RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 TMEM136Q6ZRR5 245 aa5.79□□□□□ -1.48
CXCR4-202ENST00000409817 C9orf139Q6ZV77 190 aa5.79□□□□□ -1.48
CXCR4-202ENST00000409817 COX8CQ7Z4L0 72 aa5.79□□□□□ -1.48
CXCR4-202ENST00000409817 PRNTQ86SH4 94 aa5.79□□□□□ -1.48
CXCR4-202ENST00000409817 CIARTQ8N365 385 aaPredicted RBP5.79□□□□□ -1.48
CXCR4-202ENST00000409817 GBGT1Q8N5D6 347 aa5.79□□□□□ -1.48
CXCR4-202ENST00000409817 NUP35Q8NFH5 326 aa5.79□□□□□ -1.48
CXCR4-202ENST00000409817 OR10D4PQ8NGN7 298 aa5.79□□□□□ -1.48
CXCR4-202ENST00000409817 NRGNQ92686 78 aa5.79□□□□□ -1.48
CXCR4-202ENST00000409817 PACRGQ96M98 296 aaPredicted RBP5.79□□□□□ -1.48
CXCR4-202ENST00000409817 C17orf77Q96MU5 243 aa5.79□□□□□ -1.48
CXCR4-202ENST00000409817 GNB4Q9HAV0 340 aa5.79□□□□□ -1.48
CXCR4-202ENST00000409817 PSG8Q9UQ74 426 aa5.79□□□□□ -1.48
CXCR4-202ENST00000409817 SPG11Q96JI7 2443 aa5.78□□□□□ -1.48
CXCR4-202ENST00000409817 ZNF462Q96JM2 2506 aa5.78□□□□□ -1.48
CXCR4-202ENST00000409817 TMEM89A2RUT3 159 aa5.78□□□□□ -1.48
CXCR4-202ENST00000409817 SH2D7A6NKC9 451 aaPredicted RBP5.78□□□□□ -1.48
CXCR4-202ENST00000409817 HIGD1CA8MV81 97 aa5.78□□□□□ -1.48
CXCR4-202ENST00000409817 NDUFA4O00483 81 aa5.78□□□□□ -1.48
CXCR4-202ENST00000409817 TGFAP01135 160 aa5.78□□□□□ -1.48
CXCR4-202ENST00000409817 CT45A10P0DMU9 189 aa5.78□□□□□ -1.48
CXCR4-202ENST00000409817 ESDP10768 282 aa5.78□□□□□ -1.48
CXCR4-202ENST00000409817 FABP4P15090 132 aa5.78□□□□□ -1.48
CXCR4-202ENST00000409817 FOXA3P55318 350 aaPredicted RBP5.78□□□□□ -1.48
CXCR4-202ENST00000409817 TCL1AP56279 114 aa5.78□□□□□ -1.48
CXCR4-202ENST00000409817 LY6EQ16553 131 aa5.78□□□□□ -1.48
CXCR4-202ENST00000409817 OR10J3Q5JRS4 329 aa5.78□□□□□ -1.48
CXCR4-202ENST00000409817 Q6AWC8 147 aa5.78□□□□□ -1.48
CXCR4-202ENST00000409817 C16orf54Q6UWD8 224 aa5.78□□□□□ -1.48
CXCR4-202ENST00000409817 MRPL53Q96EL3 112 aaKnown RBP5.78□□□□□ -1.48
CXCR4-202ENST00000409817 MS4A10Q96PG2 267 aa5.78□□□□□ -1.48
CXCR4-202ENST00000409817 NEU1Q99519 415 aa5.78□□□□□ -1.48
CXCR4-202ENST00000409817 MYO18BQ8IUG5 2567 aa5.78□□□□□ -1.48
CXCR4-202ENST00000409817 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.77□□□□□ -1.49
CXCR4-202ENST00000409817 CLPSL1A2RUU4 121 aa5.77□□□□□ -1.49
CXCR4-202ENST00000409817 RBAKDNA6NC62 111 aa5.77□□□□□ -1.49
CXCR4-202ENST00000409817 FSHBP01225 129 aa5.77□□□□□ -1.49
CXCR4-202ENST00000409817 AMBPP02760 352 aa5.77□□□□□ -1.49
CXCR4-202ENST00000409817 TPPP2P59282 170 aa5.77□□□□□ -1.49
CXCR4-202ENST00000409817 RBPMS2Q6ZRY4 209 aaKnown RBP5.77□□□□□ -1.49
CXCR4-202ENST00000409817 TEX29Q8N6K0 151 aa5.77□□□□□ -1.49
CXCR4-202ENST00000409817 SGK494Q96LW2 274 aa5.77□□□□□ -1.49
CXCR4-202ENST00000409817 NIT2Q9NQR4 276 aa5.77□□□□□ -1.49
CXCR4-202ENST00000409817 TRAV8-1A0A0A6YYK1 113 aa5.77□□□□□ -1.49
CXCR4-202ENST00000409817 A0A1B0GW15 77 aa5.77□□□□□ -1.49
CXCR4-202ENST00000409817 A0A1B0GXF2 115 aa5.77□□□□□ -1.49
CXCR4-202ENST00000409817 ZNF785A8K8V0 405 aa5.77□□□□□ -1.49
CXCR4-202ENST00000409817 CA1P00915 261 aaPredicted RBP5.77□□□□□ -1.49
CXCR4-202ENST00000409817 APCSP02743 223 aa5.77□□□□□ -1.49
CXCR4-202ENST00000409817 ARL3P36405 182 aa5.77□□□□□ -1.49
CXCR4-202ENST00000409817 RAB4BP61018 213 aa5.77□□□□□ -1.49
CXCR4-202ENST00000409817 PAFAH1B2P68402 229 aa5.77□□□□□ -1.49
CXCR4-202ENST00000409817 HBBP68871 147 aa5.77□□□□□ -1.49
CXCR4-202ENST00000409817 PDZD11Q5EBL8 140 aa5.77□□□□□ -1.49
CXCR4-202ENST00000409817 PYY3Q5JQD4 70 aa5.77□□□□□ -1.49
CXCR4-202ENST00000409817 MRPL54Q6P161 138 aaKnown RBP5.77□□□□□ -1.49
CXCR4-202ENST00000409817 Q8N3U1 123 aa5.77□□□□□ -1.49
CXCR4-202ENST00000409817 NDFIP1Q9BT67 221 aa5.77□□□□□ -1.49
CXCR4-202ENST00000409817 SMAD5-AS1Q9Y6J3 95 aa5.77□□□□□ -1.49
CXCR4-202ENST00000409817 FAM208BQ5VWN6 2430 aa5.76□□□□□ -1.49
CXCR4-202ENST00000409817 A0A1W2PS18 150 aa5.76□□□□□ -1.49
CXCR4-202ENST00000409817 M0R3E3 92 aa5.76□□□□□ -1.49
CXCR4-202ENST00000409817 CHEK1O14757 476 aa5.76□□□□□ -1.49
CXCR4-202ENST00000409817 IGHV4-31P0DP07 118 aa5.76□□□□□ -1.49
CXCR4-202ENST00000409817 CFHR3Q02985 330 aa5.76□□□□□ -1.49
CXCR4-202ENST00000409817 DEFB112Q30KQ8 113 aa5.76□□□□□ -1.49
CXCR4-202ENST00000409817 Q5PR19 223 aa5.76□□□□□ -1.49
CXCR4-202ENST00000409817 LINC00322Q6ZN03 302 aaPredicted RBP5.76□□□□□ -1.49
CXCR4-202ENST00000409817 OR2D3Q8NGH3 330 aa5.76□□□□□ -1.49
CXCR4-202ENST00000409817 A8MWP6 167 aa5.75□□□□□ -1.49
CXCR4-202ENST00000409817 HOXA3O43365 443 aaPredicted RBP5.75□□□□□ -1.49
CXCR4-202ENST00000409817 SPINK4O60575 86 aa5.75□□□□□ -1.49
CXCR4-202ENST00000409817 BMI1P35226 326 aa5.75□□□□□ -1.49
CXCR4-202ENST00000409817 RPS20P60866 119 aaKnown RBP5.75□□□□□ -1.49
CXCR4-202ENST00000409817 BLCAPP62952 87 aa5.75□□□□□ -1.49
CXCR4-202ENST00000409817 SLC35B1P78383 322 aa5.75□□□□□ -1.49
CXCR4-202ENST00000409817 JOSD1Q15040 202 aaPredicted RBP5.75□□□□□ -1.49
CXCR4-202ENST00000409817 FAM162BQ5T6X4 162 aa5.75□□□□□ -1.49
CXCR4-202ENST00000409817 LCN12Q6JVE5 192 aa5.75□□□□□ -1.49
CXCR4-202ENST00000409817 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.75□□□□□ -1.49
CXCR4-202ENST00000409817 BAGE3Q86Y29 109 aa5.75□□□□□ -1.49
CXCR4-202ENST00000409817 ZC2HC1AQ96GY0 325 aa5.75□□□□□ -1.49
CXCR4-202ENST00000409817 PRDM13Q9H4Q3 707 aa5.75□□□□□ -1.49
CXCR4-202ENST00000409817 ZFYVE26Q68DK2 2539 aa5.75□□□□□ -1.49
CXCR4-202ENST00000409817 IGHV3-35A0A0C4DH35 117 aa5.75□□□□□ -1.49
CXCR4-202ENST00000409817 IGHG4P01861 327 aa5.75□□□□□ -1.49
CXCR4-202ENST00000409817 SAMD13Q5VXD3 122 aa5.75□□□□□ -1.49
CXCR4-202ENST00000409817 CYB5R2Q6BCY4 276 aa5.75□□□□□ -1.49
CXCR4-202ENST00000409817 Q6YL49 198 aa5.75□□□□□ -1.49
CXCR4-202ENST00000409817 GTSF1Q8WW33 167 aa5.75□□□□□ -1.49
CXCR4-202ENST00000409817 NOL4LQ96MY1 436 aaPredicted RBP5.75□□□□□ -1.49
CXCR4-202ENST00000409817 PRR25Q96S07 402 aa5.75□□□□□ -1.49
CXCR4-202ENST00000409817 PPP1R14DQ9NXH3 145 aa5.75□□□□□ -1.49
CXCR4-202ENST00000409817 LINC00527Q9UJ94 153 aa5.75□□□□□ -1.49
CXCR4-202ENST00000409817 VPREB3Q9UKI3 123 aa5.75□□□□□ -1.49
CXCR4-202ENST00000409817 PRRC2AP48634 2157 aaKnown RBP5.74□□□□□ -1.49
CXCR4-202ENST00000409817 FLNCQ14315 2725 aa5.74□□□□□ -1.49
CXCR4-202ENST00000409817 A0A087WWL8 130 aa5.74□□□□□ -1.49
CXCR4-202ENST00000409817 IGHV4-59P01825 116 aa5.74□□□□□ -1.49
CXCR4-202ENST00000409817 FRMD6-AS1P0C7T7 363 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms