RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 TCF21O43680 179 aa11.33□□□□□ -0.6
CCDC144A-205ENST00000399264 MFAP4P55083 255 aa11.33□□□□□ -0.6
CCDC144A-205ENST00000399264 ZNF562Q6V9R5 426 aa11.33□□□□□ -0.6
CCDC144A-205ENST00000399264 CENPEQ02224 2701 aa11.33□□□□□ -0.6
CCDC144A-205ENST00000399264 CRXO43186 299 aaPredicted RBP11.33□□□□□ -0.6
CCDC144A-205ENST00000399264 CTSGP08311 255 aa11.33□□□□□ -0.6
CCDC144A-205ENST00000399264 IFI27P40305 119 aaPredicted RBP11.33□□□□□ -0.6
CCDC144A-205ENST00000399264 FBXL19-AS1Q494R0 122 aa11.33□□□□□ -0.6
CCDC144A-205ENST00000399264 AMN1Q8IY45 258 aa11.33□□□□□ -0.6
CCDC144A-205ENST00000399264 TIMD4Q96H15 378 aa11.33□□□□□ -0.6
CCDC144A-205ENST00000399264 LINC01548A6NM66 108 aa11.32□□□□□ -0.6
CCDC144A-205ENST00000399264 NPIPB5A8MRT5 1133 aa11.32□□□□□ -0.6
CCDC144A-205ENST00000399264 SMKR1H3BMG3 65 aa11.32□□□□□ -0.6
CCDC144A-205ENST00000399264 SH2D1AO60880 128 aa11.32□□□□□ -0.6
CCDC144A-205ENST00000399264 IGHG4P01861 327 aa11.32□□□□□ -0.6
CCDC144A-205ENST00000399264 C11orf71Q6IPW1 123 aa11.32□□□□□ -0.6
CCDC144A-205ENST00000399264 CEACAM3P40198 252 aa11.32□□□□□ -0.6
CCDC144A-205ENST00000399264 MPV17L2Q567V2 206 aa11.32□□□□□ -0.6
CCDC144A-205ENST00000399264 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.32□□□□□ -0.6
CCDC144A-205ENST00000399264 D6R8Y8 96 aa11.31□□□□□ -0.6
CCDC144A-205ENST00000399264 ZNF575Q86XF7 245 aa11.31□□□□□ -0.6
CCDC144A-205ENST00000399264 SRSF8Q9BRL6 282 aaKnown RBP11.31□□□□□ -0.6
CCDC144A-205ENST00000399264 MRPS16Q9Y3D3 137 aaKnown RBP11.31□□□□□ -0.6
CCDC144A-205ENST00000399264 IGHV7-81A0A0B4J1V7 117 aa11.31□□□□□ -0.6
CCDC144A-205ENST00000399264 K7EQM0 130 aa11.31□□□□□ -0.6
CCDC144A-205ENST00000399264 GAGE1Q13065 139 aa11.31□□□□□ -0.6
CCDC144A-205ENST00000399264 MSRB1Q9NZV6 116 aa11.31□□□□□ -0.6
CCDC144A-205ENST00000399264 IGHV3-49A0A0A0MS15 119 aa11.31□□□□□ -0.6
CCDC144A-205ENST00000399264 CCL25O15444 150 aa11.31□□□□□ -0.6
CCDC144A-205ENST00000399264 RIGQ13278 110 aa11.31□□□□□ -0.6
CCDC144A-205ENST00000399264 AAMDCQ9H7C9 122 aa11.31□□□□□ -0.6
CCDC144A-205ENST00000399264 MSRB2Q9Y3D2 182 aa11.31□□□□□ -0.6
CCDC144A-205ENST00000399264 A0A096LNJ9 63 aa11.3□□□□□ -0.6
CCDC144A-205ENST00000399264 PRAC2D3DTV9 90 aa11.3□□□□□ -0.6
CCDC144A-205ENST00000399264 GAS8-AS1O95177 125 aa11.3□□□□□ -0.6
CCDC144A-205ENST00000399264 TMEM11P17152 192 aa11.3□□□□□ -0.6
CCDC144A-205ENST00000399264 RELQ04864 619 aaPredicted RBP11.3□□□□□ -0.6
CCDC144A-205ENST00000399264 ERCC8Q13216 396 aa11.3□□□□□ -0.6
CCDC144A-205ENST00000399264 RNF182Q8N6D2 247 aa11.3□□□□□ -0.6
CCDC144A-205ENST00000399264 PRSS3P2Q8NHM4 247 aa11.3□□□□□ -0.6
CCDC144A-205ENST00000399264 AP5S1Q9NUS5 200 aa11.3□□□□□ -0.6
CCDC144A-205ENST00000399264 ABCA2Q9BZC7 2435 aa11.3□□□□□ -0.6
CCDC144A-205ENST00000399264 TRBV6-1A0A0K0K1D8 114 aa11.3□□□□□ -0.6
CCDC144A-205ENST00000399264 CT45A10P0DMU9 189 aa11.3□□□□□ -0.6
CCDC144A-205ENST00000399264 ECSCRQ19T08 205 aa11.3□□□□□ -0.6
CCDC144A-205ENST00000399264 TTC9CQ8N5M4 171 aa11.3□□□□□ -0.6
CCDC144A-205ENST00000399264 TMEM189A5PLL7 270 aa11.29□□□□□ -0.6
CCDC144A-205ENST00000399264 M0R1W7 72 aa11.29□□□□□ -0.6
CCDC144A-205ENST00000399264 GPR183P32249 361 aa11.29□□□□□ -0.6
CCDC144A-205ENST00000399264 LYPD1Q8N2G4 141 aa11.29□□□□□ -0.6
CCDC144A-205ENST00000399264 Q8N6K4 173 aa11.29□□□□□ -0.6
CCDC144A-205ENST00000399264 MAP1LC3CQ9BXW4 147 aa11.29□□□□□ -0.6
CCDC144A-205ENST00000399264 G3V318 75 aa11.29□□□□□ -0.6
CCDC144A-205ENST00000399264 OR5AL1P0C617 328 aa11.29□□□□□ -0.6
CCDC144A-205ENST00000399264 PPIFP30405 207 aaKnown RBP11.29□□□□□ -0.6
CCDC144A-205ENST00000399264 PRR25Q96S07 402 aa11.29□□□□□ -0.6
CCDC144A-205ENST00000399264 ZNF207O43670 478 aaKnown RBP11.28□□□□□ -0.6
CCDC144A-205ENST00000399264 NUDT3O95989 172 aa11.28□□□□□ -0.6
CCDC144A-205ENST00000399264 FOSL1P15407 271 aa11.28□□□□□ -0.6
CCDC144A-205ENST00000399264 WFDC3Q8IUB2 231 aa11.28□□□□□ -0.6
CCDC144A-205ENST00000399264 PIP4P2Q8N4L2 257 aa11.28□□□□□ -0.6
CCDC144A-205ENST00000399264 CSPG4Q6UVK1 2322 aa11.28□□□□□ -0.6
CCDC144A-205ENST00000399264 Q8N9W7 124 aa11.28□□□□□ -0.6
CCDC144A-205ENST00000399264 OR8A1Q8NGG7 326 aa11.28□□□□□ -0.6
CCDC144A-205ENST00000399264 ZNF747Q9BV97 191 aa11.28□□□□□ -0.6
CCDC144A-205ENST00000399264 SIGLEC8Q9NYZ4 499 aa11.28□□□□□ -0.6
CCDC144A-205ENST00000399264 RNF24Q9Y225 148 aa11.28□□□□□ -0.6
CCDC144A-205ENST00000399264 ZANQ9Y493 2812 aa11.27□□□□□ -0.6
CCDC144A-205ENST00000399264 A0A087X0K7 114 aa11.27□□□□□ -0.6
CCDC144A-205ENST00000399264 C15orf32Q32M92 178 aa11.27□□□□□ -0.6
CCDC144A-205ENST00000399264 Q6ZQT7 251 aa11.27□□□□□ -0.6
CCDC144A-205ENST00000399264 AJUBAQ96IF1 538 aa11.27□□□□□ -0.6
CCDC144A-205ENST00000399264 TRAV30A0A087WSZ9 112 aa11.27□□□□□ -0.61
CCDC144A-205ENST00000399264 CLEC3BP05452 202 aa11.27□□□□□ -0.61
CCDC144A-205ENST00000399264 CSN1S1P47710 185 aa11.27□□□□□ -0.61
CCDC144A-205ENST00000399264 FAM162BQ5T6X4 162 aa11.27□□□□□ -0.61
CCDC144A-205ENST00000399264 FA2HQ7L5A8 372 aa11.27□□□□□ -0.61
CCDC144A-205ENST00000399264 MRPL51Q4U2R6 128 aaKnown RBP11.27□□□□□ -0.61
CCDC144A-205ENST00000399264 TMEM191AQ9H0A3 160 aa11.27□□□□□ -0.61
CCDC144A-205ENST00000399264 LINC00527Q9UJ94 153 aa11.27□□□□□ -0.61
CCDC144A-205ENST00000399264 IGHV3OR16-10A0A075B7F0 116 aa11.26□□□□□ -0.61
CCDC144A-205ENST00000399264 ATP6V0E1O15342 81 aa11.26□□□□□ -0.61
CCDC144A-205ENST00000399264 PDE6HQ13956 83 aa11.26□□□□□ -0.61
CCDC144A-205ENST00000399264 TWIST1Q15672 202 aa11.26□□□□□ -0.61
CCDC144A-205ENST00000399264 FAM104BQ5XKR9 115 aa11.26□□□□□ -0.61
CCDC144A-205ENST00000399264 PRELID3AQ96N28 172 aa11.26□□□□□ -0.61
CCDC144A-205ENST00000399264 ST20Q9HBF5 79 aa11.26□□□□□ -0.61
CCDC144A-205ENST00000399264 SCRT2Q9NQ03 307 aa11.26□□□□□ -0.61
CCDC144A-205ENST00000399264 RABAC1Q9UI14 185 aa11.26□□□□□ -0.61
CCDC144A-205ENST00000399264 COX11Q9Y6N1 276 aa11.26□□□□□ -0.61
CCDC144A-205ENST00000399264 PKD1L2Q7Z442 2459 aa11.25□□□□□ -0.61
CCDC144A-205ENST00000399264 PTTG1IPP53801 180 aa11.25□□□□□ -0.61
CCDC144A-205ENST00000399264 LY6DQ14210 128 aa11.25□□□□□ -0.61
CCDC144A-205ENST00000399264 SIRPDQ9H106 197 aa11.25□□□□□ -0.61
CCDC144A-205ENST00000399264 C20orf202A1L168 122 aa11.25□□□□□ -0.61
CCDC144A-205ENST00000399264 NPYP01303 97 aa11.25□□□□□ -0.61
CCDC144A-205ENST00000399264 ORM1P02763 201 aa11.25□□□□□ -0.61
CCDC144A-205ENST00000399264 RPL7P18124 248 aaKnown RBP11.25□□□□□ -0.61
CCDC144A-205ENST00000399264 KLRB1Q12918 225 aa11.25□□□□□ -0.61
CCDC144A-205ENST00000399264 LINC01545Q5VT33 79 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms