RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 A0A1W2PRE2 83 aa12.27□□□□□ -0.45
SUMO1-208ENST00000409627 ZNF705FA8MVS1 300 aaPredicted RBP12.27□□□□□ -0.45
SUMO1-208ENST00000409627 M0R3E3 92 aa12.27□□□□□ -0.45
SUMO1-208ENST00000409627 HBE1P02100 147 aa12.27□□□□□ -0.45
SUMO1-208ENST00000409627 DEFB1P60022 68 aa12.27□□□□□ -0.45
SUMO1-208ENST00000409627 BLOC1S1P78537 153 aa12.27□□□□□ -0.45
SUMO1-208ENST00000409627 DEFB121Q5J5C9 76 aa12.27□□□□□ -0.45
SUMO1-208ENST00000409627 GDF5OSQ5U4N7 250 aa12.27□□□□□ -0.45
SUMO1-208ENST00000409627 LINC00322Q6ZN03 302 aaPredicted RBP12.27□□□□□ -0.45
SUMO1-208ENST00000409627 TRPT1Q86TN4 253 aaKnown RBP12.27□□□□□ -0.45
SUMO1-208ENST00000409627 STHQ8IWL8 128 aa12.27□□□□□ -0.45
SUMO1-208ENST00000409627 ARL2-SNX15V9GYD0 113 aa12.27□□□□□ -0.45
SUMO1-208ENST00000409627 AGRNO00468 2067 aa12.26□□□□□ -0.45
SUMO1-208ENST00000409627 LOC102724200A0A096LPH7 203 aaPredicted RBP12.26□□□□□ -0.45
SUMO1-208ENST00000409627 RBMY1BA6NDE4 496 aaKnown RBP12.26□□□□□ -0.45
SUMO1-208ENST00000409627 RBMY1EA6NEQ0 496 aaKnown RBP12.26□□□□□ -0.45
SUMO1-208ENST00000409627 F6UB75 175 aa12.26□□□□□ -0.45
SUMO1-208ENST00000409627 H3BMM0 161 aa12.26□□□□□ -0.45
SUMO1-208ENST00000409627 IFNA7P01567 189 aa12.26□□□□□ -0.45
SUMO1-208ENST00000409627 RBMY1DP0C7P1 496 aaKnown RBP12.26□□□□□ -0.45
SUMO1-208ENST00000409627 FRMD6-AS1P0C7T7 363 aa12.26□□□□□ -0.45
SUMO1-208ENST00000409627 ARL6IP6Q8N6S5 226 aa12.26□□□□□ -0.45
SUMO1-208ENST00000409627 ZNF680Q8NEM1 530 aa12.26□□□□□ -0.45
SUMO1-208ENST00000409627 OR8A1Q8NGG7 326 aa12.26□□□□□ -0.45
SUMO1-208ENST00000409627 CLUHP3Q96NS8 147 aa12.26□□□□□ -0.45
SUMO1-208ENST00000409627 MEGF8Q7Z7M0 2845 aa12.25□□□□□ -0.45
SUMO1-208ENST00000409627 A0A1B0GV50 99 aa12.25□□□□□ -0.45
SUMO1-208ENST00000409627 PGPA6NDG6 321 aa12.25□□□□□ -0.45
SUMO1-208ENST00000409627 A8MTW9 85 aa12.25□□□□□ -0.45
SUMO1-208ENST00000409627 DUSP14O95147 198 aaKnown RBP12.25□□□□□ -0.45
SUMO1-208ENST00000409627 CSN1S1P47710 185 aa12.25□□□□□ -0.45
SUMO1-208ENST00000409627 PPT1P50897 306 aa12.25□□□□□ -0.45
SUMO1-208ENST00000409627 RXFP4Q8TDU9 374 aa12.25□□□□□ -0.45
SUMO1-208ENST00000409627 YTHDF2Q9Y5A9 579 aaKnown RBP12.25□□□□□ -0.45
SUMO1-208ENST00000409627 FAM74A7A6NL05 159 aa12.24□□□□□ -0.45
SUMO1-208ENST00000409627 GGTLC3B5MD39 225 aa12.24□□□□□ -0.45
SUMO1-208ENST00000409627 PRAC2D3DTV9 90 aa12.24□□□□□ -0.45
SUMO1-208ENST00000409627 UBE2G2P60604 165 aa12.24□□□□□ -0.45
SUMO1-208ENST00000409627 CMTM2Q8TAZ6 248 aa12.24□□□□□ -0.45
SUMO1-208ENST00000409627 NKX6-2Q9C056 277 aaPredicted RBP12.24□□□□□ -0.45
SUMO1-208ENST00000409627 KIR2DL5BA0A0G2JN68 375 aa12.23□□□□□ -0.45
SUMO1-208ENST00000409627 KIR2DL5BA0A0G2JPC4 375 aa12.23□□□□□ -0.45
SUMO1-208ENST00000409627 RPL35AP18077 110 aaKnown RBP12.23□□□□□ -0.45
SUMO1-208ENST00000409627 CNN1P51911 297 aaKnown RBP12.23□□□□□ -0.45
SUMO1-208ENST00000409627 CCL20P78556 96 aa12.23□□□□□ -0.45
SUMO1-208ENST00000409627 HIST1H1AQ02539 215 aaPredicted RBP12.23□□□□□ -0.45
SUMO1-208ENST00000409627 KIR2DL5AQ8N109 375 aa12.23□□□□□ -0.45
SUMO1-208ENST00000409627 C5orf17Q8NAS9 161 aa12.23□□□□□ -0.45
SUMO1-208ENST00000409627 OR10J6PQ8NGY7 276 aa12.23□□□□□ -0.45
SUMO1-208ENST00000409627 KIR2DL5BQ8NHK3 375 aa12.23□□□□□ -0.45
SUMO1-208ENST00000409627 LYPD6BQ8NI32 183 aa12.23□□□□□ -0.45
SUMO1-208ENST00000409627 FBN3Q75N90 2809 aa12.23□□□□□ -0.45
SUMO1-208ENST00000409627 DIRC3C9JPN6 131 aa12.22□□□□□ -0.45
SUMO1-208ENST00000409627 NPIPB6E9PJ23 425 aa12.22□□□□□ -0.45
SUMO1-208ENST00000409627 SLC25A5P05141 298 aaKnown RBP12.22□□□□□ -0.45
SUMO1-208ENST00000409627 ZNF705DP0CH99 300 aaPredicted RBP12.22□□□□□ -0.45
SUMO1-208ENST00000409627 ZNF705BP0CI00 300 aaPredicted RBP12.22□□□□□ -0.45
SUMO1-208ENST00000409627 APOC4P55056 127 aa12.22□□□□□ -0.45
SUMO1-208ENST00000409627 SUMO1P63165 101 aaKnown RBP12.22□□□□□ -0.45
SUMO1-208ENST00000409627 PMS2P11Q13670 270 aa12.22□□□□□ -0.45
SUMO1-208ENST00000409627 MORN3Q6PF18 240 aaPredicted RBP12.22□□□□□ -0.45
SUMO1-208ENST00000409627 OR4B1Q8NGF8 309 aa12.22□□□□□ -0.45
SUMO1-208ENST00000409627 MANBALQ9NQG1 85 aa12.22□□□□□ -0.45
SUMO1-208ENST00000409627 RBAKDNA6NC62 111 aa12.21□□□□□ -0.45
SUMO1-208ENST00000409627 PAGE4O60829 102 aa12.21□□□□□ -0.45
SUMO1-208ENST00000409627 PRB4P10163 310 aaPredicted RBP12.21□□□□□ -0.45
SUMO1-208ENST00000409627 GNG13Q9P2W3 67 aa12.21□□□□□ -0.45
SUMO1-208ENST00000409627 IGKV2-40A0A087WW87 121 aaPredicted RBP12.2□□□□□ -0.46
SUMO1-208ENST00000409627 SERTM2A0A1B0GWG4 89 aa12.2□□□□□ -0.46
SUMO1-208ENST00000409627 IFNA1P01562 189 aa12.2□□□□□ -0.46
SUMO1-208ENST00000409627 IGKV2D-40P01614 121 aaPredicted RBP12.2□□□□□ -0.46
SUMO1-208ENST00000409627 IGKV3-20P01619 116 aa12.2□□□□□ -0.46
SUMO1-208ENST00000409627 NUTF2P61970 127 aaKnown RBP12.2□□□□□ -0.46
SUMO1-208ENST00000409627 GNG5P63218 68 aa12.2□□□□□ -0.46
SUMO1-208ENST00000409627 HAGHQ16775 308 aa12.2□□□□□ -0.46
SUMO1-208ENST00000409627 CST9LP1Q5W188 147 aa12.2□□□□□ -0.46
SUMO1-208ENST00000409627 AMTNQ6UX39 209 aa12.2□□□□□ -0.46
SUMO1-208ENST00000409627 C9orf47Q6ZRZ4 202 aa12.2□□□□□ -0.46
SUMO1-208ENST00000409627 CCDC28AQ8IWP9 274 aa12.2□□□□□ -0.46
SUMO1-208ENST00000409627 B9D2Q9BPU9 175 aa12.2□□□□□ -0.46
SUMO1-208ENST00000409627 TCEAL7Q9BRU2 100 aa12.2□□□□□ -0.46
SUMO1-208ENST00000409627 CSTL1Q9H114 145 aa12.2□□□□□ -0.46
SUMO1-208ENST00000409627 EPDR1Q9UM22 224 aa12.2□□□□□ -0.46
SUMO1-208ENST00000409627 UBE2CO00762 179 aa12.19□□□□□ -0.46
SUMO1-208ENST00000409627 TCRAP04437 139 aa12.19□□□□□ -0.46
SUMO1-208ENST00000409627 ATP5G3P48201 142 aa12.19□□□□□ -0.46
SUMO1-208ENST00000409627 LINC00477Q96M19 166 aa12.19□□□□□ -0.46
SUMO1-208ENST00000409627 ODF3Q96PU9 254 aa12.19□□□□□ -0.46
SUMO1-208ENST00000409627 RPH3ALQ9UNE2 315 aa12.19□□□□□ -0.46
SUMO1-208ENST00000409627 TAGLN2P37802 199 aaKnown RBP12.18□□□□□ -0.46
SUMO1-208ENST00000409627 IFITM2Q01629 132 aa12.18□□□□□ -0.46
SUMO1-208ENST00000409627 ERCC8Q13216 396 aa12.18□□□□□ -0.46
SUMO1-208ENST00000409627 TMEM78Q5T7P6 136 aa12.18□□□□□ -0.46
SUMO1-208ENST00000409627 GOLT1AQ6ZVE7 132 aa12.18□□□□□ -0.46
SUMO1-208ENST00000409627 ZNF767PQ75MW2 155 aa12.18□□□□□ -0.46
SUMO1-208ENST00000409627 SBSPONQ8IVN8 264 aa12.18□□□□□ -0.46
SUMO1-208ENST00000409627 HIST1H2BAQ96A08 127 aa12.18□□□□□ -0.46
SUMO1-208ENST00000409627 VGLL1Q99990 258 aa12.18□□□□□ -0.46
SUMO1-208ENST00000409627 TXNDC17Q9BRA2 123 aa12.18□□□□□ -0.46
SUMO1-208ENST00000409627 ATG101Q9BSB4 218 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms