RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 A0A087WSZ3 146 aa1.33□□□□□ -2.2
HMGB1P17-201ENST00000403495 TRBV6-8A0A0A6YYG3 113 aa1.33□□□□□ -2.2
HMGB1P17-201ENST00000403495 C5orf67F2Z3F1 127 aa1.33□□□□□ -2.2
HMGB1P17-201ENST00000403495 MT-ND4LP03901 98 aa1.33□□□□□ -2.2
HMGB1P17-201ENST00000403495 ZNF93P35789 620 aaPredicted RBP1.33□□□□□ -2.2
HMGB1P17-201ENST00000403495 FOXA3P55318 350 aaPredicted RBP1.33□□□□□ -2.2
HMGB1P17-201ENST00000403495 PSPHP78330 225 aa1.33□□□□□ -2.2
HMGB1P17-201ENST00000403495 CIRBPQ14011 172 aaKnown RBP1.33□□□□□ -2.2
HMGB1P17-201ENST00000403495 TEX261Q6UWH6 196 aa1.33□□□□□ -2.2
HMGB1P17-201ENST00000403495 ARPINQ7Z6K5 226 aa1.33□□□□□ -2.2
HMGB1P17-201ENST00000403495 Q8N2B8 174 aa1.33□□□□□ -2.2
HMGB1P17-201ENST00000403495 C4orf3Q8WVX3 66 aa1.33□□□□□ -2.2
HMGB1P17-201ENST00000403495 CLEC2BQ92478 149 aa1.33□□□□□ -2.2
HMGB1P17-201ENST00000403495 TCEAL4Q96EI5 215 aa1.33□□□□□ -2.2
HMGB1P17-201ENST00000403495 COPZ2Q9P299 210 aa1.33□□□□□ -2.2
HMGB1P17-201ENST00000403495 CHCHD2Q9Y6H1 151 aaPredicted RBP1.33□□□□□ -2.2
HMGB1P17-201ENST00000403495 U3KQ87 197 aa1.33□□□□□ -2.2
HMGB1P17-201ENST00000403495 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P17-201ENST00000403495 ZNF736B4DX44 427 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P17-201ENST00000403495 MRPS14O60783 128 aaKnown RBP1.32□□□□□ -2.2
HMGB1P17-201ENST00000403495 SAA1P0DJI8 122 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P17-201ENST00000403495 CXCL8P10145 99 aa1.32□□□□□ -2.2
HMGB1P17-201ENST00000403495 LSM3P62310 102 aaKnown RBP1.32□□□□□ -2.2
HMGB1P17-201ENST00000403495 HSD17B12Q53GQ0 312 aa1.32□□□□□ -2.2
HMGB1P17-201ENST00000403495 TMEM244Q5VVB8 128 aa1.32□□□□□ -2.2
HMGB1P17-201ENST00000403495 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P17-201ENST00000403495 Q6ZSA8 131 aa1.32□□□□□ -2.2
HMGB1P17-201ENST00000403495 ZNF833PQ6ZTB9 187 aa1.32□□□□□ -2.2
HMGB1P17-201ENST00000403495 GKN2Q86XP6 184 aa1.32□□□□□ -2.2
HMGB1P17-201ENST00000403495 OR5AS1Q8N127 324 aa1.32□□□□□ -2.2
HMGB1P17-201ENST00000403495 CCL4L1Q8NHW4 92 aa1.32□□□□□ -2.2
HMGB1P17-201ENST00000403495 ZNF431Q8TF32 576 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P17-201ENST00000403495 NAA38Q9BRA0 125 aaKnown RBP1.32□□□□□ -2.2
HMGB1P17-201ENST00000403495 FKBP11Q9NYL4 201 aa1.32□□□□□ -2.2
HMGB1P17-201ENST00000403495 KLK9Q9UKQ9 250 aa1.32□□□□□ -2.2
HMGB1P17-201ENST00000403495 SBF1O95248 1867 aa1.32□□□□□ -2.2
HMGB1P17-201ENST00000403495 FREM1Q5H8C1 2179 aa1.32□□□□□ -2.2
HMGB1P17-201ENST00000403495 COL4A1P02462 1669 aa1.32□□□□□ -2.2
HMGB1P17-201ENST00000403495 CR1P17927 2039 aa1.32□□□□□ -2.2
HMGB1P17-201ENST00000403495 MUC6Q6W4X9 2439 aa1.31□□□□□ -2.2
HMGB1P17-201ENST00000403495 TAF1LQ8IZX4 1826 aa1.31□□□□□ -2.2
HMGB1P17-201ENST00000403495 NUP210LQ5VU65 1888 aa1.31□□□□□ -2.2
HMGB1P17-201ENST00000403495 LOC107986453A0A1B0GWG9 222 aa1.31□□□□□ -2.2
HMGB1P17-201ENST00000403495 IGKV2-29A2NJV5 120 aaPredicted RBP1.31□□□□□ -2.2
HMGB1P17-201ENST00000403495 C9orf170A2RU37 121 aa1.31□□□□□ -2.2
HMGB1P17-201ENST00000403495 UQCRQO14949 82 aa1.31□□□□□ -2.2
HMGB1P17-201ENST00000403495 TRACP01848 142 aa1.31□□□□□ -2.2
HMGB1P17-201ENST00000403495 TCRAP04437 139 aa1.31□□□□□ -2.2
HMGB1P17-201ENST00000403495 COX4I1P13073 169 aa1.31□□□□□ -2.2
HMGB1P17-201ENST00000403495 CNBPP62633 177 aaKnown RBP1.31□□□□□ -2.2
HMGB1P17-201ENST00000403495 DEFB115Q30KQ5 88 aa1.31□□□□□ -2.2
HMGB1P17-201ENST00000403495 CCDC58Q4VC31 144 aa1.31□□□□□ -2.2
HMGB1P17-201ENST00000403495 FAM74A1Q5RGS3 127 aa1.31□□□□□ -2.2
HMGB1P17-201ENST00000403495 OR5AK2Q8NH90 309 aa1.31□□□□□ -2.2
HMGB1P17-201ENST00000403495 Q8TAT8 98 aa1.31□□□□□ -2.2
HMGB1P17-201ENST00000403495 MAGOHBQ96A72 148 aaKnown RBP1.31□□□□□ -2.2
HMGB1P17-201ENST00000403495 BANF2Q9H503 90 aa1.31□□□□□ -2.2
HMGB1P17-201ENST00000403495 COL4A5P29400 1685 aa1.31□□□□□ -2.2
HMGB1P17-201ENST00000403495 CPDO75976 1380 aa1.31□□□□□ -2.2
HMGB1P17-201ENST00000403495 N4BP2Q86UW6 1770 aaPredicted RBP1.31□□□□□ -2.2
HMGB1P17-201ENST00000403495 MED13Q9UHV7 2174 aa1.31□□□□□ -2.2
HMGB1P17-201ENST00000403495 NUP98P52948 1817 aa1.31□□□□□ -2.2
HMGB1P17-201ENST00000403495 OBSL1O75147 1896 aa1.31□□□□□ -2.2
HMGB1P17-201ENST00000403495 HBDP02042 147 aa1.3□□□□□ -2.2
HMGB1P17-201ENST00000403495 SLC25A5P05141 298 aaKnown RBP1.3□□□□□ -2.2
HMGB1P17-201ENST00000403495 MPC1LP0DKB6 136 aa1.3□□□□□ -2.2
HMGB1P17-201ENST00000403495 HIST1H1AQ02539 215 aaPredicted RBP1.3□□□□□ -2.2
HMGB1P17-201ENST00000403495 DIAPH2-AS1Q14236 149 aa1.3□□□□□ -2.2
HMGB1P17-201ENST00000403495 HAGHLQ6PII5 290 aaPredicted RBP1.3□□□□□ -2.2
HMGB1P17-201ENST00000403495 TEN1Q86WV5 123 aa1.3□□□□□ -2.2
HMGB1P17-201ENST00000403495 OR4S1Q8NGB4 309 aa1.3□□□□□ -2.2
HMGB1P17-201ENST00000403495 PATE1Q8WXA2 126 aa1.3□□□□□ -2.2
HMGB1P17-201ENST00000403495 PFDN5Q99471 154 aa1.3□□□□□ -2.2
HMGB1P17-201ENST00000403495 TSC22D3Q99576 134 aa1.3□□□□□ -2.2
HMGB1P17-201ENST00000403495 SMIM3Q9BZL3 60 aa1.3□□□□□ -2.2
HMGB1P17-201ENST00000403495 CST11Q9H112 138 aa1.3□□□□□ -2.2
HMGB1P17-201ENST00000403495 MED9Q9NWA0 146 aa1.3□□□□□ -2.2
HMGB1P17-201ENST00000403495 RTTNQ86VV8 2226 aa1.3□□□□□ -2.2
HMGB1P17-201ENST00000403495 OTOGLQ3ZCN5 2332 aa1.29□□□□□ -2.2
HMGB1P17-201ENST00000403495 MYH3P11055 1940 aa1.29□□□□□ -2.2
HMGB1P17-201ENST00000403495 MYH11P35749 1972 aa1.29□□□□□ -2.2
HMGB1P17-201ENST00000403495 A0A096LPI6 279 aa1.29□□□□□ -2.2
HMGB1P17-201ENST00000403495 CCL16O15467 120 aa1.29□□□□□ -2.2
HMGB1P17-201ENST00000403495 SMIM24O75264 130 aa1.29□□□□□ -2.2
HMGB1P17-201ENST00000403495 EVI2AP22794 236 aa1.29□□□□□ -2.2
HMGB1P17-201ENST00000403495 BLCAPP62952 87 aa1.29□□□□□ -2.2
HMGB1P17-201ENST00000403495 KRTAP26-1Q6PEX3 210 aa1.29□□□□□ -2.2
HMGB1P17-201ENST00000403495 GLIPR1L1Q6UWM5 242 aa1.29□□□□□ -2.2
HMGB1P17-201ENST00000403495 TSTD1Q8NFU3 115 aa1.29□□□□□ -2.2
HMGB1P17-201ENST00000403495 OR8J3Q8NGG0 315 aa1.29□□□□□ -2.2
HMGB1P17-201ENST00000403495 PSMF1Q92530 271 aa1.29□□□□□ -2.2
HMGB1P17-201ENST00000403495 LINC00052Q96N35 136 aa1.29□□□□□ -2.2
HMGB1P17-201ENST00000403495 CDC42SE1Q9NRR8 79 aa1.29□□□□□ -2.2
HMGB1P17-201ENST00000403495 ORMDL1Q9P0S3 153 aa1.29□□□□□ -2.2
HMGB1P17-201ENST00000403495 SNURFQ9Y675 71 aa1.29□□□□□ -2.2
HMGB1P17-201ENST00000403495 SOGA1O94964 1423 aa1.29□□□□□ -2.2
HMGB1P17-201ENST00000403495 MYH2Q9UKX2 1941 aa1.28□□□□□ -2.2
HMGB1P17-201ENST00000403495 C3orf85A0A1B0GTC6 90 aa1.28□□□□□ -2.2
HMGB1P17-201ENST00000403495 F8W1H4 67 aa1.28□□□□□ -2.2
HMGB1P17-201ENST00000403495 M0R2Z0 102 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms