RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 LINC00336Q6ZUF6 198 aa6.48□□□□□ -1.37
SNORD88A-201ENST00000408314 CCDC28AQ8IWP9 274 aa6.48□□□□□ -1.37
SNORD88A-201ENST00000408314 BAP18Q8IXM2 172 aa6.48□□□□□ -1.37
SNORD88A-201ENST00000408314 ODF3Q96PU9 254 aa6.48□□□□□ -1.37
SNORD88A-201ENST00000408314 AAMDCQ9H7C9 122 aa6.48□□□□□ -1.37
SNORD88A-201ENST00000408314 TMEM14CQ9P0S9 112 aa6.48□□□□□ -1.37
SNORD88A-201ENST00000408314 TRAV12-2A0A075B6T6 113 aa6.47□□□□□ -1.37
SNORD88A-201ENST00000408314 ATP5G1P05496 136 aa6.47□□□□□ -1.37
SNORD88A-201ENST00000408314 HIST1H1EP10412 219 aaKnown RBP6.47□□□□□ -1.37
SNORD88A-201ENST00000408314 ATP5G3P48201 142 aa6.47□□□□□ -1.37
SNORD88A-201ENST00000408314 FAM3BP58499 235 aaPredicted RBP6.47□□□□□ -1.37
SNORD88A-201ENST00000408314 RNF212Q495C1 297 aa6.47□□□□□ -1.37
SNORD88A-201ENST00000408314 OR5C1Q8NGR4 320 aa6.47□□□□□ -1.37
SNORD88A-201ENST00000408314 TMEM263Q8WUH6 116 aaKnown RBP6.47□□□□□ -1.37
SNORD88A-201ENST00000408314 NPCDR1Q9BY65 106 aa6.47□□□□□ -1.37
SNORD88A-201ENST00000408314 MRPL32Q9BYC8 188 aaKnown RBP6.47□□□□□ -1.37
SNORD88A-201ENST00000408314 BATF3Q9NR55 127 aa6.47□□□□□ -1.37
SNORD88A-201ENST00000408314 TIMM9Q9Y5J7 89 aa6.47□□□□□ -1.37
SNORD88A-201ENST00000408314 TIMM8BQ9Y5J9 83 aaPredicted RBP6.47□□□□□ -1.37
SNORD88A-201ENST00000408314 DNAH6Q9C0G6 4158 aa6.47□□□□□ -1.37
SNORD88A-201ENST00000408314 A6NHS1 94 aa6.46□□□□□ -1.38
SNORD88A-201ENST00000408314 ZNF705GA8MUZ8 300 aaPredicted RBP6.46□□□□□ -1.38
SNORD88A-201ENST00000408314 SSNA1O43805 119 aa6.46□□□□□ -1.38
SNORD88A-201ENST00000408314 LRRC37A5PQ49AS3 106 aa6.46□□□□□ -1.38
SNORD88A-201ENST00000408314 SOHLH1Q5JUK2 328 aa6.46□□□□□ -1.38
SNORD88A-201ENST00000408314 TRBV19A0A075B6N1 114 aa6.45□□□□□ -1.38
SNORD88A-201ENST00000408314 CBY3A6NI87 242 aa6.45□□□□□ -1.38
SNORD88A-201ENST00000408314 SNURFLB1AK76 121 aa6.45□□□□□ -1.38
SNORD88A-201ENST00000408314 NPIPB6E9PJ23 425 aa6.45□□□□□ -1.38
SNORD88A-201ENST00000408314 H3BQ15 152 aa6.45□□□□□ -1.38
SNORD88A-201ENST00000408314 SLC17A3O00476 420 aa6.45□□□□□ -1.38
SNORD88A-201ENST00000408314 SLC25A5P05141 298 aaKnown RBP6.45□□□□□ -1.38
SNORD88A-201ENST00000408314 DEFB130BP0DP73 79 aa6.45□□□□□ -1.38
SNORD88A-201ENST00000408314 DEFB130AP0DP74 79 aa6.45□□□□□ -1.38
SNORD88A-201ENST00000408314 HTN1P15515 57 aa6.45□□□□□ -1.38
SNORD88A-201ENST00000408314 SAT2Q96F10 170 aaPredicted RBP6.45□□□□□ -1.38
SNORD88A-201ENST00000408314 PYGO2Q9BRQ0 406 aa6.45□□□□□ -1.38
SNORD88A-201ENST00000408314 ATG101Q9BSB4 218 aa6.45□□□□□ -1.38
SNORD88A-201ENST00000408314 MARVELD1Q9BSK0 173 aa6.45□□□□□ -1.38
SNORD88A-201ENST00000408314 DNAH10Q8IVF4 4471 aa6.44□□□□□ -1.38
SNORD88A-201ENST00000408314 H3BTX0 84 aa6.44□□□□□ -1.38
SNORD88A-201ENST00000408314 IFNA5P01569 189 aa6.44□□□□□ -1.38
SNORD88A-201ENST00000408314 NHLH2Q02577 135 aa6.44□□□□□ -1.38
SNORD88A-201ENST00000408314 CLINT1Q14677 625 aa6.44□□□□□ -1.38
SNORD88A-201ENST00000408314 LGALS9BQ3B8N2 356 aa6.44□□□□□ -1.38
SNORD88A-201ENST00000408314 TMEM78Q5T7P6 136 aa6.44□□□□□ -1.38
SNORD88A-201ENST00000408314 GFI1BQ5VTD9 330 aa6.44□□□□□ -1.38
SNORD88A-201ENST00000408314 MORN5Q5VZ52 161 aa6.44□□□□□ -1.38
SNORD88A-201ENST00000408314 TMEM88Q6PEY1 159 aa6.44□□□□□ -1.38
SNORD88A-201ENST00000408314 ZNF680Q8NEM1 530 aa6.44□□□□□ -1.38
SNORD88A-201ENST00000408314 THAP6Q8TBB0 222 aa6.44□□□□□ -1.38
SNORD88A-201ENST00000408314 PPP1R1CQ8WVI7 109 aa6.44□□□□□ -1.38
SNORD88A-201ENST00000408314 ATP5SQ99766 215 aa6.44□□□□□ -1.38
SNORD88A-201ENST00000408314 WDR61Q9GZS3 305 aaKnown RBP6.44□□□□□ -1.38
SNORD88A-201ENST00000408314 ZNF586Q9NXT0 402 aa6.44□□□□□ -1.38
SNORD88A-201ENST00000408314 KMT2AQ03164 3969 aa6.43□□□□□ -1.38
SNORD88A-201ENST00000408314 TRAV5A0A0B4J249 113 aa6.43□□□□□ -1.38
SNORD88A-201ENST00000408314 F5H768 121 aa6.43□□□□□ -1.38
SNORD88A-201ENST00000408314 SIX6O95475 246 aa6.43□□□□□ -1.38
SNORD88A-201ENST00000408314 NMBP08949 121 aa6.43□□□□□ -1.38
SNORD88A-201ENST00000408314 SNRPCP09234 159 aaKnown RBP6.43□□□□□ -1.38
SNORD88A-201ENST00000408314 CSN1S1P47710 185 aa6.43□□□□□ -1.38
SNORD88A-201ENST00000408314 TAS2R45P59539 299 aa6.43□□□□□ -1.38
SNORD88A-201ENST00000408314 SCGB1C1Q8TD33 95 aa6.43□□□□□ -1.38
SNORD88A-201ENST00000408314 RNASE8Q8TDE3 154 aaKnown RBP6.43□□□□□ -1.38
SNORD88A-201ENST00000408314 BLNKQ8WV28 456 aa6.43□□□□□ -1.38
SNORD88A-201ENST00000408314 LINC00477Q96M19 166 aa6.43□□□□□ -1.38
SNORD88A-201ENST00000408314 OR51M1Q9H341 326 aa6.43□□□□□ -1.38
SNORD88A-201ENST00000408314 OR5AC2Q9NZP5 309 aa6.43□□□□□ -1.38
SNORD88A-201ENST00000408314 FUT9Q9Y231 359 aa6.43□□□□□ -1.38
SNORD88A-201ENST00000408314 TRBV7-9A0A0J9YWB2 115 aa6.42□□□□□ -1.38
SNORD88A-201ENST00000408314 C7orf71A4D174 169 aa6.42□□□□□ -1.38
SNORD88A-201ENST00000408314 PRAC2D3DTV9 90 aa6.42□□□□□ -1.38
SNORD88A-201ENST00000408314 OR7C2O60412 319 aa6.42□□□□□ -1.38
SNORD88A-201ENST00000408314 MPC2O95563 127 aa6.42□□□□□ -1.38
SNORD88A-201ENST00000408314 NBEAP1P0C6P0 100 aa6.42□□□□□ -1.38
SNORD88A-201ENST00000408314 AZU1P20160 251 aa6.42□□□□□ -1.38
SNORD88A-201ENST00000408314 CCL18P55774 89 aa6.42□□□□□ -1.38
SNORD88A-201ENST00000408314 KHDC3LQ587J8 217 aa6.42□□□□□ -1.38
SNORD88A-201ENST00000408314 LYPD1Q8N2G4 141 aa6.42□□□□□ -1.38
SNORD88A-201ENST00000408314 PAXXQ9BUH6 204 aa6.42□□□□□ -1.38
SNORD88A-201ENST00000408314 NOP10Q9NPE3 64 aaKnown RBP6.42□□□□□ -1.38
SNORD88A-201ENST00000408314 HSPB11Q9Y547 144 aa6.42□□□□□ -1.38
SNORD88A-201ENST00000408314 TRAV12-3A0A0B4J271 114 aa6.41□□□□□ -1.38
SNORD88A-201ENST00000408314 PLAC8L1A1L4L8 177 aa6.41□□□□□ -1.38
SNORD88A-201ENST00000408314 J3KRW8 73 aa6.41□□□□□ -1.38
SNORD88A-201ENST00000408314 M0R3E3 92 aa6.41□□□□□ -1.38
SNORD88A-201ENST00000408314 GPX1P07203 203 aa6.41□□□□□ -1.38
SNORD88A-201ENST00000408314 CT45A10P0DMU9 189 aa6.41□□□□□ -1.38
SNORD88A-201ENST00000408314 PYYP10082 97 aa6.41□□□□□ -1.38
SNORD88A-201ENST00000408314 CRISP2P16562 243 aa6.41□□□□□ -1.38
SNORD88A-201ENST00000408314 RPL12P30050 165 aaKnown RBP6.41□□□□□ -1.38
SNORD88A-201ENST00000408314 H2BFSP57053 126 aa6.41□□□□□ -1.38
SNORD88A-201ENST00000408314 UBE2L3P68036 154 aaKnown RBP6.41□□□□□ -1.38
SNORD88A-201ENST00000408314 IFITM3Q01628 133 aa6.41□□□□□ -1.38
SNORD88A-201ENST00000408314 ICAM4Q14773 271 aa6.41□□□□□ -1.38
SNORD88A-201ENST00000408314 FAM74A1Q5RGS3 127 aa6.41□□□□□ -1.38
SNORD88A-201ENST00000408314 C9orf47Q6ZRZ4 202 aa6.41□□□□□ -1.38
SNORD88A-201ENST00000408314 MIR17HGQ75NE6 70 aa6.41□□□□□ -1.38
SNORD88A-201ENST00000408314 RNF141Q8WVD5 230 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms