RNA–Protein interactions for RNA: ENST00000410513.1

RN7SKP56-201, Transcript of RNA, 7SK small nuclear pseudogene 56, humanhuman

BASIC

Gene RN7SKP56, Length 331 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP56-201ENST00000410513 TIMM8BQ9Y5J9 83 aaPredicted RBP3.23□□□□□ -1.89
RN7SKP56-201ENST00000410513 CDH23Q9H251 3354 aa3.23□□□□□ -1.89
RN7SKP56-201ENST00000410513 PRRC2BQ5JSZ5 2229 aaKnown RBP3.23□□□□□ -1.89
RN7SKP56-201ENST00000410513 CPAMD8Q8IZJ3 1885 aa3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 TRAV26-1A0A087WT03 109 aa3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 TCRBV4S1A1TA0A5B7 111 aa3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 C5orf63A6NC05 138 aa3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 IQCF6A8MYZ5 107 aa3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 GGTLC3B5MD39 225 aa3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 PRSS46E5RG02 174 aa3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 E9PLD3 99 aa3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 M0QXV9 152 aa3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 SS18L1O75177 396 aaPredicted RBP3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 TSPAN13O95857 204 aa3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 LTAP01374 205 aa3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 IGLV2-8P01709 118 aa3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 IGKCP01834 107 aa3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 IGHV4-34P06331 123 aa3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 CRYGCP07315 174 aa3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 SCGB1C2P0DMR2 95 aa3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 EVI2AP22794 236 aa3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 GATA2P23769 480 aaPredicted RBP3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 CKS2P33552 79 aa3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 C2orf91Q6ZV80 131 aa3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 ASCL5Q7RTU5 278 aa3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 Q8N7P7 452 aa3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 TMEM178AQ8NBL3 297 aa3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 PRELID3AQ96N28 172 aa3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 CITED2Q99967 270 aaPredicted RBP3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 SLC25A39Q9BZJ4 359 aaPredicted RBP3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 SPANXB1Q9NS25 103 aaPredicted RBP3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 ZNF835Q9Y2P0 537 aa3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 CHD7Q9P2D1 2997 aa3.22□□□□□ -1.89
RN7SKP56-201ENST00000410513 VCANP13611 3396 aa3.21□□□□□ -1.89
RN7SKP56-201ENST00000410513 CACNA1CQ13936 2221 aa3.21□□□□□ -1.89
RN7SKP56-201ENST00000410513 A8MWV9 139 aa3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 K7EMI3 77 aa3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 UPK2O00526 184 aa3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 TIMM8AO60220 97 aaPredicted RBP3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 PPP1R17O96001 155 aa3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 CSN3P07498 182 aa3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 ZNF688P0C7X2 276 aa3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 ACP1P24666 158 aa3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 PRDX2P32119 198 aa3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 MPV17P39210 176 aa3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 RPL13AP40429 203 aaKnown RBP3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 HERVK_113P61574 105 aa3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 CACNG7P62955 275 aa3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 MRPL23Q16540 153 aaKnown RBP3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 DEFB133Q30KQ1 61 aa3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 SPINK9Q5DT21 86 aa3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 SPATA31B1PQ5VZV4 182 aa3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 ACP7Q6ZNF0 438 aa3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 C16orf47Q6ZP98 133 aaPredicted RBP3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 ZNF493Q6ZR52 646 aa3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 LINC00305Q7Z4B0 112 aa3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 ZCCHC24Q8N2G6 241 aaKnown RBP3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 TMEM105Q8N8V8 129 aa3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 TMEM75Q8N9X5 138 aa3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 LINC00479Q96M42 142 aa3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 FAM173AQ9BQD7 235 aa3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 CHAC1Q9BUX1 264 aa3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 SRXN1Q9BYN0 137 aa3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 KRTAP4-4Q9BYR3 166 aa3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 NHP2Q9NX24 153 aaKnown RBP3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 TMEM14CQ9P0S9 112 aa3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 MYOFQ9NZM1 2061 aa3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 XIRP2A4UGR9 3374 aa3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 COL5A1P20908 1838 aaPredicted RBP3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 ADAMTS9Q9P2N4 1935 aa3.21□□□□□ -1.9
RN7SKP56-201ENST00000410513 CHD3Q12873 2000 aaKnown RBP3.2□□□□□ -1.9
RN7SKP56-201ENST00000410513 IGHV1-45A0A0A0MS14 117 aa3.2□□□□□ -1.9
RN7SKP56-201ENST00000410513 C19orf71A6NCJ1 209 aa3.2□□□□□ -1.9
RN7SKP56-201ENST00000410513 IGLL5B9A064 214 aa3.2□□□□□ -1.9
RN7SKP56-201ENST00000410513 TCRAP04437 139 aa3.2□□□□□ -1.9
RN7SKP56-201ENST00000410513 IFITM1P13164 125 aa3.2□□□□□ -1.9
RN7SKP56-201ENST00000410513 FCER1GP30273 86 aa3.2□□□□□ -1.9
RN7SKP56-201ENST00000410513 ZNF137PP52743 207 aa3.2□□□□□ -1.9
RN7SKP56-201ENST00000410513 MEF2CQ06413 473 aaPredicted RBP3.2□□□□□ -1.9
RN7SKP56-201ENST00000410513 HES1Q14469 280 aa3.2□□□□□ -1.9
RN7SKP56-201ENST00000410513 RRN3P1Q2M238 152 aa3.2□□□□□ -1.9
RN7SKP56-201ENST00000410513 VMA21Q3ZAQ7 101 aa3.2□□□□□ -1.9
RN7SKP56-201ENST00000410513 FAM120AOSQ5T036 256 aa3.2□□□□□ -1.9
RN7SKP56-201ENST00000410513 FAM104BQ5XKR9 115 aa3.2□□□□□ -1.9
RN7SKP56-201ENST00000410513 Q6Q795 121 aa3.2□□□□□ -1.9
RN7SKP56-201ENST00000410513 MOB3BQ86TA1 216 aa3.2□□□□□ -1.9
RN7SKP56-201ENST00000410513 YRDCQ86U90 279 aaKnown RBP3.2□□□□□ -1.9
RN7SKP56-201ENST00000410513 TEN1Q86WV5 123 aa3.2□□□□□ -1.9
RN7SKP56-201ENST00000410513 UBALD2Q8IYN6 164 aa3.2□□□□□ -1.9
RN7SKP56-201ENST00000410513 THAP8Q8NA92 274 aa3.2□□□□□ -1.9
RN7SKP56-201ENST00000410513 OR11H6Q8NGC7 330 aa3.2□□□□□ -1.9
RN7SKP56-201ENST00000410513 OR4C13Q8NGP0 309 aa3.2□□□□□ -1.9
RN7SKP56-201ENST00000410513 OR10J6PQ8NGY7 276 aa3.2□□□□□ -1.9
RN7SKP56-201ENST00000410513 CT55Q8WUE5 264 aa3.2□□□□□ -1.9
RN7SKP56-201ENST00000410513 SRSF12Q8WXF0 261 aaKnown RBP3.2□□□□□ -1.9
RN7SKP56-201ENST00000410513 FLYWCH2Q96CP2 140 aaKnown RBP3.2□□□□□ -1.9
RN7SKP56-201ENST00000410513 TRGV9Q99603 122 aa3.2□□□□□ -1.9
RN7SKP56-201ENST00000410513 SPXQ9BT56 116 aa3.2□□□□□ -1.9
RN7SKP56-201ENST00000410513 PLA2G2FQ9BZM2 168 aa3.2□□□□□ -1.9
RN7SKP56-201ENST00000410513 HIGD1AQ9Y241 93 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms