RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 C1orf159Q96HA4 380 aa13.04□□□□□ -0.32
PCDHA12-201ENST00000398631 PLEKHB2Q96CS7 222 aa13.03□□□□□ -0.32
PCDHA12-201ENST00000398631 FNDC4Q9H6D8 234 aaPredicted RBP13.03□□□□□ -0.32
PCDHA12-201ENST00000398631 TMEM238C9JI98 176 aa13.03□□□□□ -0.32
PCDHA12-201ENST00000398631 LINC01619G3V211 115 aa13.03□□□□□ -0.32
PCDHA12-201ENST00000398631 CSTL1Q9H114 145 aa13.03□□□□□ -0.32
PCDHA12-201ENST00000398631 MEGF9Q9H1U4 602 aa13.03□□□□□ -0.32
PCDHA12-201ENST00000398631 HOXA3O43365 443 aaPredicted RBP13.03□□□□□ -0.32
PCDHA12-201ENST00000398631 DEFB130BP0DP73 79 aa13.03□□□□□ -0.32
PCDHA12-201ENST00000398631 DEFB130AP0DP74 79 aa13.03□□□□□ -0.32
PCDHA12-201ENST00000398631 RSPO1Q2MKA7 263 aaPredicted RBP13.03□□□□□ -0.32
PCDHA12-201ENST00000398631 ARMS2P0C7Q2 107 aa13.03□□□□□ -0.32
PCDHA12-201ENST00000398631 S100A7L2Q5SY68 101 aa13.03□□□□□ -0.32
PCDHA12-201ENST00000398631 RSPO3Q9BXY4 272 aaPredicted RBP13.03□□□□□ -0.32
PCDHA12-201ENST00000398631 ANAPC10Q9UM13 185 aa13.02□□□□□ -0.32
PCDHA12-201ENST00000398631 TRAV8-2A0A0B4J237 113 aa13.02□□□□□ -0.33
PCDHA12-201ENST00000398631 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.02□□□□□ -0.33
PCDHA12-201ENST00000398631 ERCC8Q13216 396 aa13.02□□□□□ -0.33
PCDHA12-201ENST00000398631 PRR31Q5SQ13 230 aa13.02□□□□□ -0.33
PCDHA12-201ENST00000398631 RASL10AQ92737 203 aa13.02□□□□□ -0.33
PCDHA12-201ENST00000398631 LIME1Q9H400 295 aa13.02□□□□□ -0.33
PCDHA12-201ENST00000398631 LINC00479Q96M42 142 aa13.01□□□□□ -0.33
PCDHA12-201ENST00000398631 JPT2Q9H910 190 aa13.01□□□□□ -0.33
PCDHA12-201ENST00000398631 ZNF479Q96JC4 524 aa13.01□□□□□ -0.33
PCDHA12-201ENST00000398631 NOTCH4Q99466 2003 aa13.01□□□□□ -0.33
PCDHA12-201ENST00000398631 DEFB104AQ8WTQ1 72 aa13.01□□□□□ -0.33
PCDHA12-201ENST00000398631 A0A087WWL8 130 aa13.01□□□□□ -0.33
PCDHA12-201ENST00000398631 IL17RELQ6ZVW7 336 aa13.01□□□□□ -0.33
PCDHA12-201ENST00000398631 KAAG1Q9UBP8 84 aa13.01□□□□□ -0.33
PCDHA12-201ENST00000398631 AMN1Q8IY45 258 aa13□□□□□ -0.33
PCDHA12-201ENST00000398631 MRPL27Q9P0M9 148 aaKnown RBP13□□□□□ -0.33
PCDHA12-201ENST00000398631 IGHV4-39P01824 125 aa13□□□□□ -0.33
PCDHA12-201ENST00000398631 PLXNA4Q9HCM2 1894 aa13□□□□□ -0.33
PCDHA12-201ENST00000398631 SLX1AQ9BQ83 275 aa13□□□□□ -0.33
PCDHA12-201ENST00000398631 TDGF1P3P51864 188 aa13□□□□□ -0.33
PCDHA12-201ENST00000398631 FAM90A2PQ658T7 463 aa13□□□□□ -0.33
PCDHA12-201ENST00000398631 SIGMAR1Q99720 223 aa13□□□□□ -0.33
PCDHA12-201ENST00000398631 XCL2Q9UBD3 114 aa13□□□□□ -0.33
PCDHA12-201ENST00000398631 C15orf65H3BRN8 121 aa12.99□□□□□ -0.33
PCDHA12-201ENST00000398631 RHODO00212 210 aa12.99□□□□□ -0.33
PCDHA12-201ENST00000398631 GGTLC3B5MD39 225 aa12.99□□□□□ -0.33
PCDHA12-201ENST00000398631 PAX4O43316 350 aa12.99□□□□□ -0.33
PCDHA12-201ENST00000398631 C6orf226Q5I0X4 101 aa12.99□□□□□ -0.33
PCDHA12-201ENST00000398631 TMEM158Q8WZ71 300 aa12.99□□□□□ -0.33
PCDHA12-201ENST00000398631 M0R2P5 195 aa12.99□□□□□ -0.33
PCDHA12-201ENST00000398631 PYY3Q5JQD4 70 aa12.99□□□□□ -0.33
PCDHA12-201ENST00000398631 GFRA4Q9GZZ7 299 aa12.99□□□□□ -0.33
PCDHA12-201ENST00000398631 ERG28Q9UKR5 140 aa12.99□□□□□ -0.33
PCDHA12-201ENST00000398631 SAMD5Q5TGI4 173 aa12.98□□□□□ -0.33
PCDHA12-201ENST00000398631 C11orf68Q9H3H3 251 aaKnown RBP12.98□□□□□ -0.33
PCDHA12-201ENST00000398631 CST9LQ9H4G1 147 aa12.98□□□□□ -0.33
PCDHA12-201ENST00000398631 A8MWV9 139 aa12.98□□□□□ -0.33
PCDHA12-201ENST00000398631 DLEU1O43261 78 aa12.98□□□□□ -0.33
PCDHA12-201ENST00000398631 DMRTC2Q8IXT2 367 aaPredicted RBP12.98□□□□□ -0.33
PCDHA12-201ENST00000398631 WDR81Q562E7 1941 aa12.98□□□□□ -0.33
PCDHA12-201ENST00000398631 NDUFA4O00483 81 aa12.98□□□□□ -0.33
PCDHA12-201ENST00000398631 TRBV19A0A075B6N1 114 aa12.98□□□□□ -0.33
PCDHA12-201ENST00000398631 PSCAO43653 123 aa12.98□□□□□ -0.33
PCDHA12-201ENST00000398631 TMEM256Q8N2U0 113 aa12.98□□□□□ -0.33
PCDHA12-201ENST00000398631 TMEM75Q8N9X5 138 aa12.98□□□□□ -0.33
PCDHA12-201ENST00000398631 PHLDA1Q8WV24 401 aaPredicted RBP12.98□□□□□ -0.33
PCDHA12-201ENST00000398631 MMP23AO75900 390 aa12.97□□□□□ -0.33
PCDHA12-201ENST00000398631 SPINK13Q1W4C9 94 aa12.97□□□□□ -0.33
PCDHA12-201ENST00000398631 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.97□□□□□ -0.33
PCDHA12-201ENST00000398631 WT1P19544 449 aaPredicted RBP12.97□□□□□ -0.33
PCDHA12-201ENST00000398631 TMEM95Q3KNT9 176 aa12.97□□□□□ -0.33
PCDHA12-201ENST00000398631 DKK1O94907 266 aa12.97□□□□□ -0.33
PCDHA12-201ENST00000398631 WT1-ASQ06250 92 aa12.97□□□□□ -0.33
PCDHA12-201ENST00000398631 TCTEX1D4Q5JR98 221 aa12.97□□□□□ -0.33
PCDHA12-201ENST00000398631 TRAV13-1A0A0B4J241 112 aa12.97□□□□□ -0.33
PCDHA12-201ENST00000398631 IGKV1-39P01597 117 aa12.97□□□□□ -0.33
PCDHA12-201ENST00000398631 IGKV1D-39P04432 117 aa12.97□□□□□ -0.33
PCDHA12-201ENST00000398631 GAGE13Q4V321 117 aa12.97□□□□□ -0.33
PCDHA12-201ENST00000398631 ZNF492Q9P255 531 aa12.97□□□□□ -0.33
PCDHA12-201ENST00000398631 SMKR1H3BMG3 65 aa12.96□□□□□ -0.33
PCDHA12-201ENST00000398631 PFN1P07737 140 aaKnown RBP12.96□□□□□ -0.33
PCDHA12-201ENST00000398631 PAX9P55771 341 aa12.96□□□□□ -0.33
PCDHA12-201ENST00000398631 MST1LQ2TV78 715 aa12.96□□□□□ -0.33
PCDHA12-201ENST00000398631 TRPT1Q86TN4 253 aaKnown RBP12.96□□□□□ -0.33
PCDHA12-201ENST00000398631 TSC2P49815 1807 aa12.96□□□□□ -0.33
PCDHA12-201ENST00000398631 NLRC5Q86WI3 1866 aa12.96□□□□□ -0.33
PCDHA12-201ENST00000398631 TCF15Q12870 199 aa12.96□□□□□ -0.34
PCDHA12-201ENST00000398631 LY6G5BQ8NDX9 201 aa12.96□□□□□ -0.34
PCDHA12-201ENST00000398631 FAM231BA6NCW3 169 aa12.95□□□□□ -0.34
PCDHA12-201ENST00000398631 C1orf122Q6ZSJ8 110 aa12.95□□□□□ -0.34
PCDHA12-201ENST00000398631 ZNF134P52741 427 aa12.95□□□□□ -0.34
PCDHA12-201ENST00000398631 IGFL2Q6UWQ7 119 aa12.95□□□□□ -0.34
PCDHA12-201ENST00000398631 KIAA1671Q9BY89 1806 aa12.95□□□□□ -0.34
PCDHA12-201ENST00000398631 ELANEP08246 267 aa12.95□□□□□ -0.34
PCDHA12-201ENST00000398631 TPSG1Q9NRR2 321 aa12.95□□□□□ -0.34
PCDHA12-201ENST00000398631 HELZP42694 1942 aaKnown RBP12.95□□□□□ -0.34
PCDHA12-201ENST00000398631 KNCNA6PVL3 124 aa12.95□□□□□ -0.34
PCDHA12-201ENST00000398631 IGLV3-1P01715 115 aa12.95□□□□□ -0.34
PCDHA12-201ENST00000398631 SS18Q15532 418 aa12.95□□□□□ -0.34
PCDHA12-201ENST00000398631 C8orf86Q6ZUL3 223 aa12.95□□□□□ -0.34
PCDHA12-201ENST00000398631 C3orf79P0CE67 100 aa12.94□□□□□ -0.34
PCDHA12-201ENST00000398631 SONP18583 2426 aaKnown RBP12.94□□□□□ -0.34
PCDHA12-201ENST00000398631 ATXN8Q156A1 80 aa12.94□□□□□ -0.34
PCDHA12-201ENST00000398631 ZC2HC1BQ5TFG8 222 aa12.94□□□□□ -0.34
PCDHA12-201ENST00000398631 IGF2-ASQ6U949 168 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms