RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 Q9H3A6 140 aa10.48□□□□□ -0.73
CHRNA1-204ENST00000409323 C19orf73Q9NVV2 129 aa10.48□□□□□ -0.73
CHRNA1-204ENST00000409323 AURKAIP1Q9NWT8 199 aaPredicted RBP10.48□□□□□ -0.73
CHRNA1-204ENST00000409323 YTHDF2Q9Y5A9 579 aaKnown RBP10.48□□□□□ -0.73
CHRNA1-204ENST00000409323 OR11H12B2RN74 326 aa10.48□□□□□ -0.73
CHRNA1-204ENST00000409323 ISLRO14498 428 aa10.48□□□□□ -0.73
CHRNA1-204ENST00000409323 ID1P41134 155 aa10.48□□□□□ -0.73
CHRNA1-204ENST00000409323 PSMB3P49720 205 aa10.48□□□□□ -0.73
CHRNA1-204ENST00000409323 PEA15Q15121 130 aa10.48□□□□□ -0.73
CHRNA1-204ENST00000409323 TRAV2A0A0B4J234 112 aa10.47□□□□□ -0.73
CHRNA1-204ENST00000409323 RBFOX3A6NFN3 312 aa10.47□□□□□ -0.73
CHRNA1-204ENST00000409323 C9JQL5 133 aa10.47□□□□□ -0.73
CHRNA1-204ENST00000409323 PRAC2D3DTV9 90 aa10.47□□□□□ -0.73
CHRNA1-204ENST00000409323 IGKV3-20P01619 116 aa10.47□□□□□ -0.73
CHRNA1-204ENST00000409323 GNG5P63218 68 aa10.47□□□□□ -0.73
CHRNA1-204ENST00000409323 ZNF506Q5JVG8 444 aa10.47□□□□□ -0.73
CHRNA1-204ENST00000409323 KPRPQ5T749 579 aaPredicted RBP10.47□□□□□ -0.73
CHRNA1-204ENST00000409323 SLC50A1Q9BRV3 221 aa10.47□□□□□ -0.73
CHRNA1-204ENST00000409323 SEC11CQ9BY50 192 aa10.47□□□□□ -0.73
CHRNA1-204ENST00000409323 TMEM167BQ9NRX6 74 aa10.47□□□□□ -0.73
CHRNA1-204ENST00000409323 GNG13Q9P2W3 67 aa10.47□□□□□ -0.73
CHRNA1-204ENST00000409323 PGPA6NDG6 321 aa10.46□□□□□ -0.74
CHRNA1-204ENST00000409323 PAGE4O60829 102 aa10.46□□□□□ -0.74
CHRNA1-204ENST00000409323 TAGLN2P37802 199 aaKnown RBP10.46□□□□□ -0.74
CHRNA1-204ENST00000409323 PSG3Q16557 428 aa10.46□□□□□ -0.74
CHRNA1-204ENST00000409323 ACTL10Q5JWF8 245 aa10.46□□□□□ -0.74
CHRNA1-204ENST00000409323 CST9LP1Q5W188 147 aa10.46□□□□□ -0.74
CHRNA1-204ENST00000409323 AAMDCQ9H7C9 122 aa10.46□□□□□ -0.74
CHRNA1-204ENST00000409323 CARHSP1Q9Y2V2 147 aaKnown RBP10.46□□□□□ -0.74
CHRNA1-204ENST00000409323 NBEAL1Q6ZS30 2694 aa10.46□□□□□ -0.74
CHRNA1-204ENST00000409323 GGTLC3B5MD39 225 aa10.45□□□□□ -0.74
CHRNA1-204ENST00000409323 ATP5G3P48201 142 aa10.45□□□□□ -0.74
CHRNA1-204ENST00000409323 SUMO1P63165 101 aaKnown RBP10.45□□□□□ -0.74
CHRNA1-204ENST00000409323 PSG9Q00887 426 aa10.45□□□□□ -0.74
CHRNA1-204ENST00000409323 PDE6HQ13956 83 aa10.45□□□□□ -0.74
CHRNA1-204ENST00000409323 HAGHQ16775 308 aa10.45□□□□□ -0.74
CHRNA1-204ENST00000409323 SUN5Q8TC36 379 aa10.45□□□□□ -0.74
CHRNA1-204ENST00000409323 RPUSD4Q96CM3 377 aaKnown RBP10.45□□□□□ -0.74
CHRNA1-204ENST00000409323 ASCL2Q99929 193 aa10.45□□□□□ -0.74
CHRNA1-204ENST00000409323 SRD5A3Q9H8P0 318 aa10.45□□□□□ -0.74
CHRNA1-204ENST00000409323 IGKV2-40A0A087WW87 121 aaPredicted RBP10.44□□□□□ -0.74
CHRNA1-204ENST00000409323 FAM74A7A6NL05 159 aa10.44□□□□□ -0.74
CHRNA1-204ENST00000409323 K7EIL1 84 aa10.44□□□□□ -0.74
CHRNA1-204ENST00000409323 IGKV2D-40P01614 121 aaPredicted RBP10.44□□□□□ -0.74
CHRNA1-204ENST00000409323 RPL35AP18077 110 aaKnown RBP10.44□□□□□ -0.74
CHRNA1-204ENST00000409323 RARRES2Q99969 163 aa10.44□□□□□ -0.74
CHRNA1-204ENST00000409323 LOC102723971A0A1B0GUV8 181 aa10.43□□□□□ -0.74
CHRNA1-204ENST00000409323 ZNF253O75346 499 aa10.43□□□□□ -0.74
CHRNA1-204ENST00000409323 SLC25A5P05141 298 aaKnown RBP10.43□□□□□ -0.74
CHRNA1-204ENST00000409323 IGHV4-30-4P0DP06 118 aa10.43□□□□□ -0.74
CHRNA1-204ENST00000409323 BCL2P10415 239 aa10.43□□□□□ -0.74
CHRNA1-204ENST00000409323 ADCYAP1P18509 176 aa10.43□□□□□ -0.74
CHRNA1-204ENST00000409323 PPT1P50897 306 aa10.43□□□□□ -0.74
CHRNA1-204ENST00000409323 HIST1H1AQ02539 215 aaPredicted RBP10.43□□□□□ -0.74
CHRNA1-204ENST00000409323 ERCC8Q13216 396 aa10.43□□□□□ -0.74
CHRNA1-204ENST00000409323 SGK494Q96LW2 274 aa10.43□□□□□ -0.74
CHRNA1-204ENST00000409323 EIF5A2Q9GZV4 153 aaKnown RBP10.43□□□□□ -0.74
CHRNA1-204ENST00000409323 SLC35B3Q9H1N7 401 aa10.43□□□□□ -0.74
CHRNA1-204ENST00000409323 OTORQ9NRC9 128 aa10.43□□□□□ -0.74
CHRNA1-204ENST00000409323 DEFB121Q5J5C9 76 aa10.43□□□□□ -0.74
CHRNA1-204ENST00000409323 OR4B1Q8NGF8 309 aa10.43□□□□□ -0.74
CHRNA1-204ENST00000409323 TUBA4BQ9H853 241 aa10.43□□□□□ -0.74
CHRNA1-204ENST00000409323 TREM1Q9NP99 234 aa10.43□□□□□ -0.74
CHRNA1-204ENST00000409323 SRP19P09132 144 aaKnown RBP10.42□□□□□ -0.74
CHRNA1-204ENST00000409323 FXYD7P58549 80 aa10.42□□□□□ -0.74
CHRNA1-204ENST00000409323 DEFA6Q01524 100 aa10.42□□□□□ -0.74
CHRNA1-204ENST00000409323 SAMD13Q5VXD3 122 aa10.42□□□□□ -0.74
CHRNA1-204ENST00000409323 CMTM2Q8TAZ6 248 aa10.42□□□□□ -0.74
CHRNA1-204ENST00000409323 TXNDC17Q9BRA2 123 aa10.42□□□□□ -0.74
CHRNA1-204ENST00000409323 SAV1Q9H4B6 383 aaPredicted RBP10.42□□□□□ -0.74
CHRNA1-204ENST00000409323 MANBALQ9NQG1 85 aa10.42□□□□□ -0.74
CHRNA1-204ENST00000409323 ZMAT5Q9UDW3 170 aaKnown RBP10.42□□□□□ -0.74
CHRNA1-204ENST00000409323 VAX2Q9UIW0 290 aa10.42□□□□□ -0.74
CHRNA1-204ENST00000409323 A0A1W2PRE2 83 aa10.41□□□□□ -0.74
CHRNA1-204ENST00000409323 RBMY1BA6NDE4 496 aaKnown RBP10.41□□□□□ -0.74
CHRNA1-204ENST00000409323 RBMY1EA6NEQ0 496 aaKnown RBP10.41□□□□□ -0.74
CHRNA1-204ENST00000409323 SFTA3P0C7M3 94 aa10.41□□□□□ -0.74
CHRNA1-204ENST00000409323 RBMY1DP0C7P1 496 aaKnown RBP10.41□□□□□ -0.74
CHRNA1-204ENST00000409323 GOLT1AQ6ZVE7 132 aa10.41□□□□□ -0.74
CHRNA1-204ENST00000409323 STHQ8IWL8 128 aa10.41□□□□□ -0.74
CHRNA1-204ENST00000409323 VGLL1Q99990 258 aa10.41□□□□□ -0.74
CHRNA1-204ENST00000409323 ARL2-SNX15V9GYD0 113 aa10.41□□□□□ -0.74
CHRNA1-204ENST00000409323 TRAV8-1A0A0A6YYK1 113 aa10.4□□□□□ -0.74
CHRNA1-204ENST00000409323 A0A0J9YX75 114 aa10.4□□□□□ -0.74
CHRNA1-204ENST00000409323 IFNA1P01562 189 aa10.4□□□□□ -0.74
CHRNA1-204ENST00000409323 CNN1P51911 297 aaKnown RBP10.4□□□□□ -0.74
CHRNA1-204ENST00000409323 EBLN2Q6P2I7 272 aa10.4□□□□□ -0.74
CHRNA1-204ENST00000409323 FOXI2Q6ZQN5 318 aa10.4□□□□□ -0.74
CHRNA1-204ENST00000409323 LYPD1Q8N2G4 141 aa10.4□□□□□ -0.74
CHRNA1-204ENST00000409323 OR8A1Q8NGG7 326 aa10.4□□□□□ -0.74
CHRNA1-204ENST00000409323 Q8TAT8 98 aa10.4□□□□□ -0.74
CHRNA1-204ENST00000409323 LINC00479Q96M42 142 aa10.4□□□□□ -0.74
CHRNA1-204ENST00000409323 TRAV34A0A0B4J273 112 aa10.39□□□□□ -0.75
CHRNA1-204ENST00000409323 SCO2A0A1W2PP80 73 aa10.39□□□□□ -0.75
CHRNA1-204ENST00000409323 DIRC3C9JPN6 131 aa10.39□□□□□ -0.75
CHRNA1-204ENST00000409323 C11orf94C9JXX5 98 aa10.39□□□□□ -0.75
CHRNA1-204ENST00000409323 F8W036 122 aa10.39□□□□□ -0.75
CHRNA1-204ENST00000409323 H3BMM0 161 aa10.39□□□□□ -0.75
CHRNA1-204ENST00000409323 J3KRW8 73 aa10.39□□□□□ -0.75
CHRNA1-204ENST00000409323 CSN1S1P47710 185 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms