RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 C1orf185Q5T7R7 199 aa11□□□□□ -0.65
APOB-202ENST00000399256 PKDREJQ9NTG1 2253 aa11□□□□□ -0.65
APOB-202ENST00000399256 FABP2P12104 132 aa11□□□□□ -0.65
APOB-202ENST00000399256 RPL24P83731 157 aaKnown RBP11□□□□□ -0.65
APOB-202ENST00000399256 OR5A1Q8NGJ0 315 aa11□□□□□ -0.65
APOB-202ENST00000399256 DMXL2Q8TDJ6 3036 aa10.99□□□□□ -0.65
APOB-202ENST00000399256 MALRD1Q5VYJ5 2156 aa10.99□□□□□ -0.65
APOB-202ENST00000399256 TWIST1Q15672 202 aa10.99□□□□□ -0.65
APOB-202ENST00000399256 SAMD5Q5TGI4 173 aa10.99□□□□□ -0.65
APOB-202ENST00000399256 NUP37Q8NFH4 326 aa10.99□□□□□ -0.65
APOB-202ENST00000399256 LAMA5O15230 3695 aa10.99□□□□□ -0.65
APOB-202ENST00000399256 IGHV1-3A0A0C4DH29 117 aa10.99□□□□□ -0.65
APOB-202ENST00000399256 K7ERJ3 54 aa10.99□□□□□ -0.65
APOB-202ENST00000399256 TMEM108Q6UXF1 575 aa10.99□□□□□ -0.65
APOB-202ENST00000399256 RNF125Q96EQ8 232 aa10.99□□□□□ -0.65
APOB-202ENST00000399256 IGKV2-40A0A087WW87 121 aaPredicted RBP10.98□□□□□ -0.65
APOB-202ENST00000399256 IGKV2D-26A0A0A0MRZ7 120 aa10.98□□□□□ -0.65
APOB-202ENST00000399256 GOSR1O95249 250 aa10.98□□□□□ -0.65
APOB-202ENST00000399256 IGKV2D-40P01614 121 aaPredicted RBP10.98□□□□□ -0.65
APOB-202ENST00000399256 FXYD2P54710 66 aa10.98□□□□□ -0.65
APOB-202ENST00000399256 ZNF491Q8N8L2 437 aa10.98□□□□□ -0.65
APOB-202ENST00000399256 ZZEF1O43149 2961 aa10.98□□□□□ -0.65
APOB-202ENST00000399256 K7EIM0 57 aa10.98□□□□□ -0.65
APOB-202ENST00000399256 CEACAM4O75871 244 aa10.98□□□□□ -0.65
APOB-202ENST00000399256 CNIH1O95406 144 aa10.98□□□□□ -0.65
APOB-202ENST00000399256 SMIM13P0DJ93 91 aa10.98□□□□□ -0.65
APOB-202ENST00000399256 K7EM74 188 aa10.98□□□□□ -0.65
APOB-202ENST00000399256 TNFRSF13BO14836 293 aaPredicted RBP10.98□□□□□ -0.65
APOB-202ENST00000399256 MRPS12O15235 138 aaKnown RBP10.98□□□□□ -0.65
APOB-202ENST00000399256 COX7A1P24310 79 aa10.98□□□□□ -0.65
APOB-202ENST00000399256 LYPD1Q8N2G4 141 aa10.98□□□□□ -0.65
APOB-202ENST00000399256 WI2-2373I1.2A0A1W2PRP0 233 aa10.97□□□□□ -0.65
APOB-202ENST00000399256 K7EMI3 77 aa10.97□□□□□ -0.65
APOB-202ENST00000399256 GAS8-AS1O95177 125 aa10.97□□□□□ -0.65
APOB-202ENST00000399256 BSPH1Q075Z2 132 aa10.97□□□□□ -0.65
APOB-202ENST00000399256 KLF17Q5JT82 389 aaPredicted RBP10.97□□□□□ -0.65
APOB-202ENST00000399256 AAMDCQ9H7C9 122 aa10.97□□□□□ -0.65
APOB-202ENST00000399256 FBLL1A6NHQ2 334 aaKnown RBP10.97□□□□□ -0.65
APOB-202ENST00000399256 Q8TAT8 98 aa10.97□□□□□ -0.65
APOB-202ENST00000399256 MSRB2Q9Y3D2 182 aa10.97□□□□□ -0.65
APOB-202ENST00000399256 TEX48A0A1B0GUV7 120 aa10.96□□□□□ -0.65
APOB-202ENST00000399256 EGR2P11161 476 aaPredicted RBP10.96□□□□□ -0.65
APOB-202ENST00000399256 MSRB1Q9NZV6 116 aa10.96□□□□□ -0.65
APOB-202ENST00000399256 GNG7O60262 68 aa10.96□□□□□ -0.66
APOB-202ENST00000399256 IGFBPL1Q8WX77 278 aa10.96□□□□□ -0.66
APOB-202ENST00000399256 APC2O95996 2303 aa10.95□□□□□ -0.66
APOB-202ENST00000399256 CEP295Q9C0D2 2601 aa10.95□□□□□ -0.66
APOB-202ENST00000399256 BUB1B-PAK6H3BSN5 160 aa10.95□□□□□ -0.66
APOB-202ENST00000399256 LEPP41159 167 aa10.95□□□□□ -0.66
APOB-202ENST00000399256 IGFL4Q6B9Z1 124 aa10.95□□□□□ -0.66
APOB-202ENST00000399256 NPIPB5A8MRT5 1133 aa10.95□□□□□ -0.66
APOB-202ENST00000399256 IGLV1-47P01700 117 aa10.95□□□□□ -0.66
APOB-202ENST00000399256 EVI2AP22794 236 aa10.95□□□□□ -0.66
APOB-202ENST00000399256 ZNF80P51504 273 aaPredicted RBP10.95□□□□□ -0.66
APOB-202ENST00000399256 CHAC1Q9BUX1 264 aa10.95□□□□□ -0.66
APOB-202ENST00000399256 PPIAL4CA0A0B4J2A2 164 aa10.94□□□□□ -0.66
APOB-202ENST00000399256 PPIAL4GP0DN37 164 aa10.94□□□□□ -0.66
APOB-202ENST00000399256 SAMD13Q5VXD3 122 aa10.94□□□□□ -0.66
APOB-202ENST00000399256 RPEQ96AT9 228 aa10.94□□□□□ -0.66
APOB-202ENST00000399256 PRSS1P07477 247 aa10.94□□□□□ -0.66
APOB-202ENST00000399256 GTSCR1Q86UQ5 136 aa10.94□□□□□ -0.66
APOB-202ENST00000399256 SPTBN4Q9H254 2564 aa10.94□□□□□ -0.66
APOB-202ENST00000399256 ODF1Q14990 250 aa10.93□□□□□ -0.66
APOB-202ENST00000399256 MAP1LC3AQ9H492 121 aa10.93□□□□□ -0.66
APOB-202ENST00000399256 NHP2Q9NX24 153 aaKnown RBP10.93□□□□□ -0.66
APOB-202ENST00000399256 PRR25Q96S07 402 aa10.93□□□□□ -0.66
APOB-202ENST00000399256 DYNLRB1Q9NP97 96 aa10.93□□□□□ -0.66
APOB-202ENST00000399256 MAP1BP46821 2468 aaKnown RBP10.93□□□□□ -0.66
APOB-202ENST00000399256 SMIM17P0DL12 118 aa10.93□□□□□ -0.66
APOB-202ENST00000399256 TMEM11P17152 192 aa10.93□□□□□ -0.66
APOB-202ENST00000399256 ZNF562Q6V9R5 426 aa10.93□□□□□ -0.66
APOB-202ENST00000399256 RNF185Q96GF1 192 aa10.93□□□□□ -0.66
APOB-202ENST00000399256 GTSF1LQ9H1H1 148 aa10.93□□□□□ -0.66
APOB-202ENST00000399256 HHLA3Q9XRX5 114 aa10.93□□□□□ -0.66
APOB-202ENST00000399256 ZNF207O43670 478 aaKnown RBP10.92□□□□□ -0.66
APOB-202ENST00000399256 GATA1P15976 413 aaPredicted RBP10.92□□□□□ -0.66
APOB-202ENST00000399256 CLEC2AQ6UVW9 174 aa10.92□□□□□ -0.66
APOB-202ENST00000399256 FOXC2Q99958 501 aa10.92□□□□□ -0.66
APOB-202ENST00000399256 VGLL1Q99990 258 aa10.92□□□□□ -0.66
APOB-202ENST00000399256 ACACAQ13085 2346 aa10.92□□□□□ -0.66
APOB-202ENST00000399256 C16orf97H3BN30 126 aa10.92□□□□□ -0.66
APOB-202ENST00000399256 HLA-DMBP28068 263 aa10.92□□□□□ -0.66
APOB-202ENST00000399256 GFRALQ6UXV0 394 aa10.92□□□□□ -0.66
APOB-202ENST00000399256 KAAG1Q9UBP8 84 aa10.92□□□□□ -0.66
APOB-202ENST00000399256 IGHV3-23P01764 117 aa10.91□□□□□ -0.66
APOB-202ENST00000399256 ORM1P02763 201 aa10.91□□□□□ -0.66
APOB-202ENST00000399256 THBDP07204 575 aa10.91□□□□□ -0.66
APOB-202ENST00000399256 RNASE6Q93091 150 aaKnown RBP10.91□□□□□ -0.66
APOB-202ENST00000399256 TACC2O95359 2948 aa10.91□□□□□ -0.66
APOB-202ENST00000399256 MGAQ8IWI9 3026 aa10.91□□□□□ -0.66
APOB-202ENST00000399256 TRBV25-1A0A075B6N4 114 aa10.91□□□□□ -0.66
APOB-202ENST00000399256 LYNX1G3V0Z9 82 aa10.91□□□□□ -0.66
APOB-202ENST00000399256 IGKCP01834 107 aa10.91□□□□□ -0.66
APOB-202ENST00000399256 LYNX1P0DP58 116 aa10.91□□□□□ -0.66
APOB-202ENST00000399256 PPIFP30405 207 aaKnown RBP10.91□□□□□ -0.66
APOB-202ENST00000399256 PDE6HQ13956 83 aa10.91□□□□□ -0.66
APOB-202ENST00000399256 TNFRSF14Q92956 283 aa10.91□□□□□ -0.66
APOB-202ENST00000399256 SH3BGRL2Q9UJC5 107 aa10.91□□□□□ -0.66
APOB-202ENST00000399256 IGLC6P0CF74 106 aa10.91□□□□□ -0.66
APOB-202ENST00000399256 AZU1P20160 251 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms