RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 KIAA1549Q9HCM3 1950 aa6.82□□□□□ -1.32
SCN9A-203ENST00000409672 C5orf63A6NC05 138 aa6.82□□□□□ -1.32
SCN9A-203ENST00000409672 IGKV1-16P04430 117 aa6.82□□□□□ -1.32
SCN9A-203ENST00000409672 IFI27L1Q96BM0 104 aa6.82□□□□□ -1.32
SCN9A-203ENST00000409672 MGST2Q99735 147 aa6.82□□□□□ -1.32
SCN9A-203ENST00000409672 TNFRSF6BO95407 300 aa6.82□□□□□ -1.32
SCN9A-203ENST00000409672 LMO1P25800 156 aa6.82□□□□□ -1.32
SCN9A-203ENST00000409672 IGHV4-59P01825 116 aa6.82□□□□□ -1.32
SCN9A-203ENST00000409672 TRBV6-7A0A0A0MS04 114 aa6.82□□□□□ -1.32
SCN9A-203ENST00000409672 TEX48A0A1B0GUV7 120 aa6.82□□□□□ -1.32
SCN9A-203ENST00000409672 SPRY2O43597 315 aa6.82□□□□□ -1.32
SCN9A-203ENST00000409672 HIST2H2BCQ6DN03 193 aa6.82□□□□□ -1.32
SCN9A-203ENST00000409672 COX11Q9Y6N1 276 aa6.82□□□□□ -1.32
SCN9A-203ENST00000409672 M0R1W7 72 aa6.82□□□□□ -1.32
SCN9A-203ENST00000409672 C18orf12Q96KH6 178 aa6.82□□□□□ -1.32
SCN9A-203ENST00000409672 MUC4Q99102 2169 aa6.81□□□□□ -1.32
SCN9A-203ENST00000409672 A0A1B0GUS0 222 aa6.81□□□□□ -1.32
SCN9A-203ENST00000409672 hDV102S1A0JD36 115 aa6.81□□□□□ -1.32
SCN9A-203ENST00000409672 IGLL5B9A064 214 aa6.81□□□□□ -1.32
SCN9A-203ENST00000409672 TNRC6AQ8NDV7 1962 aaKnown RBP6.81□□□□□ -1.32
SCN9A-203ENST00000409672 IGLV3-21P80748 117 aaPredicted RBP6.81□□□□□ -1.32
SCN9A-203ENST00000409672 TMEM158Q8WZ71 300 aa6.81□□□□□ -1.32
SCN9A-203ENST00000409672 BUB3O43684 328 aa6.81□□□□□ -1.32
SCN9A-203ENST00000409672 DDTP30046 118 aa6.81□□□□□ -1.32
SCN9A-203ENST00000409672 TIMM21Q9BVV7 248 aa6.81□□□□□ -1.32
SCN9A-203ENST00000409672 HIST2H2BDQ6DRA6 164 aa6.81□□□□□ -1.32
SCN9A-203ENST00000409672 IGKV1D-8A0A087WSZ0 117 aa6.81□□□□□ -1.32
SCN9A-203ENST00000409672 C4orf48Q5BLP8 95 aa6.81□□□□□ -1.32
SCN9A-203ENST00000409672 SMIM2Q9BVW6 85 aa6.81□□□□□ -1.32
SCN9A-203ENST00000409672 IGKV1-9A0A0C4DH69 117 aa6.81□□□□□ -1.32
SCN9A-203ENST00000409672 VCYO14598 125 aa6.81□□□□□ -1.32
SCN9A-203ENST00000409672 MMP23AO75900 390 aa6.81□□□□□ -1.32
SCN9A-203ENST00000409672 TEX36Q5VZQ5 186 aa6.81□□□□□ -1.32
SCN9A-203ENST00000409672 NMBP08949 121 aa6.81□□□□□ -1.32
SCN9A-203ENST00000409672 SLURP1P55000 103 aa6.81□□□□□ -1.32
SCN9A-203ENST00000409672 AMN1Q8IY45 258 aa6.8□□□□□ -1.32
SCN9A-203ENST00000409672 LINC00479Q96M42 142 aa6.8□□□□□ -1.32
SCN9A-203ENST00000409672 KLHDC3Q9BQ90 382 aa6.8□□□□□ -1.32
SCN9A-203ENST00000409672 Q6AWC8 147 aa6.8□□□□□ -1.32
SCN9A-203ENST00000409672 LIME1Q9H400 295 aa6.8□□□□□ -1.32
SCN9A-203ENST00000409672 SMDT1Q9H4I9 107 aa6.8□□□□□ -1.32
SCN9A-203ENST00000409672 C2orf82Q6UX34 121 aa6.8□□□□□ -1.32
SCN9A-203ENST00000409672 SRSF3P84103 164 aaKnown RBP6.8□□□□□ -1.32
SCN9A-203ENST00000409672 DEFB112Q30KQ8 113 aa6.8□□□□□ -1.32
SCN9A-203ENST00000409672 HEPN1Q6WQI6 88 aa6.8□□□□□ -1.32
SCN9A-203ENST00000409672 ANAPC13Q9BS18 74 aa6.8□□□□□ -1.32
SCN9A-203ENST00000409672 MED13LQ71F56 2210 aa6.8□□□□□ -1.32
SCN9A-203ENST00000409672 SUPT4H1P63272 117 aaKnown RBP6.8□□□□□ -1.32
SCN9A-203ENST00000409672 IFITM3Q01628 133 aa6.8□□□□□ -1.32
SCN9A-203ENST00000409672 TMEM242Q9NWH2 141 aa6.8□□□□□ -1.32
SCN9A-203ENST00000409672 WISP3O95389 354 aaPredicted RBP6.8□□□□□ -1.32
SCN9A-203ENST00000409672 ARMS2P0C7Q2 107 aa6.8□□□□□ -1.32
SCN9A-203ENST00000409672 TSSC4Q9Y5U2 329 aaPredicted RBP6.8□□□□□ -1.32
SCN9A-203ENST00000409672 IGKV1-27A0A075B6S5 117 aa6.79□□□□□ -1.32
SCN9A-203ENST00000409672 A0A1B0GTI1 187 aa6.79□□□□□ -1.32
SCN9A-203ENST00000409672 A0A1B0GWJ7 208 aa6.79□□□□□ -1.32
SCN9A-203ENST00000409672 PIFOQ8TCI5 191 aa6.79□□□□□ -1.32
SCN9A-203ENST00000409672 HGFACQ04756 655 aa6.79□□□□□ -1.32
SCN9A-203ENST00000409672 MTURNQ8N3F0 131 aa6.79□□□□□ -1.32
SCN9A-203ENST00000409672 ZNF106Q9H2Y7 1883 aaKnown RBP6.79□□□□□ -1.32
SCN9A-203ENST00000409672 IGKV1D-17A0A075B6S4 117 aa6.79□□□□□ -1.32
SCN9A-203ENST00000409672 IGLV3-19P01714 112 aa6.79□□□□□ -1.32
SCN9A-203ENST00000409672 SRSF2Q01130 221 aaKnown RBP6.79□□□□□ -1.32
SCN9A-203ENST00000409672 NPDC1Q9NQX5 325 aaPredicted RBP6.79□□□□□ -1.32
SCN9A-203ENST00000409672 TET2Q6N021 2002 aaPredicted RBP6.79□□□□□ -1.32
SCN9A-203ENST00000409672 TMEM238C9JI98 176 aa6.79□□□□□ -1.32
SCN9A-203ENST00000409672 A0A087X0K7 114 aa6.79□□□□□ -1.32
SCN9A-203ENST00000409672 CCL20P78556 96 aa6.79□□□□□ -1.32
SCN9A-203ENST00000409672 TNRC6BQ9UPQ9 1833 aaKnown RBP6.79□□□□□ -1.32
SCN9A-203ENST00000409672 IGKV1-12A0A0C4DH73 117 aa6.79□□□□□ -1.32
SCN9A-203ENST00000409672 ATP5IP56385 69 aaPredicted RBP6.79□□□□□ -1.32
SCN9A-203ENST00000409672 HAMPP81172 84 aa6.79□□□□□ -1.32
SCN9A-203ENST00000409672 SPINK8P0C7L1 97 aa6.79□□□□□ -1.32
SCN9A-203ENST00000409672 A0A0G2JMZ2 1700 aa6.79□□□□□ -1.32
SCN9A-203ENST00000409672 LRRC37A2A6NM11 1700 aa6.79□□□□□ -1.32
SCN9A-203ENST00000409672 TINCRA0A1B0GVN0 87 aa6.79□□□□□ -1.32
SCN9A-203ENST00000409672 LINC00473A8K010 186 aa6.79□□□□□ -1.32
SCN9A-203ENST00000409672 FBLIM1Q8WUP2 373 aa6.79□□□□□ -1.32
SCN9A-203ENST00000409672 IGHG3P01860 377 aa6.78□□□□□ -1.32
SCN9A-203ENST00000409672 DEFB113Q30KQ7 82 aa6.78□□□□□ -1.32
SCN9A-203ENST00000409672 C9orf153Q5TBE3 101 aa6.78□□□□□ -1.32
SCN9A-203ENST00000409672 CEP192Q8TEP8 1941 aa6.78□□□□□ -1.32
SCN9A-203ENST00000409672 WISP1O95388 367 aa6.78□□□□□ -1.32
SCN9A-203ENST00000409672 SRP19P09132 144 aaKnown RBP6.78□□□□□ -1.32
SCN9A-203ENST00000409672 SAMD5Q5TGI4 173 aa6.78□□□□□ -1.32
SCN9A-203ENST00000409672 A8MWV9 139 aa6.78□□□□□ -1.32
SCN9A-203ENST00000409672 ARTNQ5T4W7 220 aa6.78□□□□□ -1.32
SCN9A-203ENST00000409672 RMI2Q96E14 147 aa6.78□□□□□ -1.32
SCN9A-203ENST00000409672 TMEM243Q9BU79 118 aa6.78□□□□□ -1.32
SCN9A-203ENST00000409672 IGHV2-70DA0A0C4DH43 119 aa6.78□□□□□ -1.32
SCN9A-203ENST00000409672 SRRM5B3KS81 715 aa6.78□□□□□ -1.32
SCN9A-203ENST00000409672 Q6ZS92 163 aa6.78□□□□□ -1.32
SCN9A-203ENST00000409672 PRSS33Q8NF86 280 aa6.78□□□□□ -1.32
SCN9A-203ENST00000409672 ZNF503Q96F45 646 aa6.78□□□□□ -1.32
SCN9A-203ENST00000409672 NDUFB8O95169 186 aa6.78□□□□□ -1.32
SCN9A-203ENST00000409672 RNF144BQ7Z419 303 aa6.78□□□□□ -1.32
SCN9A-203ENST00000409672 GTSF1Q8WW33 167 aa6.78□□□□□ -1.32
SCN9A-203ENST00000409672 RBM38Q9H0Z9 239 aaKnown RBP6.78□□□□□ -1.32
SCN9A-203ENST00000409672 MORN5Q5VZ52 161 aa6.77□□□□□ -1.33
SCN9A-203ENST00000409672 TNFRSF14Q92956 283 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms