RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 CXCL13O43927 109 aa8.47□□□□□ -1.05
NIF3L1-204ENST00000409357 NDUFS7O75251 213 aa8.47□□□□□ -1.05
NIF3L1-204ENST00000409357 MRPL33O75394 65 aaKnown RBP8.47□□□□□ -1.05
NIF3L1-204ENST00000409357 ZNF138P52744 262 aa8.47□□□□□ -1.05
NIF3L1-204ENST00000409357 CACNG7P62955 275 aa8.47□□□□□ -1.05
NIF3L1-204ENST00000409357 ATP5G2Q06055 141 aa8.47□□□□□ -1.05
NIF3L1-204ENST00000409357 SHISA2Q6UWI4 295 aa8.47□□□□□ -1.05
NIF3L1-204ENST00000409357 LINC00322Q6ZN03 302 aaPredicted RBP8.47□□□□□ -1.05
NIF3L1-204ENST00000409357 SYT8Q8NBV8 401 aa8.47□□□□□ -1.05
NIF3L1-204ENST00000409357 TMEM158Q8WZ71 300 aa8.47□□□□□ -1.05
NIF3L1-204ENST00000409357 ARPC1AQ92747 370 aa8.47□□□□□ -1.05
NIF3L1-204ENST00000409357 HHLA3Q9XRX5 114 aa8.47□□□□□ -1.05
NIF3L1-204ENST00000409357 FAM90A27PA6NNH2 459 aa8.46□□□□□ -1.05
NIF3L1-204ENST00000409357 COX7A2P2O60397 106 aa8.46□□□□□ -1.05
NIF3L1-204ENST00000409357 CFAP126Q5VTH2 177 aa8.46□□□□□ -1.05
NIF3L1-204ENST00000409357 ZFAND6Q6FIF0 208 aa8.46□□□□□ -1.05
NIF3L1-204ENST00000409357 SEM1Q6ZVN7 128 aa8.46□□□□□ -1.05
NIF3L1-204ENST00000409357 YRDCQ86U90 279 aaKnown RBP8.46□□□□□ -1.05
NIF3L1-204ENST00000409357 SBSPONQ8IVN8 264 aa8.46□□□□□ -1.05
NIF3L1-204ENST00000409357 PPDPFLQ8WWR9 84 aa8.46□□□□□ -1.05
NIF3L1-204ENST00000409357 C20orf78Q9BR46 151 aa8.46□□□□□ -1.05
NIF3L1-204ENST00000409357 ANAPC13Q9BS18 74 aa8.46□□□□□ -1.05
NIF3L1-204ENST00000409357 TRBV25-1A0A075B6N4 114 aa8.46□□□□□ -1.06
NIF3L1-204ENST00000409357 A0A0G2JNJ9 132 aa8.46□□□□□ -1.06
NIF3L1-204ENST00000409357 ZNF785A8K8V0 405 aa8.46□□□□□ -1.06
NIF3L1-204ENST00000409357 NPIPB5A8MRT5 1133 aa8.46□□□□□ -1.06
NIF3L1-204ENST00000409357 UPK2O00526 184 aa8.46□□□□□ -1.06
NIF3L1-204ENST00000409357 SLC25A5P05141 298 aaKnown RBP8.46□□□□□ -1.06
NIF3L1-204ENST00000409357 RNASE2P10153 161 aaKnown RBP8.46□□□□□ -1.06
NIF3L1-204ENST00000409357 OR8A1Q8NGG7 326 aa8.46□□□□□ -1.06
NIF3L1-204ENST00000409357 B4GALT7Q9UBV7 327 aa8.46□□□□□ -1.06
NIF3L1-204ENST00000409357 Q9UFV3 132 aa8.46□□□□□ -1.06
NIF3L1-204ENST00000409357 HIVEP1P15822 2718 aa8.46□□□□□ -1.06
NIF3L1-204ENST00000409357 IQCF6A8MYZ5 107 aa8.45□□□□□ -1.06
NIF3L1-204ENST00000409357 ATP5LO75964 103 aa8.45□□□□□ -1.06
NIF3L1-204ENST00000409357 TCRAP04437 139 aa8.45□□□□□ -1.06
NIF3L1-204ENST00000409357 NMUP48645 174 aa8.45□□□□□ -1.06
NIF3L1-204ENST00000409357 KLF17Q5JT82 389 aaPredicted RBP8.45□□□□□ -1.06
NIF3L1-204ENST00000409357 LYRM7Q5U5X0 104 aa8.45□□□□□ -1.06
NIF3L1-204ENST00000409357 ZNF562Q6V9R5 426 aa8.45□□□□□ -1.06
NIF3L1-204ENST00000409357 MOB3BQ86TA1 216 aa8.45□□□□□ -1.06
NIF3L1-204ENST00000409357 MOGAT3Q86VF5 341 aa8.45□□□□□ -1.06
NIF3L1-204ENST00000409357 OR13A1Q8NGR1 328 aa8.45□□□□□ -1.06
NIF3L1-204ENST00000409357 CITED1Q99966 193 aa8.45□□□□□ -1.06
NIF3L1-204ENST00000409357 NHP2Q9NX24 153 aaKnown RBP8.45□□□□□ -1.06
NIF3L1-204ENST00000409357 ABCA4P78363 2273 aa8.45□□□□□ -1.06
NIF3L1-204ENST00000409357 ZNF469Q96JG9 3925 aaPredicted RBP8.44□□□□□ -1.06
NIF3L1-204ENST00000409357 TRAV5A0A0B4J249 113 aa8.44□□□□□ -1.06
NIF3L1-204ENST00000409357 WI2-2373I1.2A0A1W2PRP0 233 aa8.44□□□□□ -1.06
NIF3L1-204ENST00000409357 PGPA6NDG6 321 aa8.44□□□□□ -1.06
NIF3L1-204ENST00000409357 RHODO00212 210 aa8.44□□□□□ -1.06
NIF3L1-204ENST00000409357 MT-ATP8P03928 68 aa8.44□□□□□ -1.06
NIF3L1-204ENST00000409357 IFI27P40305 119 aaPredicted RBP8.44□□□□□ -1.06
NIF3L1-204ENST00000409357 ASIPP42127 132 aa8.44□□□□□ -1.06
NIF3L1-204ENST00000409357 ZNF137PP52743 207 aa8.44□□□□□ -1.06
NIF3L1-204ENST00000409357 SUB1P53999 127 aaKnown RBP eCLIP8.44□□□□□ -1.06
NIF3L1-204ENST00000409357 XGP55808 180 aa8.44□□□□□ -1.06
NIF3L1-204ENST00000409357 TMEM30BQ3MIR4 351 aa8.44□□□□□ -1.06
NIF3L1-204ENST00000409357 MORN5Q5VZ52 161 aa8.44□□□□□ -1.06
NIF3L1-204ENST00000409357 PATE2Q6UY27 113 aa8.44□□□□□ -1.06
NIF3L1-204ENST00000409357 ORMDL3Q8N138 153 aa8.44□□□□□ -1.06
NIF3L1-204ENST00000409357 FAM234AQ9H0X4 552 aa8.44□□□□□ -1.06
NIF3L1-204ENST00000409357 SS18L2Q9UHA2 77 aa8.44□□□□□ -1.06
NIF3L1-204ENST00000409357 MTORP42345 2549 aa8.44□□□□□ -1.06
NIF3L1-204ENST00000409357 CSN3P07498 182 aa8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 CD24P25063 80 aa8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 LINC00205P59089 165 aa8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 FAM104BQ5XKR9 115 aa8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 Q86TA4 180 aa8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 TEX29Q8N6K0 151 aa8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 DLX4Q92988 240 aaPredicted RBP8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 PRELID3AQ96N28 172 aa8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 OTORQ9NRC9 128 aa8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 CENPVL3A0A0U1RRI6 287 aa8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 GAGE12JA6NER3 117 aa8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 GAGE7O76087 117 aa8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 GAGE12FP0CL80 117 aa8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 GAGE12GP0CL81 117 aa8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 GAGE12IP0CL82 117 aa8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 PYYP10082 97 aa8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 COX6B1P14854 86 aa8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 GATA3P23771 443 aa8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 INSL3P51460 131 aa8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 LOXL3P58215 753 aa8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 KRTAP10-9P60411 292 aa8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 RPL32P62910 135 aaKnown RBP8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 HERV-K104P63124 156 aa8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 GAGE4Q13068 117 aa8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 ODF1Q14990 250 aa8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 TEN1Q86WV5 123 aa8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 ZCCHC24Q8N2G6 241 aaKnown RBP8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 OR10X1Q8NGY0 326 aa8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 LINC01600Q96MT4 127 aa8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 SELENOKQ9Y6D0 94 aa8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 F8P00451 2351 aa8.43□□□□□ -1.06
NIF3L1-204ENST00000409357 ITPR3Q14573 2671 aa8.42□□□□□ -1.06
NIF3L1-204ENST00000409357 TRBV7-3A0A075B6L6 115 aa8.42□□□□□ -1.06
NIF3L1-204ENST00000409357 ZNF503-AS2A6NEH8 195 aa8.42□□□□□ -1.06
NIF3L1-204ENST00000409357 IGKCP01834 107 aa8.42□□□□□ -1.06
NIF3L1-204ENST00000409357 NHLRC4P0CG21 123 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms