RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 RPS25P62851 125 aaKnown RBP1.32□□□□□ -2.2
PTPN12-202ENST00000407343 EIF5AP63241 154 aaKnown RBP1.32□□□□□ -2.2
PTPN12-202ENST00000407343 HBBP68871 147 aa1.32□□□□□ -2.2
PTPN12-202ENST00000407343 EMX2Q04743 252 aa1.32□□□□□ -2.2
PTPN12-202ENST00000407343 NEDD8Q15843 81 aa1.32□□□□□ -2.2
PTPN12-202ENST00000407343 TMEM244Q5VVB8 128 aa1.32□□□□□ -2.2
PTPN12-202ENST00000407343 C22orf39Q6P5X5 142 aa1.32□□□□□ -2.2
PTPN12-202ENST00000407343 LINC00305Q7Z4B0 112 aa1.32□□□□□ -2.2
PTPN12-202ENST00000407343 TRAPPC6BQ86SZ2 158 aa1.32□□□□□ -2.2
PTPN12-202ENST00000407343 LINC00311Q8N616 119 aa1.32□□□□□ -2.2
PTPN12-202ENST00000407343 C3orf56Q8N813 242 aa1.32□□□□□ -2.2
PTPN12-202ENST00000407343 OR51A4Q8NGJ6 313 aa1.32□□□□□ -2.2
PTPN12-202ENST00000407343 ARL11Q969Q4 196 aa1.32□□□□□ -2.2
PTPN12-202ENST00000407343 TMEM203Q969S6 136 aa1.32□□□□□ -2.2
PTPN12-202ENST00000407343 HIST1H2BLQ99880 126 aa1.32□□□□□ -2.2
PTPN12-202ENST00000407343 GINS4Q9BRT9 223 aa1.32□□□□□ -2.2
PTPN12-202ENST00000407343 LXNQ9BS40 222 aa1.32□□□□□ -2.2
PTPN12-202ENST00000407343 TCEAL2Q9H3H9 227 aaPredicted RBP1.32□□□□□ -2.2
PTPN12-202ENST00000407343 TAF9BQ9HBM6 251 aa1.32□□□□□ -2.2
PTPN12-202ENST00000407343 TNFSF18Q9UNG2 199 aa1.32□□□□□ -2.2
PTPN12-202ENST00000407343 MED1Q15648 1581 aaPredicted RBP1.32□□□□□ -2.2
PTPN12-202ENST00000407343 DENND4CQ5VZ89 1909 aa1.32□□□□□ -2.2
PTPN12-202ENST00000407343 CCNB3Q8WWL7 1395 aa1.32□□□□□ -2.2
PTPN12-202ENST00000407343 SMG6Q86US8 1419 aaKnown RBP1.32□□□□□ -2.2
PTPN12-202ENST00000407343 ERBINQ96RT1 1412 aa1.32□□□□□ -2.2
PTPN12-202ENST00000407343 CEP164Q9UPV0 1460 aa1.31□□□□□ -2.2
PTPN12-202ENST00000407343 PLXND1Q9Y4D7 1925 aa1.31□□□□□ -2.2
PTPN12-202ENST00000407343 LOC110117498A0A087WWA1 95 aa1.31□□□□□ -2.2
PTPN12-202ENST00000407343 IGKV2D-26A0A0A0MRZ7 120 aa1.31□□□□□ -2.2
PTPN12-202ENST00000407343 TRAV1-1A0A0B4J248 108 aa1.31□□□□□ -2.2
PTPN12-202ENST00000407343 K7ERU9 68 aa1.31□□□□□ -2.2
PTPN12-202ENST00000407343 PAEPP09466 180 aa1.31□□□□□ -2.2
PTPN12-202ENST00000407343 IGLC6P0CF74 106 aa1.31□□□□□ -2.2
PTPN12-202ENST00000407343 LINC00694P0DN24 101 aa1.31□□□□□ -2.2
PTPN12-202ENST00000407343 FABP2P12104 132 aa1.31□□□□□ -2.2
PTPN12-202ENST00000407343 RPL22P35268 128 aaKnown RBP1.31□□□□□ -2.2
PTPN12-202ENST00000407343 SELENOWP63302 87 aa1.31□□□□□ -2.2
PTPN12-202ENST00000407343 HAGHLQ6PII5 290 aaPredicted RBP1.31□□□□□ -2.2
PTPN12-202ENST00000407343 PATE2Q6UY27 113 aa1.31□□□□□ -2.2
PTPN12-202ENST00000407343 C4orf22Q6V702 233 aa1.31□□□□□ -2.2
PTPN12-202ENST00000407343 SOSTDC1Q6X4U4 206 aa1.31□□□□□ -2.2
PTPN12-202ENST00000407343 FAM19A2Q8N3H0 131 aa1.31□□□□□ -2.2
PTPN12-202ENST00000407343 TEX29Q8N6K0 151 aa1.31□□□□□ -2.2
PTPN12-202ENST00000407343 OR4S1Q8NGB4 309 aa1.31□□□□□ -2.2
PTPN12-202ENST00000407343 BRK1Q8WUW1 75 aa1.31□□□□□ -2.2
PTPN12-202ENST00000407343 NAT14Q8WUY8 206 aa1.31□□□□□ -2.2
PTPN12-202ENST00000407343 C14orf144Q96I85 54 aa1.31□□□□□ -2.2
PTPN12-202ENST00000407343 YPEL2Q96QA6 119 aa1.31□□□□□ -2.2
PTPN12-202ENST00000407343 COA4Q9NYJ1 87 aa1.31□□□□□ -2.2
PTPN12-202ENST00000407343 SNURFQ9Y675 71 aa1.31□□□□□ -2.2
PTPN12-202ENST00000407343 RIMS1Q86UR5 1692 aaKnown RBP1.31□□□□□ -2.2
PTPN12-202ENST00000407343 DSPPQ9NZW4 1301 aa1.31□□□□□ -2.2
PTPN12-202ENST00000407343 ARHGEF11O15085 1522 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 TRAV13-1A0A0B4J241 112 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 TRBV27A0A0K0K1C4 114 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 ZNF727A8MUV8 499 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 H3BMG7 143 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 NPFFO15130 113 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 NDUFB3O43676 98 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 OR1I1O60431 355 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 HIST1H2BKO60814 126 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 HIST1H2BJP06899 126 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 RPL35P42766 123 aaKnown RBP1.3□□□□□ -2.2
PTPN12-202ENST00000407343 NDUFA6P56556 154 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 MAXP61244 160 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 DIAPH2-AS1Q14236 149 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 KHDC3LQ587J8 217 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 DPPA3Q6W0C5 159 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 PDZD9Q8IXQ8 264 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 IFT20Q8IY31 132 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 AP1S3Q96PC3 154 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 NPCDR1Q9BY65 106 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 NIT2Q9NQR4 276 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 EPDR1Q9UM22 224 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 RTL9Q8NET4 1388 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 MYH10P35580 1976 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 EML6Q6ZMW3 1958 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 DOCK4Q8N1I0 1966 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 DISP2A7MBM2 1401 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 ARHGAP31Q2M1Z3 1444 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 FGD6Q6ZV73 1430 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 CNTLNQ9NXG0 1405 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 UHRF1BP1LA0JNW5 1464 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 NCAPD3P42695 1498 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 TCOF1Q13428 1488 aaKnown RBP1.3□□□□□ -2.2
PTPN12-202ENST00000407343 MRC2Q9UBG0 1479 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 SYNJ1O43426 1573 aa1.3□□□□□ -2.2
PTPN12-202ENST00000407343 TRGV10A0A0A0MS01 117 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 FAM236AA0A1B0GUQ0 79 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 FAM236BA0A1B0GV22 79 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 FAM92AA1XBS5 289 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 FAM25AB3EWG3 89 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 FAM25CB3EWG5 89 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 FAM25GB3EWG6 89 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 TCL1BO95988 128 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 SMIM6P0DI80 62 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 HLA-EP13747 358 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 BRS3P32247 399 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 SSR2P43308 183 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms