RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 CCDC140Q96MF4 163 aa12.85□□□□□ -0.35
TRIM39-205ENST00000396551 CACNA1BQ00975 2339 aa12.85□□□□□ -0.35
TRIM39-205ENST00000396551 HSBP1O75506 76 aa12.85□□□□□ -0.35
TRIM39-205ENST00000396551 ARMS2P0C7Q2 107 aa12.85□□□□□ -0.35
TRIM39-205ENST00000396551 HLA-DMBP28068 263 aa12.85□□□□□ -0.35
TRIM39-205ENST00000396551 IGFL4Q6B9Z1 124 aa12.85□□□□□ -0.35
TRIM39-205ENST00000396551 RNASEKQ6P5S7 137 aaKnown RBP12.85□□□□□ -0.35
TRIM39-205ENST00000396551 VAMP8Q9BV40 100 aa12.85□□□□□ -0.35
TRIM39-205ENST00000396551 IGHV4-61A0A0C4DH41 118 aa12.84□□□□□ -0.35
TRIM39-205ENST00000396551 CBY3A6NI87 242 aa12.84□□□□□ -0.35
TRIM39-205ENST00000396551 SCGB2A1O75556 95 aa12.84□□□□□ -0.35
TRIM39-205ENST00000396551 CLEC3BP05452 202 aa12.84□□□□□ -0.35
TRIM39-205ENST00000396551 TMEM219Q86XT9 240 aa12.84□□□□□ -0.35
TRIM39-205ENST00000396551 M0QZ24 198 aa12.84□□□□□ -0.35
TRIM39-205ENST00000396551 LOC102724200A0A096LPH7 203 aaPredicted RBP12.84□□□□□ -0.35
TRIM39-205ENST00000396551 CHEK1O14757 476 aa12.84□□□□□ -0.35
TRIM39-205ENST00000396551 CSN1S1P47710 185 aa12.84□□□□□ -0.35
TRIM39-205ENST00000396551 PIEZO1Q92508 2521 aa12.83□□□□□ -0.36
TRIM39-205ENST00000396551 PIFOQ8TCI5 191 aa12.83□□□□□ -0.36
TRIM39-205ENST00000396551 TMEM208Q9BTX3 173 aa12.83□□□□□ -0.36
TRIM39-205ENST00000396551 A0A1B0GUT8 65 aa12.83□□□□□ -0.36
TRIM39-205ENST00000396551 SERTM2A0A1B0GWG4 89 aa12.83□□□□□ -0.36
TRIM39-205ENST00000396551 M0R2Z0 102 aa12.83□□□□□ -0.36
TRIM39-205ENST00000396551 CLEC19AQ6UXS0 136 aa12.83□□□□□ -0.36
TRIM39-205ENST00000396551 CFAP46Q8IYW2 2715 aa12.82□□□□□ -0.36
TRIM39-205ENST00000396551 CACNA1AO00555 2505 aa12.82□□□□□ -0.36
TRIM39-205ENST00000396551 EBLN2Q6P2I7 272 aa12.82□□□□□ -0.36
TRIM39-205ENST00000396551 BORCS7Q96B45 105 aa12.82□□□□□ -0.36
TRIM39-205ENST00000396551 SNHG12Q9BXW3 62 aa12.82□□□□□ -0.36
TRIM39-205ENST00000396551 CLPSL1A2RUU4 121 aa12.82□□□□□ -0.36
TRIM39-205ENST00000396551 FAM181BA6NEQ2 426 aa12.82□□□□□ -0.36
TRIM39-205ENST00000396551 TCF21O43680 179 aa12.82□□□□□ -0.36
TRIM39-205ENST00000396551 BRD3OSQ6XYD6 125 aa12.82□□□□□ -0.36
TRIM39-205ENST00000396551 IGHV1-69DA0A0B4J2H0 117 aa12.81□□□□□ -0.36
TRIM39-205ENST00000396551 SH2D1AO60880 128 aa12.81□□□□□ -0.36
TRIM39-205ENST00000396551 IGHV1-69P01742 117 aa12.81□□□□□ -0.36
TRIM39-205ENST00000396551 CTRLP40313 264 aa12.81□□□□□ -0.36
TRIM39-205ENST00000396551 CCL19Q99731 98 aa12.81□□□□□ -0.36
TRIM39-205ENST00000396551 VGLL1Q99990 258 aa12.81□□□□□ -0.36
TRIM39-205ENST00000396551 NDFIP1Q9BT67 221 aa12.81□□□□□ -0.36
TRIM39-205ENST00000396551 CT45A10P0DMU9 189 aa12.81□□□□□ -0.36
TRIM39-205ENST00000396551 COX8CQ7Z4L0 72 aa12.81□□□□□ -0.36
TRIM39-205ENST00000396551 GATD1Q8NB37 220 aa12.81□□□□□ -0.36
TRIM39-205ENST00000396551 Q8TAT8 98 aa12.81□□□□□ -0.36
TRIM39-205ENST00000396551 RNASE8Q8TDE3 154 aaKnown RBP12.81□□□□□ -0.36
TRIM39-205ENST00000396551 C10orf105Q8TEF2 133 aa12.81□□□□□ -0.36
TRIM39-205ENST00000396551 PRR25Q96S07 402 aa12.81□□□□□ -0.36
TRIM39-205ENST00000396551 PIMREGQ9BSJ6 248 aa12.81□□□□□ -0.36
TRIM39-205ENST00000396551 CELSR1Q9NYQ6 3014 aa12.81□□□□□ -0.36
TRIM39-205ENST00000396551 BUB3O43684 328 aa12.81□□□□□ -0.36
TRIM39-205ENST00000396551 LBHQ53QV2 105 aaPredicted RBP12.81□□□□□ -0.36
TRIM39-205ENST00000396551 LCN12Q6JVE5 192 aa12.81□□□□□ -0.36
TRIM39-205ENST00000396551 MIEN1Q9BRT3 115 aa12.81□□□□□ -0.36
TRIM39-205ENST00000396551 TRAV40A0A0B4J280 105 aa12.8□□□□□ -0.36
TRIM39-205ENST00000396551 DLEU1O43261 78 aa12.8□□□□□ -0.36
TRIM39-205ENST00000396551 PMCHL1Q16048 86 aa12.8□□□□□ -0.36
TRIM39-205ENST00000396551 C2orf70A6NJV1 201 aa12.8□□□□□ -0.36
TRIM39-205ENST00000396551 C19orf54Q5BKX5 351 aa12.8□□□□□ -0.36
TRIM39-205ENST00000396551 MOB4Q9Y3A3 225 aa12.8□□□□□ -0.36
TRIM39-205ENST00000396551 SPTAN1Q13813 2472 aaKnown RBP12.79□□□□□ -0.36
TRIM39-205ENST00000396551 IGHV3-66A0A0C4DH42 116 aa12.79□□□□□ -0.36
TRIM39-205ENST00000396551 HSBP1L1C9JCN9 74 aa12.79□□□□□ -0.36
TRIM39-205ENST00000396551 RIGQ13278 110 aa12.79□□□□□ -0.36
TRIM39-205ENST00000396551 ZNF705AQ6ZN79 300 aaPredicted RBP12.79□□□□□ -0.36
TRIM39-205ENST00000396551 LINC00527Q9UJ94 153 aa12.79□□□□□ -0.36
TRIM39-205ENST00000396551 COL12A1Q99715 3063 aa12.79□□□□□ -0.36
TRIM39-205ENST00000396551 TMSB15BA0A087X1C1 80 aa12.79□□□□□ -0.36
TRIM39-205ENST00000396551 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.79□□□□□ -0.36
TRIM39-205ENST00000396551 ZNF80P51504 273 aaPredicted RBP12.79□□□□□ -0.36
TRIM39-205ENST00000396551 EEF1AKMT3Q96AZ1 226 aa12.79□□□□□ -0.36
TRIM39-205ENST00000396551 CLEC5AQ9NY25 188 aa12.79□□□□□ -0.36
TRIM39-205ENST00000396551 A0A087X0K7 114 aa12.79□□□□□ -0.36
TRIM39-205ENST00000396551 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.79□□□□□ -0.36
TRIM39-205ENST00000396551 TPPP3Q9BW30 176 aa12.79□□□□□ -0.36
TRIM39-205ENST00000396551 GOSR1O95249 250 aa12.78□□□□□ -0.36
TRIM39-205ENST00000396551 IGHV4-38-2P0DP08 117 aa12.78□□□□□ -0.36
TRIM39-205ENST00000396551 FAM162BQ5T6X4 162 aa12.78□□□□□ -0.36
TRIM39-205ENST00000396551 SPATA12Q7Z6I5 190 aa12.78□□□□□ -0.36
TRIM39-205ENST00000396551 TMEM189A5PLL7 270 aa12.78□□□□□ -0.36
TRIM39-205ENST00000396551 PRAC2D3DTV9 90 aa12.78□□□□□ -0.36
TRIM39-205ENST00000396551 SPATA45Q537H7 98 aa12.78□□□□□ -0.36
TRIM39-205ENST00000396551 CHCHD1Q96BP2 118 aaKnown RBP12.78□□□□□ -0.36
TRIM39-205ENST00000396551 IGHV3OR16-13A0A075B7E8 117 aa12.77□□□□□ -0.36
TRIM39-205ENST00000396551 IGHV4-30-2A0A087WSY4 118 aa12.77□□□□□ -0.36
TRIM39-205ENST00000396551 IGHV3-74A0A0B4J1X5 117 aa12.77□□□□□ -0.36
TRIM39-205ENST00000396551 IGHV1-24A0A0C4DH33 117 aa12.77□□□□□ -0.36
TRIM39-205ENST00000396551 ZNF138P52744 262 aa12.77□□□□□ -0.36
TRIM39-205ENST00000396551 RBX1P62877 108 aa12.77□□□□□ -0.36
TRIM39-205ENST00000396551 Q6AWC8 147 aa12.77□□□□□ -0.36
TRIM39-205ENST00000396551 LYZL1Q6UWQ5 148 aa12.77□□□□□ -0.36
TRIM39-205ENST00000396551 ATOH7Q8N100 152 aa12.77□□□□□ -0.36
TRIM39-205ENST00000396551 TRBV7-1A0A0A6YYK4 115 aa12.77□□□□□ -0.37
TRIM39-205ENST00000396551 ZNF575Q86XF7 245 aa12.77□□□□□ -0.37
TRIM39-205ENST00000396551 RNF182Q8N6D2 247 aa12.77□□□□□ -0.37
TRIM39-205ENST00000396551 MEGF9Q9H1U4 602 aa12.77□□□□□ -0.37
TRIM39-205ENST00000396551 TRAV41A0A0B4J266 112 aa12.77□□□□□ -0.37
TRIM39-205ENST00000396551 A6NJY4 79 aa12.76□□□□□ -0.37
TRIM39-205ENST00000396551 M0R143 59 aa12.76□□□□□ -0.37
TRIM39-205ENST00000396551 ZNF207O43670 478 aaKnown RBP12.76□□□□□ -0.37
TRIM39-205ENST00000396551 LINC00614P0C842 121 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms