RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 CFHR2P36980 270 aa14.6□□□□□ -0.07
COL18A1-204ENST00000400337 GATA3P23771 443 aa14.6□□□□□ -0.07
COL18A1-204ENST00000400337 YPEL3P61236 119 aaPredicted RBP14.6□□□□□ -0.07
COL18A1-204ENST00000400337 TMEM95Q3KNT9 176 aa14.6□□□□□ -0.07
COL18A1-204ENST00000400337 SHANK1Q9Y566 2161 aa14.6□□□□□ -0.07
COL18A1-204ENST00000400337 Q5PR19 223 aa14.59□□□□□ -0.07
COL18A1-204ENST00000400337 OR2K2Q8NGT1 345 aa14.59□□□□□ -0.07
COL18A1-204ENST00000400337 ZNF479Q96JC4 524 aa14.59□□□□□ -0.07
COL18A1-204ENST00000400337 PLXND1Q9Y4D7 1925 aa14.59□□□□□ -0.07
COL18A1-204ENST00000400337 ARMS2P0C7Q2 107 aa14.59□□□□□ -0.07
COL18A1-204ENST00000400337 WT1-ASQ06250 92 aa14.59□□□□□ -0.07
COL18A1-204ENST00000400337 DIAPH2-AS1Q14236 149 aa14.59□□□□□ -0.07
COL18A1-204ENST00000400337 A0A087WX48 190 aa14.59□□□□□ -0.07
COL18A1-204ENST00000400337 TMEM158Q8WZ71 300 aa14.59□□□□□ -0.07
COL18A1-204ENST00000400337 ARFGEF3Q5TH69 2177 aa14.59□□□□□ -0.07
COL18A1-204ENST00000400337 LINC00311Q8N616 119 aa14.59□□□□□ -0.07
COL18A1-204ENST00000400337 CYYR1Q96J86 154 aa14.59□□□□□ -0.07
COL18A1-204ENST00000400337 MRPL27Q9P0M9 148 aaKnown RBP14.59□□□□□ -0.07
COL18A1-204ENST00000400337 INSP01308 110 aa14.59□□□□□ -0.07
COL18A1-204ENST00000400337 DEFB131AP59861 70 aa14.59□□□□□ -0.07
COL18A1-204ENST00000400337 IL17RELQ6ZVW7 336 aa14.59□□□□□ -0.07
COL18A1-204ENST00000400337 A0A1B0GV72 72 aa14.58□□□□□ -0.07
COL18A1-204ENST00000400337 WT1P19544 449 aaPredicted RBP14.58□□□□□ -0.07
COL18A1-204ENST00000400337 NBL1P41271 181 aa14.58□□□□□ -0.07
COL18A1-204ENST00000400337 GUSBP1Q15486 140 aa14.58□□□□□ -0.07
COL18A1-204ENST00000400337 ZNF726P1Q15940 193 aa14.58□□□□□ -0.08
COL18A1-204ENST00000400337 DTX2Q86UW9 622 aa14.58□□□□□ -0.08
COL18A1-204ENST00000400337 PRSS33Q8NF86 280 aa14.58□□□□□ -0.08
COL18A1-204ENST00000400337 GTF3C1Q12789 2109 aa14.57□□□□□ -0.08
COL18A1-204ENST00000400337 SAMD5Q5TGI4 173 aa14.57□□□□□ -0.08
COL18A1-204ENST00000400337 MCRIP2Q9BUT9 160 aaKnown RBP14.57□□□□□ -0.08
COL18A1-204ENST00000400337 SYS1-DBNDD2H3BUS1 97 aa14.57□□□□□ -0.08
COL18A1-204ENST00000400337 FRMPD3Q5JV73 1810 aa14.57□□□□□ -0.08
COL18A1-204ENST00000400337 LINC00158P58513 81 aa14.56□□□□□ -0.08
COL18A1-204ENST00000400337 GFRA4Q9GZZ7 299 aa14.56□□□□□ -0.08
COL18A1-204ENST00000400337 PGPEP1Q9NXJ5 209 aa14.56□□□□□ -0.08
COL18A1-204ENST00000400337 TRBV19A0A075B6N1 114 aa14.56□□□□□ -0.08
COL18A1-204ENST00000400337 TEX43Q6ZNM6 134 aa14.56□□□□□ -0.08
COL18A1-204ENST00000400337 PCNX2A6NKB5 2137 aa14.56□□□□□ -0.08
COL18A1-204ENST00000400337 TMEM75Q8N9X5 138 aa14.56□□□□□ -0.08
COL18A1-204ENST00000400337 C8orf49Q96NF6 230 aa14.56□□□□□ -0.08
COL18A1-204ENST00000400337 NAA38Q9BRA0 125 aaKnown RBP14.56□□□□□ -0.08
COL18A1-204ENST00000400337 C11orf68Q9H3H3 251 aaKnown RBP14.56□□□□□ -0.08
COL18A1-204ENST00000400337 K7EM74 188 aa14.55□□□□□ -0.08
COL18A1-204ENST00000400337 NPC2P61916 151 aa14.55□□□□□ -0.08
COL18A1-204ENST00000400337 MORN3Q6PF18 240 aaPredicted RBP14.55□□□□□ -0.08
COL18A1-204ENST00000400337 BCL6BQ8N143 479 aaPredicted RBP14.55□□□□□ -0.08
COL18A1-204ENST00000400337 RNF166Q96A37 237 aaPredicted RBP14.55□□□□□ -0.08
COL18A1-204ENST00000400337 TMEM213A2RRL7 107 aa14.55□□□□□ -0.08
COL18A1-204ENST00000400337 HAPLN4Q86UW8 402 aa14.55□□□□□ -0.08
COL18A1-204ENST00000400337 DKK1O94907 266 aa14.55□□□□□ -0.08
COL18A1-204ENST00000400337 C1QTNF4Q9BXJ3 329 aa14.55□□□□□ -0.08
COL18A1-204ENST00000400337 MALRD1Q5VYJ5 2156 aa14.54□□□□□ -0.08
COL18A1-204ENST00000400337 GGTLC3B5MD39 225 aa14.54□□□□□ -0.08
COL18A1-204ENST00000400337 Q96MF0 132 aa14.54□□□□□ -0.08
COL18A1-204ENST00000400337 C1orf159Q96HA4 380 aa14.54□□□□□ -0.08
COL18A1-204ENST00000400337 SLC25A20O43772 301 aa14.54□□□□□ -0.08
COL18A1-204ENST00000400337 ERG28Q9UKR5 140 aa14.54□□□□□ -0.08
COL18A1-204ENST00000400337 PHLDA1Q8WV24 401 aaPredicted RBP14.53□□□□□ -0.08
COL18A1-204ENST00000400337 ZNF492Q9P255 531 aa14.53□□□□□ -0.08
COL18A1-204ENST00000400337 PFN1P07737 140 aaKnown RBP14.53□□□□□ -0.08
COL18A1-204ENST00000400337 TMEM86BQ8N661 226 aa14.53□□□□□ -0.08
COL18A1-204ENST00000400337 SPOCK3Q9BQ16 436 aa14.53□□□□□ -0.08
COL18A1-204ENST00000400337 A0A087X0K7 114 aa14.53□□□□□ -0.08
COL18A1-204ENST00000400337 TMEM238C9JI98 176 aa14.53□□□□□ -0.08
COL18A1-204ENST00000400337 TNFRSF6BO95407 300 aa14.53□□□□□ -0.08
COL18A1-204ENST00000400337 ZC2HC1BQ5TFG8 222 aa14.53□□□□□ -0.08
COL18A1-204ENST00000400337 VGLL1Q99990 258 aa14.53□□□□□ -0.08
COL18A1-204ENST00000400337 A8MWV9 139 aa14.52□□□□□ -0.09
COL18A1-204ENST00000400337 M0R2P5 195 aa14.52□□□□□ -0.09
COL18A1-204ENST00000400337 CKS1BP61024 79 aa14.52□□□□□ -0.09
COL18A1-204ENST00000400337 A0A1B0GUS0 222 aa14.52□□□□□ -0.09
COL18A1-204ENST00000400337 GAGE13Q4V321 117 aa14.52□□□□□ -0.09
COL18A1-204ENST00000400337 SPINK13Q1W4C9 94 aa14.52□□□□□ -0.09
COL18A1-204ENST00000400337 RNF114Q9Y508 228 aa14.52□□□□□ -0.09
COL18A1-204ENST00000400337 ZGRF1Q86YA3 2104 aa14.51□□□□□ -0.09
COL18A1-204ENST00000400337 GRNP28799 593 aaKnown RBP14.51□□□□□ -0.09
COL18A1-204ENST00000400337 PLEKHB2Q96CS7 222 aa14.51□□□□□ -0.09
COL18A1-204ENST00000400337 KAAG1Q9UBP8 84 aa14.51□□□□□ -0.09
COL18A1-204ENST00000400337 MPV17L2Q567V2 206 aa14.51□□□□□ -0.09
COL18A1-204ENST00000400337 C11orf53Q8IXP5 236 aa14.51□□□□□ -0.09
COL18A1-204ENST00000400337 DEFB130BP0DP73 79 aa14.51□□□□□ -0.09
COL18A1-204ENST00000400337 DEFB130AP0DP74 79 aa14.51□□□□□ -0.09
COL18A1-204ENST00000400337 CR1LQ2VPA4 569 aa14.51□□□□□ -0.09
COL18A1-204ENST00000400337 ZNF664Q8N3J9 261 aa14.51□□□□□ -0.09
COL18A1-204ENST00000400337 XCL2Q9UBD3 114 aa14.51□□□□□ -0.09
COL18A1-204ENST00000400337 KNCNA6PVL3 124 aa14.5□□□□□ -0.09
COL18A1-204ENST00000400337 DOCK11Q5JSL3 2073 aa14.5□□□□□ -0.09
COL18A1-204ENST00000400337 C8orf86Q6ZUL3 223 aa14.5□□□□□ -0.09
COL18A1-204ENST00000400337 SHISA9B4DS77 424 aa14.5□□□□□ -0.09
COL18A1-204ENST00000400337 NDUFS7O75251 213 aa14.5□□□□□ -0.09
COL18A1-204ENST00000400337 DEFB121Q5J5C9 76 aa14.5□□□□□ -0.09
COL18A1-204ENST00000400337 RNF138Q8WVD3 245 aa14.5□□□□□ -0.09
COL18A1-204ENST00000400337 Q8NFD4 153 aa14.49□□□□□ -0.09
COL18A1-204ENST00000400337 TRAV13-1A0A0B4J241 112 aa14.49□□□□□ -0.09
COL18A1-204ENST00000400337 C22orf46C9J442 243 aa14.49□□□□□ -0.09
COL18A1-204ENST00000400337 LINC01619G3V211 115 aa14.49□□□□□ -0.09
COL18A1-204ENST00000400337 H3BRN7 92 aa14.49□□□□□ -0.09
COL18A1-204ENST00000400337 SLX1AQ9BQ83 275 aa14.49□□□□□ -0.09
COL18A1-204ENST00000400337 Q0VG73 95 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms