RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 RPL7P18124 248 aaKnown RBP13.17□□□□□ -0.3
PTPRC-206ENST00000413409 ADMP35318 185 aa13.17□□□□□ -0.3
PTPRC-206ENST00000413409 SIGLEC15Q6ZMC9 328 aa13.17□□□□□ -0.3
PTPRC-206ENST00000413409 LINC00479Q96M42 142 aa13.17□□□□□ -0.3
PTPRC-206ENST00000413409 GPR82Q96P67 336 aa13.17□□□□□ -0.3
PTPRC-206ENST00000413409 C16orf95Q9H693 158 aa13.17□□□□□ -0.3
PTPRC-206ENST00000413409 ZNF492Q9P255 531 aa13.17□□□□□ -0.3
PTPRC-206ENST00000413409 ZNF580Q9UK33 172 aa13.17□□□□□ -0.3
PTPRC-206ENST00000413409 TRAV34A0A0B4J273 112 aa13.16□□□□□ -0.3
PTPRC-206ENST00000413409 SH2D7A6NKC9 451 aaPredicted RBP13.16□□□□□ -0.3
PTPRC-206ENST00000413409 SLC17A3O00476 420 aa13.16□□□□□ -0.3
PTPRC-206ENST00000413409 LTAP01374 205 aa13.16□□□□□ -0.3
PTPRC-206ENST00000413409 IGHV3-23P01764 117 aa13.16□□□□□ -0.3
PTPRC-206ENST00000413409 IGHG2P01859 326 aa13.16□□□□□ -0.3
PTPRC-206ENST00000413409 GPR183P32249 361 aa13.16□□□□□ -0.3
PTPRC-206ENST00000413409 CDX1P47902 265 aaPredicted RBP13.16□□□□□ -0.3
PTPRC-206ENST00000413409 RAB9AP51151 201 aa13.16□□□□□ -0.3
PTPRC-206ENST00000413409 NDUFA6P56556 154 aa13.16□□□□□ -0.3
PTPRC-206ENST00000413409 COX19Q49B96 90 aa13.16□□□□□ -0.3
PTPRC-206ENST00000413409 Q86TA4 180 aa13.16□□□□□ -0.3
PTPRC-206ENST00000413409 ARL6IP6Q8N6S5 226 aa13.16□□□□□ -0.3
PTPRC-206ENST00000413409 CMTM2Q8TAZ6 248 aa13.16□□□□□ -0.3
PTPRC-206ENST00000413409 ZNF414Q96IQ9 312 aa13.16□□□□□ -0.3
PTPRC-206ENST00000413409 CCDC140Q96MF4 163 aa13.16□□□□□ -0.3
PTPRC-206ENST00000413409 MLST8Q9BVC4 326 aa13.16□□□□□ -0.3
PTPRC-206ENST00000413409 RNASE7Q9H1E1 156 aaKnown RBP13.16□□□□□ -0.3
PTPRC-206ENST00000413409 ZFAND3Q9H8U3 227 aa13.16□□□□□ -0.3
PTPRC-206ENST00000413409 LINC01548A6NM66 108 aa13.15□□□□□ -0.3
PTPRC-206ENST00000413409 ZNF253O75346 499 aa13.15□□□□□ -0.3
PTPRC-206ENST00000413409 IGHV4-59P01825 116 aa13.15□□□□□ -0.3
PTPRC-206ENST00000413409 SMIM6P0DI80 62 aa13.15□□□□□ -0.3
PTPRC-206ENST00000413409 COA6Q5JTJ3 125 aaKnown RBP13.15□□□□□ -0.3
PTPRC-206ENST00000413409 SERTM2A0A1B0GWG4 89 aa13.14□□□□□ -0.31
PTPRC-206ENST00000413409 SMIM27A0A1W2PRY6 76 aa13.14□□□□□ -0.31
PTPRC-206ENST00000413409 H3BTX0 84 aa13.14□□□□□ -0.31
PTPRC-206ENST00000413409 SNRPCP09234 159 aaKnown RBP13.14□□□□□ -0.31
PTPRC-206ENST00000413409 TMEM75Q8N9X5 138 aa13.14□□□□□ -0.31
PTPRC-206ENST00000413409 K7EIL1 84 aa13.13□□□□□ -0.31
PTPRC-206ENST00000413409 GATCO43716 136 aaKnown RBP13.13□□□□□ -0.31
PTPRC-206ENST00000413409 PSG9Q00887 426 aa13.13□□□□□ -0.31
PTPRC-206ENST00000413409 RELQ04864 619 aaPredicted RBP13.13□□□□□ -0.31
PTPRC-206ENST00000413409 ATP5G2Q06055 141 aa13.13□□□□□ -0.31
PTPRC-206ENST00000413409 GRAMD2BQ96HH9 432 aa13.13□□□□□ -0.31
PTPRC-206ENST00000413409 RPH3ALQ9UNE2 315 aa13.13□□□□□ -0.31
PTPRC-206ENST00000413409 DNAH1Q9P2D7 4330 aa13.13□□□□□ -0.31
PTPRC-206ENST00000413409 ZNF705GA8MUZ8 300 aaPredicted RBP13.13□□□□□ -0.31
PTPRC-206ENST00000413409 K7EQM0 130 aa13.13□□□□□ -0.31
PTPRC-206ENST00000413409 MEOX2P50222 304 aa13.13□□□□□ -0.31
PTPRC-206ENST00000413409 LY6EQ16553 131 aa13.13□□□□□ -0.31
PTPRC-206ENST00000413409 CT83Q5H943 113 aa13.13□□□□□ -0.31
PTPRC-206ENST00000413409 TOMM20LQ6UXN7 152 aa13.13□□□□□ -0.31
PTPRC-206ENST00000413409 OR8I2Q8N0Y5 310 aa13.13□□□□□ -0.31
PTPRC-206ENST00000413409 HIST3H2BBQ8N257 126 aa13.13□□□□□ -0.31
PTPRC-206ENST00000413409 EXOC3-AS1Q8N2X6 119 aa13.13□□□□□ -0.31
PTPRC-206ENST00000413409 NHLRC2Q8NBF2 726 aa13.13□□□□□ -0.31
PTPRC-206ENST00000413409 TRAPPC1Q9Y5R8 145 aa13.13□□□□□ -0.31
PTPRC-206ENST00000413409 A0A087X0K7 114 aa13.12□□□□□ -0.31
PTPRC-206ENST00000413409 MT-ND6P03923 174 aa13.12□□□□□ -0.31
PTPRC-206ENST00000413409 CLEC3BP05452 202 aa13.12□□□□□ -0.31
PTPRC-206ENST00000413409 IER3P46695 156 aa13.12□□□□□ -0.31
PTPRC-206ENST00000413409 C9orf152Q5JTZ5 239 aa13.12□□□□□ -0.31
PTPRC-206ENST00000413409 WDR73Q6P4I2 378 aa13.12□□□□□ -0.31
PTPRC-206ENST00000413409 TMEM183AQ8IXX5 376 aa13.12□□□□□ -0.31
PTPRC-206ENST00000413409 AAMDCQ9H7C9 122 aa13.12□□□□□ -0.31
PTPRC-206ENST00000413409 FBLL1A6NHQ2 334 aaKnown RBP13.11□□□□□ -0.31
PTPRC-206ENST00000413409 IGLV2-11P01706 119 aa13.11□□□□□ -0.31
PTPRC-206ENST00000413409 C1orf194Q5T5A4 169 aa13.11□□□□□ -0.31
PTPRC-206ENST00000413409 CLEC19AQ6UXS0 136 aa13.11□□□□□ -0.31
PTPRC-206ENST00000413409 GOLT1AQ6ZVE7 132 aa13.11□□□□□ -0.31
PTPRC-206ENST00000413409 C11orf44Q8N8P7 122 aa13.11□□□□□ -0.31
PTPRC-206ENST00000413409 NUDT10Q8NFP7 164 aa13.11□□□□□ -0.31
PTPRC-206ENST00000413409 NUDT11Q96G61 164 aa13.11□□□□□ -0.31
PTPRC-206ENST00000413409 USMG5Q96IX5 58 aa13.11□□□□□ -0.31
PTPRC-206ENST00000413409 C19orf71A6NCJ1 209 aa13.1□□□□□ -0.31
PTPRC-206ENST00000413409 IZUMO1RA6ND01 250 aa13.1□□□□□ -0.31
PTPRC-206ENST00000413409 IFITM10A6NMD0 228 aa13.1□□□□□ -0.31
PTPRC-206ENST00000413409 DIRC3C9JPN6 131 aa13.1□□□□□ -0.31
PTPRC-206ENST00000413409 TRGV3P03979 118 aa13.1□□□□□ -0.31
PTPRC-206ENST00000413409 PPIFP30405 207 aaKnown RBP13.1□□□□□ -0.31
PTPRC-206ENST00000413409 RASL11AQ6T310 242 aa13.1□□□□□ -0.31
PTPRC-206ENST00000413409 OR5R1Q8NH85 324 aa13.1□□□□□ -0.31
PTPRC-206ENST00000413409 C17orf77Q96MU5 243 aa13.1□□□□□ -0.31
PTPRC-206ENST00000413409 MS4A10Q96PG2 267 aa13.1□□□□□ -0.31
PTPRC-206ENST00000413409 GNB1LQ9BYB4 327 aa13.1□□□□□ -0.31
PTPRC-206ENST00000413409 GNB4Q9HAV0 340 aa13.1□□□□□ -0.31
PTPRC-206ENST00000413409 SERTAD4Q9NUC0 356 aa13.1□□□□□ -0.31
PTPRC-206ENST00000413409 ZFP30Q9Y2G7 519 aa13.1□□□□□ -0.31
PTPRC-206ENST00000413409 XKRY2A2RUG3 117 aa13.09□□□□□ -0.31
PTPRC-206ENST00000413409 S100A2P29034 98 aa13.09□□□□□ -0.31
PTPRC-206ENST00000413409 CSN1S1P47710 185 aa13.09□□□□□ -0.31
PTPRC-206ENST00000413409 PSG3Q16557 428 aa13.09□□□□□ -0.31
PTPRC-206ENST00000413409 OR4B1Q8NGF8 309 aa13.09□□□□□ -0.31
PTPRC-206ENST00000413409 TSKUQ8WUA8 353 aa13.09□□□□□ -0.31
PTPRC-206ENST00000413409 C12orf57Q99622 126 aa13.09□□□□□ -0.31
PTPRC-206ENST00000413409 PRSS22Q9GZN4 317 aa13.09□□□□□ -0.31
PTPRC-206ENST00000413409 RPP21Q9H633 154 aaKnown RBP13.09□□□□□ -0.31
PTPRC-206ENST00000413409 NPIPB6E9PJ23 425 aa13.08□□□□□ -0.32
PTPRC-206ENST00000413409 TPPP2P59282 170 aa13.08□□□□□ -0.32
PTPRC-206ENST00000413409 CFHR3Q02985 330 aa13.08□□□□□ -0.32
PTPRC-206ENST00000413409 PRR27Q6MZM9 219 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms