RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 ZNF48Q96MX3 618 aaPredicted RBP6.46□□□□□ -1.38
PTPRD-204ENST00000397606 FANCD2OSQ96PS1 177 aa6.46□□□□□ -1.38
PTPRD-204ENST00000397606 KLK15Q9H2R5 256 aa6.46□□□□□ -1.38
PTPRD-204ENST00000397606 MAP1LC3AQ9H492 121 aa6.46□□□□□ -1.38
PTPRD-204ENST00000397606 F2Z2F3 143 aa6.45□□□□□ -1.38
PTPRD-204ENST00000397606 M0R2Z0 102 aa6.45□□□□□ -1.38
PTPRD-204ENST00000397606 INSP01308 110 aa6.45□□□□□ -1.38
PTPRD-204ENST00000397606 IGHG4P01861 327 aa6.45□□□□□ -1.38
PTPRD-204ENST00000397606 Q8TAT8 98 aa6.45□□□□□ -1.38
PTPRD-204ENST00000397606 WFDC12Q8WWY7 111 aa6.45□□□□□ -1.38
PTPRD-204ENST00000397606 SMIM12Q96EX1 92 aa6.45□□□□□ -1.38
PTPRD-204ENST00000397606 TRAV8-1A0A0A6YYK1 113 aa6.45□□□□□ -1.38
PTPRD-204ENST00000397606 IZUMO1RA6ND01 250 aa6.45□□□□□ -1.38
PTPRD-204ENST00000397606 MDKP21741 143 aaPredicted RBP6.45□□□□□ -1.38
PTPRD-204ENST00000397606 LINC01551Q86U37 167 aa6.45□□□□□ -1.38
PTPRD-204ENST00000397606 TMEM158Q8WZ71 300 aa6.45□□□□□ -1.38
PTPRD-204ENST00000397606 EMP1P54849 157 aa6.45□□□□□ -1.38
PTPRD-204ENST00000397606 PLP1P60201 277 aa6.45□□□□□ -1.38
PTPRD-204ENST00000397606 CACNG7P62955 275 aa6.45□□□□□ -1.38
PTPRD-204ENST00000397606 ZNF726P1Q15940 193 aa6.45□□□□□ -1.38
PTPRD-204ENST00000397606 AP1S3Q96PC3 154 aa6.45□□□□□ -1.38
PTPRD-204ENST00000397606 DERL1Q9BUN8 251 aa6.45□□□□□ -1.38
PTPRD-204ENST00000397606 TNCP24821 2201 aa6.45□□□□□ -1.38
PTPRD-204ENST00000397606 TRGC2P03986 189 aa6.45□□□□□ -1.38
PTPRD-204ENST00000397606 RPL35AP18077 110 aaKnown RBP6.45□□□□□ -1.38
PTPRD-204ENST00000397606 GPHB5Q86YW7 130 aa6.45□□□□□ -1.38
PTPRD-204ENST00000397606 TSKUQ8WUA8 353 aa6.45□□□□□ -1.38
PTPRD-204ENST00000397606 PRSS1P07477 247 aa6.44□□□□□ -1.38
PTPRD-204ENST00000397606 OR5AL1P0C617 328 aa6.44□□□□□ -1.38
PTPRD-204ENST00000397606 MYCNOSP40205 109 aa6.44□□□□□ -1.38
PTPRD-204ENST00000397606 CDX1P47902 265 aaPredicted RBP6.44□□□□□ -1.38
PTPRD-204ENST00000397606 PMS2P11Q13670 270 aa6.44□□□□□ -1.38
PTPRD-204ENST00000397606 TMEM183AQ8IXX5 376 aa6.44□□□□□ -1.38
PTPRD-204ENST00000397606 RNF182Q8N6D2 247 aa6.44□□□□□ -1.38
PTPRD-204ENST00000397606 OR9G4Q8NGQ1 327 aa6.44□□□□□ -1.38
PTPRD-204ENST00000397606 LOC389332A0A1B0GUA5 103 aa6.44□□□□□ -1.38
PTPRD-204ENST00000397606 DIRC3C9JPN6 131 aa6.44□□□□□ -1.38
PTPRD-204ENST00000397606 K7EMT4 169 aa6.44□□□□□ -1.38
PTPRD-204ENST00000397606 SNRPEP62304 92 aaKnown RBP6.44□□□□□ -1.38
PTPRD-204ENST00000397606 Q86TA4 180 aa6.44□□□□□ -1.38
PTPRD-204ENST00000397606 Q8N6K4 173 aa6.44□□□□□ -1.38
PTPRD-204ENST00000397606 TMEM75Q8N9X5 138 aa6.44□□□□□ -1.38
PTPRD-204ENST00000397606 NUDT10Q8NFP7 164 aa6.44□□□□□ -1.38
PTPRD-204ENST00000397606 C4orf3Q8WVX3 66 aa6.44□□□□□ -1.38
PTPRD-204ENST00000397606 FXYD5Q96DB9 178 aa6.44□□□□□ -1.38
PTPRD-204ENST00000397606 NUDT11Q96G61 164 aa6.44□□□□□ -1.38
PTPRD-204ENST00000397606 TRBV20OR9-2A0A075B6H5 130 aa6.44□□□□□ -1.38
PTPRD-204ENST00000397606 SLURP1P55000 103 aa6.44□□□□□ -1.38
PTPRD-204ENST00000397606 DEFB121Q5J5C9 76 aa6.44□□□□□ -1.38
PTPRD-204ENST00000397606 Q6ZN92 141 aa6.44□□□□□ -1.38
PTPRD-204ENST00000397606 MYOZ3Q8TDC0 251 aa6.44□□□□□ -1.38
PTPRD-204ENST00000397606 KIR2DL4Q99706 377 aa6.44□□□□□ -1.38
PTPRD-204ENST00000397606 SZT2Q5T011 3432 aa6.44□□□□□ -1.38
PTPRD-204ENST00000397606 ABCA12Q86UK0 2595 aa6.44□□□□□ -1.38
PTPRD-204ENST00000397606 IGHV4OR15-8A0A075B7B6 117 aa6.43□□□□□ -1.38
PTPRD-204ENST00000397606 A0A087WW49 117 aa6.43□□□□□ -1.38
PTPRD-204ENST00000397606 TRAV12-3A0A0B4J271 114 aa6.43□□□□□ -1.38
PTPRD-204ENST00000397606 LINC01548A6NM66 108 aa6.43□□□□□ -1.38
PTPRD-204ENST00000397606 HSPB8Q9UJY1 196 aa6.43□□□□□ -1.38
PTPRD-204ENST00000397606 ARHGAP32A7KAX9 2087 aa6.43□□□□□ -1.38
PTPRD-204ENST00000397606 MUC21A0A0G2JKD1 596 aa6.43□□□□□ -1.38
PTPRD-204ENST00000397606 MUC21A0A140T8X8 626 aa6.43□□□□□ -1.38
PTPRD-204ENST00000397606 AVPP01185 164 aa6.43□□□□□ -1.38
PTPRD-204ENST00000397606 PRB4P10163 310 aaPredicted RBP6.43□□□□□ -1.38
PTPRD-204ENST00000397606 CBLN1P23435 193 aa6.43□□□□□ -1.38
PTPRD-204ENST00000397606 C9orf66Q5T8R8 295 aa6.43□□□□□ -1.38
PTPRD-204ENST00000397606 OR8A1Q8NGG7 326 aa6.43□□□□□ -1.38
PTPRD-204ENST00000397606 ZNF414Q96IQ9 312 aa6.43□□□□□ -1.38
PTPRD-204ENST00000397606 SPAG8Q99932 426 aaPredicted RBP6.43□□□□□ -1.38
PTPRD-204ENST00000397606 TMEM242Q9NWH2 141 aa6.43□□□□□ -1.38
PTPRD-204ENST00000397606 GGTLC3B5MD39 225 aa6.43□□□□□ -1.38
PTPRD-204ENST00000397606 SRIP30626 198 aa6.43□□□□□ -1.38
PTPRD-204ENST00000397606 IMMP2LQ96T52 175 aa6.43□□□□□ -1.38
PTPRD-204ENST00000397606 C11orf1Q9H5F2 150 aa6.43□□□□□ -1.38
PTPRD-204ENST00000397606 TNFRSF18Q9Y5U5 241 aa6.43□□□□□ -1.38
PTPRD-204ENST00000397606 TMEM136Q6ZRR5 245 aa6.43□□□□□ -1.38
PTPRD-204ENST00000397606 REC114Q7Z4M0 266 aa6.43□□□□□ -1.38
PTPRD-204ENST00000397606 CITED2Q99967 270 aaPredicted RBP6.43□□□□□ -1.38
PTPRD-204ENST00000397606 BPTFQ12830 3046 aa6.43□□□□□ -1.38
PTPRD-204ENST00000397606 RNASE1P07998 156 aaKnown RBP6.42□□□□□ -1.38
PTPRD-204ENST00000397606 ZNF415Q09FC8 603 aa6.42□□□□□ -1.38
PTPRD-204ENST00000397606 ERCC8Q13216 396 aa6.42□□□□□ -1.38
PTPRD-204ENST00000397606 AMMECR1LQ6DCA0 310 aa6.42□□□□□ -1.38
PTPRD-204ENST00000397606 ZNF705AQ6ZN79 300 aaPredicted RBP6.42□□□□□ -1.38
PTPRD-204ENST00000397606 UBE2L6O14933 153 aa6.42□□□□□ -1.38
PTPRD-204ENST00000397606 BUB3O43684 328 aa6.42□□□□□ -1.38
PTPRD-204ENST00000397606 SH2D1AO60880 128 aa6.42□□□□□ -1.38
PTPRD-204ENST00000397606 HILS1P60008 231 aa6.42□□□□□ -1.38
PTPRD-204ENST00000397606 KIAA1644Q3SXP7 199 aa6.42□□□□□ -1.38
PTPRD-204ENST00000397606 Q6ZSV7 163 aa6.42□□□□□ -1.38
PTPRD-204ENST00000397606 LINC00479Q96M42 142 aa6.42□□□□□ -1.38
PTPRD-204ENST00000397606 MAP1LC3CQ9BXW4 147 aa6.42□□□□□ -1.38
PTPRD-204ENST00000397606 WI2-2373I1.2A0A1W2PRP0 233 aa6.42□□□□□ -1.38
PTPRD-204ENST00000397606 FAM90A2PQ658T7 463 aa6.42□□□□□ -1.38
PTPRD-204ENST00000397606 MRPL53Q96EL3 112 aaKnown RBP6.42□□□□□ -1.38
PTPRD-204ENST00000397606 H3BVH4 76 aa6.42□□□□□ -1.38
PTPRD-204ENST00000397606 ELOBQ15370 118 aa6.42□□□□□ -1.38
PTPRD-204ENST00000397606 OR10D4PQ8NGN7 298 aa6.42□□□□□ -1.38
PTPRD-204ENST00000397606 POLQO75417 2590 aa6.41□□□□□ -1.38
PTPRD-204ENST00000397606 IGKV1OR2-108A0A075B7D4 117 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms