RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 SMIM9A6NGZ8 99 aa7.92□□□□□ -1.14
CHMP3-205ENST00000409810 ZNF705FA8MVS1 300 aaPredicted RBP7.92□□□□□ -1.14
CHMP3-205ENST00000409810 ZNF705DP0CH99 300 aaPredicted RBP7.92□□□□□ -1.14
CHMP3-205ENST00000409810 ZNF705BP0CI00 300 aaPredicted RBP7.92□□□□□ -1.14
CHMP3-205ENST00000409810 TSPOP30536 169 aa7.92□□□□□ -1.14
CHMP3-205ENST00000409810 RAB2AP61019 212 aa7.92□□□□□ -1.14
CHMP3-205ENST00000409810 SPINK13Q1W4C9 94 aa7.92□□□□□ -1.14
CHMP3-205ENST00000409810 CASC10Q5T4H9 136 aa7.92□□□□□ -1.14
CHMP3-205ENST00000409810 RPL7L1Q6DKI1 246 aaKnown RBP7.92□□□□□ -1.14
CHMP3-205ENST00000409810 AMTNQ6UX39 209 aa7.92□□□□□ -1.14
CHMP3-205ENST00000409810 ZNF705AQ6ZN79 300 aaPredicted RBP7.92□□□□□ -1.14
CHMP3-205ENST00000409810 LYPD1Q8N2G4 141 aa7.92□□□□□ -1.14
CHMP3-205ENST00000409810 FXYD5Q96DB9 178 aa7.92□□□□□ -1.14
CHMP3-205ENST00000409810 IGF2BP2-AS1Q96M15 143 aa7.92□□□□□ -1.14
CHMP3-205ENST00000409810 NEU1Q99519 415 aa7.92□□□□□ -1.14
CHMP3-205ENST00000409810 ARPC5LQ9BPX5 153 aa7.92□□□□□ -1.14
CHMP3-205ENST00000409810 IGHV3OR16-12A0A075B7B8 117 aa7.91□□□□□ -1.14
CHMP3-205ENST00000409810 IGHV4-28A0A0C4DH34 117 aa7.91□□□□□ -1.14
CHMP3-205ENST00000409810 A0A0D9SG52 128 aa7.91□□□□□ -1.14
CHMP3-205ENST00000409810 NDUFB4O95168 129 aa7.91□□□□□ -1.14
CHMP3-205ENST00000409810 CDKN1BP46527 198 aa7.91□□□□□ -1.14
CHMP3-205ENST00000409810 CSN1S1P47710 185 aa7.91□□□□□ -1.14
CHMP3-205ENST00000409810 ICAM4Q14773 271 aa7.91□□□□□ -1.14
CHMP3-205ENST00000409810 FAM74A1Q5RGS3 127 aa7.91□□□□□ -1.14
CHMP3-205ENST00000409810 ZFAND6Q6FIF0 208 aa7.91□□□□□ -1.14
CHMP3-205ENST00000409810 Q6ZNX1 250 aa7.91□□□□□ -1.14
CHMP3-205ENST00000409810 Q8NAQ8 132 aa7.91□□□□□ -1.14
CHMP3-205ENST00000409810 ODF3Q96PU9 254 aa7.91□□□□□ -1.14
CHMP3-205ENST00000409810 TMEM208Q9BTX3 173 aa7.91□□□□□ -1.14
CHMP3-205ENST00000409810 SH3BGRL3Q9H299 93 aa7.91□□□□□ -1.14
CHMP3-205ENST00000409810 RFNGQ9Y644 331 aa7.91□□□□□ -1.14
CHMP3-205ENST00000409810 X6R8D5 127 aa7.91□□□□□ -1.14
CHMP3-205ENST00000409810 KANTRA0A1W2PQU2 76 aa7.9□□□□□ -1.14
CHMP3-205ENST00000409810 TMEM189A5PLL7 270 aa7.9□□□□□ -1.14
CHMP3-205ENST00000409810 M0R2Z0 102 aa7.9□□□□□ -1.14
CHMP3-205ENST00000409810 HBE1P02100 147 aa7.9□□□□□ -1.14
CHMP3-205ENST00000409810 LEPP41159 167 aa7.9□□□□□ -1.14
CHMP3-205ENST00000409810 EIF5AP63241 154 aaKnown RBP7.9□□□□□ -1.14
CHMP3-205ENST00000409810 AKR1C8PQ5T2L2 129 aa7.9□□□□□ -1.14
CHMP3-205ENST00000409810 TMEM256Q8N2U0 113 aa7.9□□□□□ -1.14
CHMP3-205ENST00000409810 EXOC3-AS1Q8N2X6 119 aa7.9□□□□□ -1.14
CHMP3-205ENST00000409810 KCNRGQ8N5I3 272 aa7.9□□□□□ -1.14
CHMP3-205ENST00000409810 C11orf45Q8TAV5 145 aa7.9□□□□□ -1.14
CHMP3-205ENST00000409810 ZNF503Q96F45 646 aa7.9□□□□□ -1.14
CHMP3-205ENST00000409810 PHYHIPLQ96FC7 376 aa7.9□□□□□ -1.14
CHMP3-205ENST00000409810 ACTR3CQ9C0K3 210 aaPredicted RBP7.9□□□□□ -1.14
CHMP3-205ENST00000409810 Q9H3A6 140 aa7.9□□□□□ -1.14
CHMP3-205ENST00000409810 CXorf65A6NEN9 183 aa7.89□□□□□ -1.15
CHMP3-205ENST00000409810 NUPR2A6NF83 97 aa7.89□□□□□ -1.15
CHMP3-205ENST00000409810 PRAC2D3DTV9 90 aa7.89□□□□□ -1.15
CHMP3-205ENST00000409810 NPIPB6E9PJ23 425 aa7.89□□□□□ -1.15
CHMP3-205ENST00000409810 M0R3E3 92 aa7.89□□□□□ -1.15
CHMP3-205ENST00000409810 DEFB4AO15263 64 aa7.89□□□□□ -1.15
CHMP3-205ENST00000409810 STAG3L2P0CL84 134 aa7.89□□□□□ -1.15
CHMP3-205ENST00000409810 STAG3L3P0CL85 134 aa7.89□□□□□ -1.15
CHMP3-205ENST00000409810 ARL14EPLP0DKL9 152 aa7.89□□□□□ -1.15
CHMP3-205ENST00000409810 RANP62826 216 aaKnown RBP7.89□□□□□ -1.15
CHMP3-205ENST00000409810 PMS2P11Q13670 270 aa7.89□□□□□ -1.15
CHMP3-205ENST00000409810 RRN3P1Q2M238 152 aa7.89□□□□□ -1.15
CHMP3-205ENST00000409810 BAP18Q8IXM2 172 aa7.89□□□□□ -1.15
CHMP3-205ENST00000409810 TCTE3Q8IZS6 198 aa7.89□□□□□ -1.15
CHMP3-205ENST00000409810 RPP25LQ8N5L8 163 aaKnown RBP7.89□□□□□ -1.15
CHMP3-205ENST00000409810 CMTM2Q8TAZ6 248 aa7.89□□□□□ -1.15
CHMP3-205ENST00000409810 RXFP4Q8TDU9 374 aa7.89□□□□□ -1.15
CHMP3-205ENST00000409810 LINC00477Q96M19 166 aa7.89□□□□□ -1.15
CHMP3-205ENST00000409810 C20orf144Q9BQM9 153 aa7.89□□□□□ -1.15
CHMP3-205ENST00000409810 STARD9Q9P2P6 4700 aa7.88□□□□□ -1.15
CHMP3-205ENST00000409810 TEX48A0A1B0GUV7 120 aa7.88□□□□□ -1.15
CHMP3-205ENST00000409810 RBAKDNA6NC62 111 aa7.88□□□□□ -1.15
CHMP3-205ENST00000409810 HMGB3O15347 200 aaKnown RBP7.88□□□□□ -1.15
CHMP3-205ENST00000409810 BCL2L11O43521 198 aa7.88□□□□□ -1.15
CHMP3-205ENST00000409810 PFDN1O60925 122 aa7.88□□□□□ -1.15
CHMP3-205ENST00000409810 CXorf1O96002 111 aa7.88□□□□□ -1.15
CHMP3-205ENST00000409810 RBMY1A1P0DJD3 496 aaKnown RBP7.88□□□□□ -1.15
CHMP3-205ENST00000409810 RBMY1CP0DJD4 496 aa7.88□□□□□ -1.15
CHMP3-205ENST00000409810 PRB4P10163 310 aaPredicted RBP7.88□□□□□ -1.15
CHMP3-205ENST00000409810 RBMY1FQ15415 496 aaKnown RBP7.88□□□□□ -1.15
CHMP3-205ENST00000409810 TMEM78Q5T7P6 136 aa7.88□□□□□ -1.15
CHMP3-205ENST00000409810 C1orf158Q8N1D5 194 aa7.88□□□□□ -1.15
CHMP3-205ENST00000409810 OR11H4Q8NGC9 324 aa7.88□□□□□ -1.15
CHMP3-205ENST00000409810 RAB24Q969Q5 203 aa7.88□□□□□ -1.15
CHMP3-205ENST00000409810 ST6GAL2Q96JF0 529 aa7.88□□□□□ -1.15
CHMP3-205ENST00000409810 OTORQ9NRC9 128 aa7.88□□□□□ -1.15
CHMP3-205ENST00000409810 CYTL1Q9NRR1 136 aa7.88□□□□□ -1.15
CHMP3-205ENST00000409810 TMEM167BQ9NRX6 74 aa7.88□□□□□ -1.15
CHMP3-205ENST00000409810 CSMD3Q7Z407 3707 aa7.88□□□□□ -1.15
CHMP3-205ENST00000409810 TRAV12-2A0A075B6T6 113 aa7.87□□□□□ -1.15
CHMP3-205ENST00000409810 CTXND1A0A1B0GTU2 59 aa7.87□□□□□ -1.15
CHMP3-205ENST00000409810 CRXO43186 299 aaPredicted RBP7.87□□□□□ -1.15
CHMP3-205ENST00000409810 EIF3GO75821 320 aaKnown RBP eCLIP7.87□□□□□ -1.15
CHMP3-205ENST00000409810 SLC25A5P05141 298 aaKnown RBP7.87□□□□□ -1.15
CHMP3-205ENST00000409810 C9orf47Q6ZRZ4 202 aa7.87□□□□□ -1.15
CHMP3-205ENST00000409810 AKAP14Q86UN6 197 aa7.87□□□□□ -1.15
CHMP3-205ENST00000409810 ZNF471Q9BX82 626 aaPredicted RBP7.87□□□□□ -1.15
CHMP3-205ENST00000409810 IGKV2-40A0A087WW87 121 aaPredicted RBP7.86□□□□□ -1.15
CHMP3-205ENST00000409810 LOC102723971A0A1B0GUV8 181 aa7.86□□□□□ -1.15
CHMP3-205ENST00000409810 H7BYZ3 331 aa7.86□□□□□ -1.15
CHMP3-205ENST00000409810 IGKV2D-40P01614 121 aaPredicted RBP7.86□□□□□ -1.15
CHMP3-205ENST00000409810 CT45A10P0DMU9 189 aa7.86□□□□□ -1.15
CHMP3-205ENST00000409810 GCHFRP30047 84 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms