RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 CYYR1Q96J86 154 aa2.64□□□□□ -1.99
KNL1-202ENST00000399668 PEF1Q9UBV8 284 aaKnown RBP2.64□□□□□ -1.99
KNL1-202ENST00000399668 A0A087X0K7 114 aa2.64□□□□□ -1.99
KNL1-202ENST00000399668 A0A1B0GUS0 222 aa2.64□□□□□ -1.99
KNL1-202ENST00000399668 TMEM8BA6NDV4 472 aa2.64□□□□□ -1.99
KNL1-202ENST00000399668 DPM2O94777 84 aa2.64□□□□□ -1.99
KNL1-202ENST00000399668 CACNG7P62955 275 aa2.64□□□□□ -1.99
KNL1-202ENST00000399668 C3orf36Q3SXR2 165 aa2.64□□□□□ -1.99
KNL1-202ENST00000399668 RNF182Q8N6D2 247 aa2.64□□□□□ -1.99
KNL1-202ENST00000399668 VOPP1Q96AW1 172 aa2.64□□□□□ -1.99
KNL1-202ENST00000399668 ST20Q9HBF5 79 aa2.64□□□□□ -1.99
KNL1-202ENST00000399668 PEMTQ9UBM1 199 aa2.64□□□□□ -1.99
KNL1-202ENST00000399668 MMP23AO75900 390 aa2.64□□□□□ -1.99
KNL1-202ENST00000399668 PAX1P15863 534 aa2.64□□□□□ -1.99
KNL1-202ENST00000399668 SRSF1Q07955 248 aaKnown RBP eCLIP2.64□□□□□ -1.99
KNL1-202ENST00000399668 ERCC8Q13216 396 aa2.64□□□□□ -1.99
KNL1-202ENST00000399668 RUSC1-AS1Q66K80 236 aa2.64□□□□□ -1.99
KNL1-202ENST00000399668 Q71RC1 249 aaPredicted RBP2.64□□□□□ -1.99
KNL1-202ENST00000399668 TSKUQ8WUA8 353 aa2.64□□□□□ -1.99
KNL1-202ENST00000399668 TRAV9-1A0A075B6T8 112 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 TRAV41A0A0B4J266 112 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 A0A1B0GV72 72 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 IGHV4-39P01824 125 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 TCRAP04437 139 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 LYL1P12980 280 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 ADCYAP1P18509 176 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 MINOS1Q5TGZ0 78 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 HIST3H2BBQ8N257 126 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 PIP4P2Q8N4L2 257 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 IGFBPL1Q8WX77 278 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 COPS9Q8WXC6 57 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 UBE2E2Q96LR5 201 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 TMEM242Q9NWH2 141 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 MINOS1-NBL1R4GNA1 71 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 TRAV1-1A0A0B4J248 108 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 TRGV4A0A0C4DH28 118 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 RNASE2P10153 161 aaKnown RBP2.63□□□□□ -1.99
KNL1-202ENST00000399668 IFI27P40305 119 aaPredicted RBP2.63□□□□□ -1.99
KNL1-202ENST00000399668 EFNA4P52798 201 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 LAGE3Q14657 143 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 SAMD13Q5VXD3 122 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 NXT2Q9NPJ8 142 aaKnown RBP2.63□□□□□ -1.99
KNL1-202ENST00000399668 NHP2Q9NX24 153 aaKnown RBP2.63□□□□□ -1.99
KNL1-202ENST00000399668 TRBV6-6A0A0A6YYG2 114 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 TNFSF13O75888 250 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 PAPPA-AS1Q5QFB9 102 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 AMN1Q8IY45 258 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 PRDM13Q9H4Q3 707 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 SOX21Q9Y651 276 aaPredicted RBP2.63□□□□□ -1.99
KNL1-202ENST00000399668 CELSR1Q9NYQ6 3014 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 TRAV2A0A0B4J234 112 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 M0R1W7 72 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 HBDP02042 147 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 STAG3L3P0CL85 134 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 C17orf58Q2M2W7 97 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 Q6ZR03 302 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 SLC50A1Q9BRV3 221 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 LAMTOR2Q9Y2Q5 125 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 TRBV7-9A0A0J9YWB2 115 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 A0A1B0GWJ7 208 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 IGHG3P01860 377 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 PAX9P55771 341 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 PSG3Q16557 428 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 LYZL1Q6UWQ5 148 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 NBPF19A0A087WUL8 3843 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 C19orf67A6NJJ6 358 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 RNF223E7ERA6 249 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.63□□□□□ -1.99
KNL1-202ENST00000399668 CFHR2P36980 270 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 BEND2Q8NDZ0 799 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 CHCHD1Q96BP2 118 aaKnown RBP2.63□□□□□ -1.99
KNL1-202ENST00000399668 C8orf49Q96NF6 230 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 TPSG1Q9NRR2 321 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 CSMD2Q7Z408 3487 aa2.63□□□□□ -1.99
KNL1-202ENST00000399668 ATRQ13535 2644 aa2.62□□□□□ -1.99
KNL1-202ENST00000399668 TRBV24-1A0A075B6N3 115 aa2.62□□□□□ -1.99
KNL1-202ENST00000399668 SH2D1AO60880 128 aa2.62□□□□□ -1.99
KNL1-202ENST00000399668 CYSLTR1Q9Y271 337 aa2.62□□□□□ -1.99
KNL1-202ENST00000399668 SPCS1Q9Y6A9 102 aa2.62□□□□□ -1.99
KNL1-202ENST00000399668 A0A087WWL8 130 aa2.62□□□□□ -1.99
KNL1-202ENST00000399668 A6NNC1 897 aa2.62□□□□□ -1.99
KNL1-202ENST00000399668 B4DSR2 109 aa2.62□□□□□ -1.99
KNL1-202ENST00000399668 E9PQ18 207 aa2.62□□□□□ -1.99
KNL1-202ENST00000399668 G3V318 75 aa2.62□□□□□ -1.99
KNL1-202ENST00000399668 IGHV3-53P01767 116 aa2.62□□□□□ -1.99
KNL1-202ENST00000399668 LMO1P25800 156 aa2.62□□□□□ -1.99
KNL1-202ENST00000399668 ZNF134P52741 427 aa2.62□□□□□ -1.99
KNL1-202ENST00000399668 Q6ZS49 121 aa2.62□□□□□ -1.99
KNL1-202ENST00000399668 IL17RELQ6ZVW7 336 aa2.62□□□□□ -1.99
KNL1-202ENST00000399668 C14orf178Q8N769 122 aaPredicted RBP2.62□□□□□ -1.99
KNL1-202ENST00000399668 CHTOPQ9Y3Y2 248 aaKnown RBP2.62□□□□□ -1.99
KNL1-202ENST00000399668 FLNAP21333 2647 aaKnown RBP2.62□□□□□ -1.99
KNL1-202ENST00000399668 SVEP1Q4LDE5 3571 aa2.62□□□□□ -1.99
KNL1-202ENST00000399668 SAP30O75446 220 aa2.62□□□□□ -1.99
KNL1-202ENST00000399668 IGKCP01834 107 aa2.62□□□□□ -1.99
KNL1-202ENST00000399668 SYNJ2BPP57105 145 aa2.62□□□□□ -1.99
KNL1-202ENST00000399668 PLA2G2CQ5R387 149 aa2.62□□□□□ -1.99
KNL1-202ENST00000399668 SPSB3Q6PJ21 355 aa2.62□□□□□ -1.99
KNL1-202ENST00000399668 MEGF9Q9H1U4 602 aa2.62□□□□□ -1.99
KNL1-202ENST00000399668 FLNBO75369 2602 aaKnown RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms