RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 FAM231DQ6ZW35 169 aa19.52■□□□□ 0.71
CPNE1-205ENST00000401607 IL36BQ9NZH7 164 aa19.52■□□□□ 0.71
CPNE1-205ENST00000401607 PSG8Q9UQ74 426 aa19.52■□□□□ 0.71
CPNE1-205ENST00000401607 OTOGQ6ZRI0 2925 aa19.51■□□□□ 0.71
CPNE1-205ENST00000401607 SERTM2A0A1B0GWG4 89 aa19.51■□□□□ 0.71
CPNE1-205ENST00000401607 A0A1W2PPQ1 181 aa19.51■□□□□ 0.71
CPNE1-205ENST00000401607 RPS10P46783 165 aaKnown RBP19.51■□□□□ 0.71
CPNE1-205ENST00000401607 FOXL1Q12952 345 aa19.51■□□□□ 0.71
CPNE1-205ENST00000401607 TMEM183AQ8IXX5 376 aa19.51■□□□□ 0.71
CPNE1-205ENST00000401607 WIPF2Q8TF74 440 aaPredicted RBP19.51■□□□□ 0.71
CPNE1-205ENST00000401607 RHPN1-AS1Q9BWJ2 59 aa19.51■□□□□ 0.71
CPNE1-205ENST00000401607 SMPXQ9UHP9 88 aa19.51■□□□□ 0.71
CPNE1-205ENST00000401607 IGKV2-40A0A087WW87 121 aaPredicted RBP19.5■□□□□ 0.71
CPNE1-205ENST00000401607 ZNF705FA8MVS1 300 aaPredicted RBP19.5■□□□□ 0.71
CPNE1-205ENST00000401607 IGKV2D-40P01614 121 aaPredicted RBP19.5■□□□□ 0.71
CPNE1-205ENST00000401607 PRR27Q6MZM9 219 aa19.5■□□□□ 0.71
CPNE1-205ENST00000401607 RNF182Q8N6D2 247 aa19.5■□□□□ 0.71
CPNE1-205ENST00000401607 MLXQ9UH92 298 aa19.5■□□□□ 0.71
CPNE1-205ENST00000401607 CDX1P47902 265 aaPredicted RBP19.49■□□□□ 0.71
CPNE1-205ENST00000401607 LCN12Q6JVE5 192 aa19.49■□□□□ 0.71
CPNE1-205ENST00000401607 UFC1Q9Y3C8 167 aa19.49■□□□□ 0.71
CPNE1-205ENST00000401607 CUBNO60494 3623 aa19.49■□□□□ 0.71
CPNE1-205ENST00000401607 LINC00322Q6ZN03 302 aaPredicted RBP19.49■□□□□ 0.71
CPNE1-205ENST00000401607 ASCL2Q99929 193 aa19.49■□□□□ 0.71
CPNE1-205ENST00000401607 TMEM213A2RRL7 107 aa19.48■□□□□ 0.71
CPNE1-205ENST00000401607 REC114Q7Z4M0 266 aa19.48■□□□□ 0.71
CPNE1-205ENST00000401607 NUDT10Q8NFP7 164 aa19.48■□□□□ 0.71
CPNE1-205ENST00000401607 NUDT11Q96G61 164 aa19.48■□□□□ 0.71
CPNE1-205ENST00000401607 C1orf196B1AJZ1 125 aa19.47■□□□□ 0.71
CPNE1-205ENST00000401607 HOXD3P31249 432 aaPredicted RBP19.47■□□□□ 0.71
CPNE1-205ENST00000401607 ZFP82Q8N141 532 aa19.47■□□□□ 0.71
CPNE1-205ENST00000401607 C16orf95Q9H693 158 aa19.47■□□□□ 0.71
CPNE1-205ENST00000401607 ZFP30Q9Y2G7 519 aa19.47■□□□□ 0.71
CPNE1-205ENST00000401607 ZNF492Q9P255 531 aa19.47■□□□□ 0.71
CPNE1-205ENST00000401607 ZNF705GA8MUZ8 300 aaPredicted RBP19.46■□□□□ 0.71
CPNE1-205ENST00000401607 A8MWP6 167 aa19.46■□□□□ 0.71
CPNE1-205ENST00000401607 PRAC2D3DTV9 90 aa19.46■□□□□ 0.71
CPNE1-205ENST00000401607 SYNJ2BPP57105 145 aa19.46■□□□□ 0.71
CPNE1-205ENST00000401607 C4orf3Q8WVX3 66 aa19.46■□□□□ 0.71
CPNE1-205ENST00000401607 C19orf71A6NCJ1 209 aa19.45■□□□□ 0.7
CPNE1-205ENST00000401607 LGALS9O00182 355 aa19.45■□□□□ 0.7
CPNE1-205ENST00000401607 SOCS3O14543 225 aa19.45■□□□□ 0.7
CPNE1-205ENST00000401607 DEFB136Q30KP8 78 aa19.45■□□□□ 0.7
CPNE1-205ENST00000401607 MRPL53Q96EL3 112 aaKnown RBP19.45■□□□□ 0.7
CPNE1-205ENST00000401607 VGLL1Q99990 258 aa19.45■□□□□ 0.7
CPNE1-205ENST00000401607 LOC105371267A0A1B0GV96 52 aa19.44■□□□□ 0.7
CPNE1-205ENST00000401607 GATCO43716 136 aaKnown RBP19.44■□□□□ 0.7
CPNE1-205ENST00000401607 RAB5BP61020 215 aa19.44■□□□□ 0.7
CPNE1-205ENST00000401607 LINC01006Q8NI28 216 aa19.44■□□□□ 0.7
CPNE1-205ENST00000401607 C16orf92Q96LL3 132 aa19.44■□□□□ 0.7
CPNE1-205ENST00000401607 BIN3Q9NQY0 253 aa19.44■□□□□ 0.7
CPNE1-205ENST00000401607 NOTCH2Q04721 2471 aa19.44■□□□□ 0.7
CPNE1-205ENST00000401607 CA1P00915 261 aaPredicted RBP19.44■□□□□ 0.7
CPNE1-205ENST00000401607 TYMSP04818 313 aa19.44■□□□□ 0.7
CPNE1-205ENST00000401607 HIST2H2BDQ6DRA6 164 aa19.44■□□□□ 0.7
CPNE1-205ENST00000401607 ZC2HC1AQ96GY0 325 aa19.44■□□□□ 0.7
CPNE1-205ENST00000401607 SRD5A3Q9H8P0 318 aa19.44■□□□□ 0.7
CPNE1-205ENST00000401607 INAFM1C9JVW0 142 aa19.43■□□□□ 0.7
CPNE1-205ENST00000401607 FOSL1P15407 271 aa19.43■□□□□ 0.7
CPNE1-205ENST00000401607 KHDC1LQ5JSQ8 128 aa19.43■□□□□ 0.7
CPNE1-205ENST00000401607 SELENOKQ9Y6D0 94 aa19.43■□□□□ 0.7
CPNE1-205ENST00000401607 FBLL1A6NHQ2 334 aaKnown RBP19.42■□□□□ 0.7
CPNE1-205ENST00000401607 NRN1Q9NPD7 142 aa19.42■□□□□ 0.7
CPNE1-205ENST00000401607 TRAV9-1A0A075B6T8 112 aa19.42■□□□□ 0.7
CPNE1-205ENST00000401607 SMIM27A0A1W2PRY6 76 aa19.42■□□□□ 0.7
CPNE1-205ENST00000401607 TRGC2P03986 189 aa19.42■□□□□ 0.7
CPNE1-205ENST00000401607 KLF5Q13887 457 aaPredicted RBP19.42■□□□□ 0.7
CPNE1-205ENST00000401607 GBGT1Q8N5D6 347 aa19.42■□□□□ 0.7
CPNE1-205ENST00000401607 C20orf173Q96LM9 149 aa19.42■□□□□ 0.7
CPNE1-205ENST00000401607 C8orf49Q96NF6 230 aa19.42■□□□□ 0.7
CPNE1-205ENST00000401607 CLEC5AQ9NY25 188 aa19.42■□□□□ 0.7
CPNE1-205ENST00000401607 HIVEP2P31629 2446 aa19.41■□□□□ 0.7
CPNE1-205ENST00000401607 RBAKDNA6NC62 111 aa19.41■□□□□ 0.7
CPNE1-205ENST00000401607 SLURP1P55000 103 aa19.41■□□□□ 0.7
CPNE1-205ENST00000401607 RPL11P62913 178 aaKnown RBP19.41■□□□□ 0.7
CPNE1-205ENST00000401607 TCF24Q7RTU0 167 aa19.41■□□□□ 0.7
CPNE1-205ENST00000401607 KLHL30-AS1Q8NEE0 82 aa19.41■□□□□ 0.7
CPNE1-205ENST00000401607 Q8TAT8 98 aa19.41■□□□□ 0.7
CPNE1-205ENST00000401607 LINC01619G3V211 115 aa19.4■□□□□ 0.7
CPNE1-205ENST00000401607 OR11H1Q8NG94 326 aa19.4■□□□□ 0.7
CPNE1-205ENST00000401607 BTF3L4Q96K17 158 aa19.4■□□□□ 0.7
CPNE1-205ENST00000401607 JMJD8Q96S16 334 aa19.4■□□□□ 0.7
CPNE1-205ENST00000401607 TCL1AP56279 114 aa19.39■□□□□ 0.7
CPNE1-205ENST00000401607 ERCC8Q13216 396 aa19.39■□□□□ 0.7
CPNE1-205ENST00000401607 PRR25Q96S07 402 aa19.39■□□□□ 0.7
CPNE1-205ENST00000401607 IGKV3-7A0A075B6H7 116 aa19.39■□□□□ 0.69
CPNE1-205ENST00000401607 NPIPB6E9PJ23 425 aa19.39■□□□□ 0.69
CPNE1-205ENST00000401607 PHOX2AO14813 284 aa19.39■□□□□ 0.69
CPNE1-205ENST00000401607 BMI1P35226 326 aa19.39■□□□□ 0.69
CPNE1-205ENST00000401607 CRIP1P50238 77 aa19.39■□□□□ 0.69
CPNE1-205ENST00000401607 COX8CQ7Z4L0 72 aa19.39■□□□□ 0.69
CPNE1-205ENST00000401607 WFDC12Q8WWY7 111 aa19.39■□□□□ 0.69
CPNE1-205ENST00000401607 RPP21Q9H633 154 aaKnown RBP19.39■□□□□ 0.69
CPNE1-205ENST00000401607 P01737 135 aa19.38■□□□□ 0.69
CPNE1-205ENST00000401607 CD28P10747 220 aa19.38■□□□□ 0.69
CPNE1-205ENST00000401607 OR1N2Q8NGR9 330 aa19.38■□□□□ 0.69
CPNE1-205ENST00000401607 DUX3Q96PT4 197 aa19.38■□□□□ 0.69
CPNE1-205ENST00000401607 C2orf70A6NJV1 201 aa19.37■□□□□ 0.69
CPNE1-205ENST00000401607 NDUFA7O95182 113 aa19.37■□□□□ 0.69
CPNE1-205ENST00000401607 SAPCD1Q5SSQ6 148 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms