413601 TIMM9Q9Y5J7 89 aa10.6□□□□□ -0.71
LIMS4-201ENST00000413601 PLECQ15149 4684 aaKnown RBP10.6□□□□□ -0.71
LIMS4-201ENST00000413601 HYDINQ4G0P3 5121 aa10.59□□□□□ -0.71
LIMS4-201ENST00000413601 DEFB131BA0A096LNP1 70 aa10.59□□□□□ -0.71
LIMS4-201ENST00000413601 NDUFB4O95168 129 aa10.59□□□□□ -0.71
LIMS4-201ENST00000413601 CDKN1BP46527 198 aa10.59□□□□□ -0.71
LIMS4-201ENST00000413601 FFAR4Q5NUL3 377 aa10.59□□□□□ -0.71
LIMS4-201ENST00000413601 FAM222AQ5U5X8 452 aa10.59□□□□□ -0.71
LIMS4-201ENST00000413601 RPP25LQ8N5L8 163 aaKnown RBP10.59□□□□□ -0.71
LIMS4-201ENST00000413601 DKK2Q9UBU2 259 aa10.59□□□□□ -0.71
LIMS4-201ENST00000413601 YTHDF2Q9Y5A9 579 aaKnown RBP10.59□□□□□ -0.71
LIMS4-201ENST00000413601 M0R3E3 92 aa10.58□□□□□ -0.72
LIMS4-201ENST00000413601 KIR3DS1Q14943 382 aa10.58□□□□□ -0.72
LIMS4-201ENST00000413601 EXOC3-AS1Q8N2X6 119 aa10.58□□□□□ -0.72
LIMS4-201ENST00000413601 LINC01587Q99440 93 aa10.58□□□□□ -0.72
LIMS4-201ENST00000413601 MRPL32Q9BYC8 188 aaKnown RBP10.58□□□□□ -0.72
LIMS4-201ENST00000413601 OR51M1Q9H341 326 aa10.58□□□□□ -0.72
LIMS4-201ENST00000413601 APLNQ9ULZ1 77 aa10.58□□□□□ -0.72
LIMS4-201ENST00000413601 FUT9Q9Y231 359 aa10.58□□□□□ -0.72
LIMS4-201ENST00000413601 OR10J4P0C629 311 aa10.57□□□□□ -0.72
LIMS4-201ENST00000413601 TCTAP57738 103 aa10.57□□□□□ -0.72
LIMS4-201ENST00000413601 PDE6HQ13956 83 aa10.57□□□□□ -0.72
LIMS4-201ENST00000413601 LGALS9CQ6DKI2 356 aa10.57□□□□□ -0.72
LIMS4-201ENST00000413601 NIPSNAP3BQ9BS92 247 aa10.57□□□□□ -0.72
LIMS4-201ENST00000413601 PAXXQ9BUH6 204 aa10.57□□□□□ -0.72
LIMS4-201ENST00000413601 ALMS1Q8TCU4 4167 aa10.56□□□□□ -0.72
LIMS4-201ENST00000413601 IGHV4-4A0A075B6R2 117 aa10.56□□□□□ -0.72
LIMS4-201ENST00000413601 TEX48A0A1B0GUV7 120 aa10.56□□□□□ -0.72
LIMS4-201ENST00000413601 NPIPB6E9PJ23 425 aa10.56□□□□□ -0.72
LIMS4-201ENST00000413601 NBEAP1P0C6P0 100 aa10.56□□□□□ -0.72
LIMS4-201ENST00000413601 CT45A10P0DMU9 189 aa10.56□□□□□ -0.72
LIMS4-201ENST00000413601 HTN1P15515 57 aa10.56□□□□□ -0.72
LIMS4-201ENST00000413601 AZU1P20160 251 aa10.56□□□□□ -0.72
LIMS4-201ENST00000413601 TSPOP30536 169 aa10.56□□□□□ -0.72
LIMS4-201ENST00000413601 ICAM4Q14773 271 aa10.56□□□□□ -0.72
LIMS4-201ENST00000413601 RGS21Q2M5E4 152 aa10.56□□□□□ -0.72
LIMS4-201ENST00000413601 Q5BKY6 102 aa10.56□□□□□ -0.72
LIMS4-201ENST00000413601 TMEM256Q8N2U0 113 aa10.56□□□□□ -0.72
LIMS4-201ENST00000413601 FXYD5Q96DB9 178 aa10.56□□□□□ -0.72
LIMS4-201ENST00000413601 MRPL53Q96EL3 112 aaKnown RBP10.56□□□□□ -0.72
LIMS4-201ENST00000413601 AAMDCQ9H7C9 122 aa10.56□□□□□ -0.72
LIMS4-201ENST00000413601 PRELID1Q9Y255 219 aa10.56□□□□□ -0.72
LIMS4-201ENST00000413601 J3KRW8 73 aa10.55□□□□□ -0.72
LIMS4-201ENST00000413601 OR7C2O60412 319 aa10.55□□□□□ -0.72
LIMS4-201ENST00000413601 GIPP09681 153 aaPredicted RBP10.55□□□□□ -0.72
LIMS4-201ENST00000413601 ERCC8Q13216 396 aa10.55□□□□□ -0.72
LIMS4-201ENST00000413601 RNF141Q8WVD5 230 aa10.55□□□□□ -0.72
LIMS4-201ENST00000413601 ZNF503Q96F45 646 aa10.55□□□□□ -0.72
LIMS4-201ENST00000413601 PLAC8L1A1L4L8 177 aa10.54□□□□□ -0.72
LIMS4-201ENST00000413601 EIF3GO75821 320 aaKnown RBP eCLIP10.54□□□□□ -0.72
LIMS4-201ENST00000413601 TAS2R60P59551 318 aa10.54□□□□□ -0.72
LIMS4-201ENST00000413601 GFI1BQ5VTD9 330 aa10.54□□□□□ -0.72
LIMS4-201ENST00000413601 FAM122CQ6P4D5 195 aa10.54□□□□□ -0.72
LIMS4-201ENST00000413601 PHYHIPLQ96FC7 376 aa10.54□□□□□ -0.72
LIMS4-201ENST00000413601 AQP10Q96PS8 301 aa10.54□□□□□ -0.72
LIMS4-201ENST00000413601 ODF3Q96PU9 254 aa10.54□□□□□ -0.72
LIMS4-201ENST00000413601 DNAH1Q9P2D7 4330 aa10.54□□□□□ -0.72
LIMS4-201ENST00000413601 HTN3P15516 51 aa10.53□□□□□ -0.72
LIMS4-201ENST00000413601 LEPP41159 167 aa10.53□□□□□ -0.72
LIMS4-201ENST00000413601 DAD1P61803 113 aa10.53□□□□□ -0.72
LIMS4-201ENST00000413601 OXA1LQ15070 435 aa10.53□□□□□ -0.72
LIMS4-201ENST00000413601 C20orf144Q9BQM9 153 aa10.53□□□□□ -0.72
LIMS4-201ENST00000413601 AGPAT4-IT1Q9H0P7 198 aa10.53□□□□□ -0.72
LIMS4-201ENST00000413601 IGKV2-40A0A087WW87 121 aaPredicted RBP10.52□□□□□ -0.73
LIMS4-201ENST00000413601 TRAV12-3A0A0B4J271 114 aa10.52□□□□□ -0.73
LIMS4-201ENST00000413601 H7BYZ3 331 aa10.52□□□□□ -0.73
LIMS4-201ENST00000413601 IGKV2D-40P01614 121 aaPredicted RBP10.52□□□□□ -0.73
LIMS4-201ENST00000413601 RANP62826 216 aaKnown RBP10.52□□□□□ -0.73
LIMS4-201ENST00000413601 UBE2L3P68036 154 aaKnown RBP10.52□□□□□ -0.73
LIMS4-201ENST00000413601 ACOT6Q3I5F7 207 aaPredicted RBP10.52□□□□□ -0.73
LIMS4-201ENST00000413601 KHDC3LQ587J8 217 aa10.52□□□□□ -0.73
LIMS4-201ENST00000413601 ASB13Q8WXK3 278 aa10.52□□□□□ -0.73
LIMS4-201ENST00000413601 LINC00477Q96M19 166 aa10.52□□□□□ -0.73
LIMS4-201ENST00000413601 LYRM9A8MSI8 78 aa10.51□□□□□ -0.73
LIMS4-201ENST00000413601 DEFB130BP0DP73 79 aa10.51□□□□□ -0.73
LIMS4-201ENST00000413601 DEFB130AP0DP74 79 aa10.51□□□□□ -0.73
LIMS4-201ENST00000413601 M6PRP20645 277 aa10.51□□□□□ -0.73
LIMS4-201ENST00000413601 TAS2R45P59539 299 aa10.51□□□□□ -0.73
LIMS4-201ENST00000413601 RAB2AP61019 212 aa10.51□□□□□ -0.73
LIMS4-201ENST00000413601 ZNF266Q14584 549 aa10.51□□□□□ -0.73
LIMS4-201ENST00000413601 C9orf47Q6ZRZ4 202 aa10.51□□□□□ -0.73
LIMS4-201ENST00000413601 HSD17B11Q8NBQ5 300 aa10.51□□□□□ -0.73
LIMS4-201ENST00000413601 C16orf74Q96GX8 76 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms