RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 COX11Q9Y6N1 276 aa9.83□□□□□ -0.84
SMCR8-201ENST00000406438 ZMAT4Q9H898 229 aa9.83□□□□□ -0.84
SMCR8-201ENST00000406438 A0A087X0K7 114 aa9.83□□□□□ -0.84
SMCR8-201ENST00000406438 TRBV25-1A0A075B6N4 114 aa9.83□□□□□ -0.84
SMCR8-201ENST00000406438 PAQR4Q8N4S7 273 aaPredicted RBP9.83□□□□□ -0.84
SMCR8-201ENST00000406438 FNDC10F2Z333 226 aa9.82□□□□□ -0.84
SMCR8-201ENST00000406438 PSPNO60542 156 aa9.82□□□□□ -0.84
SMCR8-201ENST00000406438 AMBPP02760 352 aa9.82□□□□□ -0.84
SMCR8-201ENST00000406438 CRYGSP22914 178 aa9.82□□□□□ -0.84
SMCR8-201ENST00000406438 C10orf55Q5SWW7 151 aa9.82□□□□□ -0.84
SMCR8-201ENST00000406438 ZNF329Q86UD4 541 aa9.82□□□□□ -0.84
SMCR8-201ENST00000406438 A0A1B0GW64 132 aa9.82□□□□□ -0.84
SMCR8-201ENST00000406438 CD59P13987 128 aa9.82□□□□□ -0.84
SMCR8-201ENST00000406438 GLRX5Q86SX6 157 aa9.82□□□□□ -0.84
SMCR8-201ENST00000406438 BMPERQ8N8U9 685 aa9.82□□□□□ -0.84
SMCR8-201ENST00000406438 ZNF362Q5T0B9 420 aaPredicted RBP9.82□□□□□ -0.84
SMCR8-201ENST00000406438 IL17RELQ6ZVW7 336 aa9.82□□□□□ -0.84
SMCR8-201ENST00000406438 CD177Q8N6Q3 437 aa9.82□□□□□ -0.84
SMCR8-201ENST00000406438 TRBV24-1A0A075B6N3 115 aa9.82□□□□□ -0.84
SMCR8-201ENST00000406438 RMI2Q96E14 147 aa9.82□□□□□ -0.84
SMCR8-201ENST00000406438 UNQ6494/PRO21346Q6UXR6 183 aa9.81□□□□□ -0.84
SMCR8-201ENST00000406438 LINC01551Q86U37 167 aa9.81□□□□□ -0.84
SMCR8-201ENST00000406438 hDV102S1A0JD36 115 aa9.81□□□□□ -0.84
SMCR8-201ENST00000406438 RHPN1-AS1Q9BWJ2 59 aa9.81□□□□□ -0.84
SMCR8-201ENST00000406438 SYS1-DBNDD2H3BUS1 97 aa9.81□□□□□ -0.84
SMCR8-201ENST00000406438 INAFM2P0DMQ5 153 aa9.81□□□□□ -0.84
SMCR8-201ENST00000406438 VSIRQ9H7M9 311 aa9.81□□□□□ -0.84
SMCR8-201ENST00000406438 SELLP14151 372 aa9.81□□□□□ -0.84
SMCR8-201ENST00000406438 CT83Q5H943 113 aa9.81□□□□□ -0.84
SMCR8-201ENST00000406438 TMEM75Q8N9X5 138 aa9.81□□□□□ -0.84
SMCR8-201ENST00000406438 DSCR8Q96T75 97 aa9.81□□□□□ -0.84
SMCR8-201ENST00000406438 SYNJ2BPP57105 145 aa9.81□□□□□ -0.84
SMCR8-201ENST00000406438 BPESC1Q9GZL8 116 aa9.81□□□□□ -0.84
SMCR8-201ENST00000406438 MSRB2Q9Y3D2 182 aa9.81□□□□□ -0.84
SMCR8-201ENST00000406438 SPATA31B1PQ5VZV4 182 aa9.8□□□□□ -0.84
SMCR8-201ENST00000406438 FLVCR1-AS1Q8TAF5 88 aa9.8□□□□□ -0.84
SMCR8-201ENST00000406438 HIST3H2BBQ8N257 126 aa9.8□□□□□ -0.84
SMCR8-201ENST00000406438 UBE2WQ96B02 151 aa9.8□□□□□ -0.84
SMCR8-201ENST00000406438 PRRC2AP48634 2157 aaKnown RBP9.8□□□□□ -0.84
SMCR8-201ENST00000406438 GFRA4Q9GZZ7 299 aa9.8□□□□□ -0.84
SMCR8-201ENST00000406438 IGKV1D-8A0A087WSZ0 117 aa9.8□□□□□ -0.84
SMCR8-201ENST00000406438 NABP1Q96AH0 204 aa9.8□□□□□ -0.84
SMCR8-201ENST00000406438 IGKV1-27A0A075B6S5 117 aa9.8□□□□□ -0.84
SMCR8-201ENST00000406438 GAFA1Q96PS6 74 aa9.8□□□□□ -0.84
SMCR8-201ENST00000406438 LY96Q9Y6Y9 160 aa9.8□□□□□ -0.84
SMCR8-201ENST00000406438 GATA4P43694 442 aa9.79□□□□□ -0.84
SMCR8-201ENST00000406438 KIR3DS1Q14943 382 aa9.79□□□□□ -0.84
SMCR8-201ENST00000406438 SONP18583 2426 aaKnown RBP9.79□□□□□ -0.84
SMCR8-201ENST00000406438 MRPL27Q9P0M9 148 aaKnown RBP9.79□□□□□ -0.84
SMCR8-201ENST00000406438 TRAV3A0A0B4J244 114 aa9.79□□□□□ -0.84
SMCR8-201ENST00000406438 H0YIZ8 118 aa9.79□□□□□ -0.84
SMCR8-201ENST00000406438 RHODO00212 210 aa9.79□□□□□ -0.84
SMCR8-201ENST00000406438 CXCL1P09341 107 aa9.79□□□□□ -0.84
SMCR8-201ENST00000406438 C1orf122Q6ZSJ8 110 aa9.79□□□□□ -0.84
SMCR8-201ENST00000406438 I3L3M4 83 aa9.79□□□□□ -0.84
SMCR8-201ENST00000406438 VWCEQ96DN2 955 aa9.79□□□□□ -0.84
SMCR8-201ENST00000406438 IGKV1-12A0A0C4DH73 117 aa9.79□□□□□ -0.84
SMCR8-201ENST00000406438 MMP23AO75900 390 aa9.79□□□□□ -0.84
SMCR8-201ENST00000406438 IGKV1D-12P01611 117 aa9.79□□□□□ -0.84
SMCR8-201ENST00000406438 NEGR1Q7Z3B1 354 aa9.79□□□□□ -0.84
SMCR8-201ENST00000406438 C22orf46C9J442 243 aa9.78□□□□□ -0.84
SMCR8-201ENST00000406438 C9JAW5 83 aa9.78□□□□□ -0.84
SMCR8-201ENST00000406438 SOCS3O14543 225 aa9.78□□□□□ -0.84
SMCR8-201ENST00000406438 SMKR1H3BMG3 65 aa9.78□□□□□ -0.84
SMCR8-201ENST00000406438 FGF16O43320 207 aa9.78□□□□□ -0.84
SMCR8-201ENST00000406438 NTF4P34130 210 aa9.78□□□□□ -0.84
SMCR8-201ENST00000406438 CFHR3Q02985 330 aa9.78□□□□□ -0.84
SMCR8-201ENST00000406438 AZU1P20160 251 aa9.78□□□□□ -0.84
SMCR8-201ENST00000406438 NMSQ5H8A3 153 aa9.78□□□□□ -0.84
SMCR8-201ENST00000406438 AMN1Q8IY45 258 aa9.78□□□□□ -0.84
SMCR8-201ENST00000406438 SPANXA1Q9NS26 97 aa9.78□□□□□ -0.84
SMCR8-201ENST00000406438 NDUFB8O95169 186 aa9.78□□□□□ -0.84
SMCR8-201ENST00000406438 MSMBP08118 114 aa9.78□□□□□ -0.84
SMCR8-201ENST00000406438 A0A087WV48 116 aa9.78□□□□□ -0.84
SMCR8-201ENST00000406438 LINC01619G3V211 115 aa9.78□□□□□ -0.84
SMCR8-201ENST00000406438 DKK1O94907 266 aa9.78□□□□□ -0.84
SMCR8-201ENST00000406438 TMEM14EPQ6UXP3 125 aa9.78□□□□□ -0.84
SMCR8-201ENST00000406438 TRAV25A0A0B4J276 109 aa9.77□□□□□ -0.84
SMCR8-201ENST00000406438 TMEM141Q96I45 108 aa9.77□□□□□ -0.84
SMCR8-201ENST00000406438 TRBV6-6A0A0A6YYG2 114 aa9.77□□□□□ -0.85
SMCR8-201ENST00000406438 DEFB131AP59861 70 aa9.77□□□□□ -0.85
SMCR8-201ENST00000406438 PMVKQ15126 192 aa9.77□□□□□ -0.85
SMCR8-201ENST00000406438 MBD3L4A6NDZ8 208 aaPredicted RBP9.77□□□□□ -0.85
SMCR8-201ENST00000406438 MBD3L3A6NE82 208 aaPredicted RBP9.77□□□□□ -0.85
SMCR8-201ENST00000406438 MBD3L5A6NJ08 208 aaPredicted RBP9.77□□□□□ -0.85
SMCR8-201ENST00000406438 A6NNC1 897 aa9.77□□□□□ -0.85
SMCR8-201ENST00000406438 Q6P435 159 aa9.77□□□□□ -0.85
SMCR8-201ENST00000406438 LHFPL1Q86WI0 220 aa9.77□□□□□ -0.85
SMCR8-201ENST00000406438 RPP25LQ8N5L8 163 aaKnown RBP9.77□□□□□ -0.85
SMCR8-201ENST00000406438 MBD3L2Q8NHZ7 208 aaPredicted RBP9.77□□□□□ -0.85
SMCR8-201ENST00000406438 C1orf194Q5T5A4 169 aa9.77□□□□□ -0.85
SMCR8-201ENST00000406438 EXPH5Q8NEV8 1989 aa9.76□□□□□ -0.85
SMCR8-201ENST00000406438 LINC00473A8K010 186 aa9.76□□□□□ -0.85
SMCR8-201ENST00000406438 hADV29S1A0JD25 119 aa9.76□□□□□ -0.85
SMCR8-201ENST00000406438 GAGE12BA1L429 117 aa9.76□□□□□ -0.85
SMCR8-201ENST00000406438 RNF223E7ERA6 249 aa9.76□□□□□ -0.85
SMCR8-201ENST00000406438 NDUFS5O43920 106 aa9.76□□□□□ -0.85
SMCR8-201ENST00000406438 IGHG3P01860 377 aa9.76□□□□□ -0.85
SMCR8-201ENST00000406438 SPINK13Q1W4C9 94 aa9.76□□□□□ -0.85
SMCR8-201ENST00000406438 GFI1Q99684 422 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms