RNA–Protein interactions for RNA: ENST00000409532.5

ITGA6-203, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 3,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-203ENST00000409532 CSN1S1P47710 185 aa8.81□□□□□ -1
ITGA6-203ENST00000409532 RELQ04864 619 aaPredicted RBP8.81□□□□□ -1
ITGA6-203ENST00000409532 SELENOKQ9Y6D0 94 aa8.81□□□□□ -1
ITGA6-203ENST00000409532 FAM231BA6NCW3 169 aa8.8□□□□□ -1
ITGA6-203ENST00000409532 CBY3A6NI87 242 aa8.8□□□□□ -1
ITGA6-203ENST00000409532 SLC25A34Q6PIV7 304 aa8.8□□□□□ -1
ITGA6-203ENST00000409532 ZNF738Q8NE65 137 aa8.8□□□□□ -1
ITGA6-203ENST00000409532 MRPS12O15235 138 aaKnown RBP8.8□□□□□ -1
ITGA6-203ENST00000409532 SH2D1AO60880 128 aa8.8□□□□□ -1
ITGA6-203ENST00000409532 HOXB4P17483 251 aaPredicted RBP8.8□□□□□ -1
ITGA6-203ENST00000409532 PPIFP30405 207 aaKnown RBP8.8□□□□□ -1
ITGA6-203ENST00000409532 VAMP3Q15836 100 aa8.8□□□□□ -1
ITGA6-203ENST00000409532 VGLL1Q99990 258 aa8.8□□□□□ -1
ITGA6-203ENST00000409532 COX11Q9Y6N1 276 aa8.8□□□□□ -1
ITGA6-203ENST00000409532 ECSCRQ19T08 205 aa8.8□□□□□ -1
ITGA6-203ENST00000409532 VMO1Q7Z5L0 202 aa8.8□□□□□ -1
ITGA6-203ENST00000409532 RNF5Q99942 180 aa8.8□□□□□ -1
ITGA6-203ENST00000409532 F8W735 103 aaPredicted RBP8.79□□□□□ -1
ITGA6-203ENST00000409532 LY6G5BQ8NDX9 201 aa8.79□□□□□ -1
ITGA6-203ENST00000409532 HSPB8Q9UJY1 196 aa8.79□□□□□ -1
ITGA6-203ENST00000409532 IGLV11-55A0A075B6I3 123 aa8.79□□□□□ -1
ITGA6-203ENST00000409532 WI2-2373I1.2A0A1W2PRP0 233 aa8.79□□□□□ -1
ITGA6-203ENST00000409532 CRXO43186 299 aaPredicted RBP8.79□□□□□ -1
ITGA6-203ENST00000409532 PAX2Q02962 417 aa8.79□□□□□ -1
ITGA6-203ENST00000409532 GPR183P32249 361 aa8.79□□□□□ -1
ITGA6-203ENST00000409532 ZNF80P51504 273 aaPredicted RBP8.79□□□□□ -1
ITGA6-203ENST00000409532 TWIST1Q15672 202 aa8.79□□□□□ -1
ITGA6-203ENST00000409532 OR11H6Q8NGC7 330 aa8.79□□□□□ -1
ITGA6-203ENST00000409532 ST20Q9HBF5 79 aa8.79□□□□□ -1
ITGA6-203ENST00000409532 MSRB1Q9NZV6 116 aa8.79□□□□□ -1
ITGA6-203ENST00000409532 RNF24Q9Y225 148 aa8.79□□□□□ -1
ITGA6-203ENST00000409532 ZNF207O43670 478 aaKnown RBP8.78□□□□□ -1
ITGA6-203ENST00000409532 ORM1P02763 201 aa8.78□□□□□ -1
ITGA6-203ENST00000409532 EGR2P11161 476 aaPredicted RBP8.78□□□□□ -1
ITGA6-203ENST00000409532 TMEM11P17152 192 aa8.78□□□□□ -1
ITGA6-203ENST00000409532 ERCC8Q13216 396 aa8.78□□□□□ -1
ITGA6-203ENST00000409532 PRELID3AQ96N28 172 aa8.78□□□□□ -1
ITGA6-203ENST00000409532 ZFHX3Q15911 3703 aa8.78□□□□□ -1
ITGA6-203ENST00000409532 ZFP36P26651 326 aaKnown RBP8.78□□□□□ -1
ITGA6-203ENST00000409532 ZNF562Q6V9R5 426 aa8.78□□□□□ -1
ITGA6-203ENST00000409532 RNF182Q8N6D2 247 aa8.78□□□□□ -1
ITGA6-203ENST00000409532 ZNF747Q9BV97 191 aa8.78□□□□□ -1
ITGA6-203ENST00000409532 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.78□□□□□ -16e-7■■■■■ 30.1
ITGA6-203ENST00000409532 NDUFA3O95167 84 aa8.77□□□□□ -1
ITGA6-203ENST00000409532 PRTN3P24158 256 aa8.77□□□□□ -1
ITGA6-203ENST00000409532 C16orf54Q6UWD8 224 aa8.77□□□□□ -1
ITGA6-203ENST00000409532 OR10AG1Q8NH19 301 aa8.77□□□□□ -1
ITGA6-203ENST00000409532 SIGLEC8Q9NYZ4 499 aa8.77□□□□□ -1
ITGA6-203ENST00000409532 ADORA2A-AS1P86434 159 aa8.77□□□□□ -1.01
ITGA6-203ENST00000409532 PET117Q6UWS5 81 aa8.77□□□□□ -1.01
ITGA6-203ENST00000409532 NPBQ8NG41 125 aa8.77□□□□□ -1.01
ITGA6-203ENST00000409532 ORAOV1Q8WV07 137 aa8.77□□□□□ -1.01
ITGA6-203ENST00000409532 CTSGP08311 255 aa8.77□□□□□ -1.01
ITGA6-203ENST00000409532 NHLH1Q02575 133 aa8.77□□□□□ -1.01
ITGA6-203ENST00000409532 LYPD1Q8N2G4 141 aa8.77□□□□□ -1.01
ITGA6-203ENST00000409532 C18orf15Q96N68 181 aa8.77□□□□□ -1.01
ITGA6-203ENST00000409532 PRR25Q96S07 402 aa8.77□□□□□ -1.01
ITGA6-203ENST00000409532 RAXQ9Y2V3 346 aa8.77□□□□□ -1.01
ITGA6-203ENST00000409532 TRAV30A0A087WSZ9 112 aa8.76□□□□□ -1.01
ITGA6-203ENST00000409532 NBL1P41271 181 aa8.76□□□□□ -1.01
ITGA6-203ENST00000409532 RNASE8Q8TDE3 154 aaKnown RBP8.76□□□□□ -1.01
ITGA6-203ENST00000409532 PRAC2D3DTV9 90 aa8.76□□□□□ -1.01
ITGA6-203ENST00000409532 GAS8-AS1O95177 125 aa8.76□□□□□ -1.01
ITGA6-203ENST00000409532 RPL7P18124 248 aaKnown RBP8.76□□□□□ -1.01
ITGA6-203ENST00000409532 CKS2P33552 79 aa8.76□□□□□ -1.01
ITGA6-203ENST00000409532 UQCRFS1P47985 274 aa8.76□□□□□ -1.01
ITGA6-203ENST00000409532 MRPL51Q4U2R6 128 aaKnown RBP8.76□□□□□ -1.01
ITGA6-203ENST00000409532 OR4C5Q8NGB2 326 aa8.76□□□□□ -1.01
ITGA6-203ENST00000409532 SRSF8Q9BRL6 282 aaKnown RBP8.76□□□□□ -1.01
ITGA6-203ENST00000409532 SCRT2Q9NQ03 307 aa8.76□□□□□ -1.01
ITGA6-203ENST00000409532 RABAC1Q9UI14 185 aa8.76□□□□□ -1.01
ITGA6-203ENST00000409532 SMAD5-AS1Q9Y6J3 95 aa8.76□□□□□ -1.01
ITGA6-203ENST00000409532 UBE2V1Q13404 147 aa8.76□□□□□ -1.01
ITGA6-203ENST00000409532 BVES-AS1Q5T3Y7 98 aa8.76□□□□□ -1.01
ITGA6-203ENST00000409532 THYN1Q9P016 225 aa8.76□□□□□ -1.01
ITGA6-203ENST00000409532 LINC01548A6NM66 108 aa8.75□□□□□ -1.01
ITGA6-203ENST00000409532 ODF3BA8MYP8 253 aa8.75□□□□□ -1.01
ITGA6-203ENST00000409532 G3V318 75 aa8.75□□□□□ -1.01
ITGA6-203ENST00000409532 NPYP01303 97 aa8.75□□□□□ -1.01
ITGA6-203ENST00000409532 CACNG7P62955 275 aa8.75□□□□□ -1.01
ITGA6-203ENST00000409532 C15orf32Q32M92 178 aa8.75□□□□□ -1.01
ITGA6-203ENST00000409532 FAM104BQ5XKR9 115 aa8.75□□□□□ -1.01
ITGA6-203ENST00000409532 LINC00527Q9UJ94 153 aa8.75□□□□□ -1.01
ITGA6-203ENST00000409532 IGHV3OR16-10A0A075B7F0 116 aa8.75□□□□□ -1.01
ITGA6-203ENST00000409532 A0A096LNJ9 63 aa8.75□□□□□ -1.01
ITGA6-203ENST00000409532 IGHV7-81A0A0B4J1V7 117 aa8.75□□□□□ -1.01
ITGA6-203ENST00000409532 A0A1W2PPR1 153 aa8.75□□□□□ -1.01
ITGA6-203ENST00000409532 CLEC3BP05452 202 aa8.75□□□□□ -1.01
ITGA6-203ENST00000409532 ORMDL3Q8N138 153 aa8.75□□□□□ -1.01
ITGA6-203ENST00000409532 FER1L6-AS1Q8NA97 138 aa8.75□□□□□ -1.01
ITGA6-203ENST00000409532 EVI2AP22794 236 aa8.75□□□□□ -1.01
ITGA6-203ENST00000409532 ANKRD39Q53RE8 183 aa8.75□□□□□ -1.01
ITGA6-203ENST00000409532 LINC01545Q5VT33 79 aa8.75□□□□□ -1.01
ITGA6-203ENST00000409532 RHOGP84095 191 aa8.74□□□□□ -1.01
ITGA6-203ENST00000409532 PSG9Q00887 426 aa8.74□□□□□ -1.01
ITGA6-203ENST00000409532 PDE6HQ13956 83 aa8.74□□□□□ -1.01
ITGA6-203ENST00000409532 CLEC19AQ6UXS0 136 aa8.74□□□□□ -1.01
ITGA6-203ENST00000409532 TTC9CQ8N5M4 171 aa8.74□□□□□ -1.01
ITGA6-203ENST00000409532 NAA38Q9BRA0 125 aaKnown RBP8.74□□□□□ -1.01
ITGA6-203ENST00000409532 TRBV6-1A0A0K0K1D8 114 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms