RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 SLC25A20O43772 301 aa9.15□□□□□ -0.94
RAPGEF3-202ENST00000395358 PRR30Q53SZ7 412 aaPredicted RBP9.15□□□□□ -0.94
RAPGEF3-202ENST00000395358 C20orf204Q6ZNR8 217 aa9.15□□□□□ -0.94
RAPGEF3-202ENST00000395358 FAM231DQ6ZW35 169 aa9.15□□□□□ -0.94
RAPGEF3-202ENST00000395358 LINC00596Q86U02 117 aa9.15□□□□□ -0.94
RAPGEF3-202ENST00000395358 ANKRD29Q8N6D5 301 aa9.15□□□□□ -0.94
RAPGEF3-202ENST00000395358 TRAV25A0A0B4J276 109 aa9.15□□□□□ -0.94
RAPGEF3-202ENST00000395358 COX6CP09669 75 aa9.15□□□□□ -0.94
RAPGEF3-202ENST00000395358 PLGLAQ15195 96 aa9.15□□□□□ -0.94
RAPGEF3-202ENST00000395358 NPFFO15130 113 aa9.15□□□□□ -0.95
RAPGEF3-202ENST00000395358 ARMS2P0C7Q2 107 aa9.15□□□□□ -0.95
RAPGEF3-202ENST00000395358 PRB4P10163 310 aaPredicted RBP9.15□□□□□ -0.95
RAPGEF3-202ENST00000395358 ZNF837Q96EG3 531 aaPredicted RBP9.15□□□□□ -0.95
RAPGEF3-202ENST00000395358 LINC00312Q9Y6C7 94 aa9.15□□□□□ -0.95
RAPGEF3-202ENST00000395358 MBD3L4A6NDZ8 208 aaPredicted RBP9.14□□□□□ -0.95
RAPGEF3-202ENST00000395358 MBD3L3A6NE82 208 aaPredicted RBP9.14□□□□□ -0.95
RAPGEF3-202ENST00000395358 MBD3L5A6NJ08 208 aaPredicted RBP9.14□□□□□ -0.95
RAPGEF3-202ENST00000395358 ORM1P02763 201 aa9.14□□□□□ -0.95
RAPGEF3-202ENST00000395358 CD3EP07766 207 aa9.14□□□□□ -0.95
RAPGEF3-202ENST00000395358 LINC00205P59089 165 aa9.14□□□□□ -0.95
RAPGEF3-202ENST00000395358 MOGAT3Q86VF5 341 aa9.14□□□□□ -0.95
RAPGEF3-202ENST00000395358 Q8IYB0 196 aa9.14□□□□□ -0.95
RAPGEF3-202ENST00000395358 MBD3L2Q8NHZ7 208 aaPredicted RBP9.14□□□□□ -0.95
RAPGEF3-202ENST00000395358 NABP1Q96AH0 204 aa9.14□□□□□ -0.95
RAPGEF3-202ENST00000395358 CHCHD5Q9BSY4 110 aa9.14□□□□□ -0.95
RAPGEF3-202ENST00000395358 DSCAML1Q8TD84 2053 aa9.14□□□□□ -0.95
RAPGEF3-202ENST00000395358 SLC25A48Q6ZT89 311 aaKnown RBP9.14□□□□□ -0.95
RAPGEF3-202ENST00000395358 OR9G1Q8NH87 305 aa9.14□□□□□ -0.95
RAPGEF3-202ENST00000395358 FGFBP3Q8TAT2 258 aa9.14□□□□□ -0.95
RAPGEF3-202ENST00000395358 SPTBN5Q9NRC6 3674 aaKnown RBP9.14□□□□□ -0.95
RAPGEF3-202ENST00000395358 TRAV4A0A0B4J268 109 aa9.14□□□□□ -0.95
RAPGEF3-202ENST00000395358 LINC00694P0DN24 101 aa9.14□□□□□ -0.95
RAPGEF3-202ENST00000395358 SRSF2Q01130 221 aaKnown RBP9.14□□□□□ -0.95
RAPGEF3-202ENST00000395358 FOXF2Q12947 444 aa9.14□□□□□ -0.95
RAPGEF3-202ENST00000395358 OR11H6Q8NGC7 330 aa9.14□□□□□ -0.95
RAPGEF3-202ENST00000395358 HS3ST6Q96QI5 342 aa9.14□□□□□ -0.95
RAPGEF3-202ENST00000395358 VWC2LB2RUY7 222 aa9.13□□□□□ -0.95
RAPGEF3-202ENST00000395358 SMKR1H3BMG3 65 aa9.13□□□□□ -0.95
RAPGEF3-202ENST00000395358 J3QT63 122 aa9.13□□□□□ -0.95
RAPGEF3-202ENST00000395358 RHODO00212 210 aa9.13□□□□□ -0.95
RAPGEF3-202ENST00000395358 LYZP61626 148 aa9.13□□□□□ -0.95
RAPGEF3-202ENST00000395358 LINC00305Q7Z4B0 112 aa9.13□□□□□ -0.95
RAPGEF3-202ENST00000395358 CDIP1Q9H305 208 aa9.13□□□□□ -0.95
RAPGEF3-202ENST00000395358 ARFGEF3Q5TH69 2177 aa9.13□□□□□ -0.95
RAPGEF3-202ENST00000395358 TNFRSF1AP19438 455 aa9.13□□□□□ -0.95
RAPGEF3-202ENST00000395358 IGHV1-2P23083 117 aa9.13□□□□□ -0.95
RAPGEF3-202ENST00000395358 LOXL3P58215 753 aa9.13□□□□□ -0.95
RAPGEF3-202ENST00000395358 FAM27E3Q08E93 113 aa9.13□□□□□ -0.95
RAPGEF3-202ENST00000395358 Q6ZS49 121 aa9.13□□□□□ -0.95
RAPGEF3-202ENST00000395358 MYMXA0A1B0GTQ4 84 aa9.13□□□□□ -0.95
RAPGEF3-202ENST00000395358 FOXE3Q13461 319 aa9.13□□□□□ -0.95
RAPGEF3-202ENST00000395358 HOXA4Q00056 320 aaPredicted RBP9.12□□□□□ -0.95
RAPGEF3-202ENST00000395358 TAL2Q16559 108 aa9.12□□□□□ -0.95
RAPGEF3-202ENST00000395358 AMN1Q8IY45 258 aa9.12□□□□□ -0.95
RAPGEF3-202ENST00000395358 NXT2Q9NPJ8 142 aaKnown RBP9.12□□□□□ -0.95
RAPGEF3-202ENST00000395358 HIGD1BQ9P298 99 aa9.12□□□□□ -0.95
RAPGEF3-202ENST00000395358 ZNF292O60281 2723 aa9.12□□□□□ -0.95
RAPGEF3-202ENST00000395358 NPIPB11E5RHQ5 1161 aa9.12□□□□□ -0.95
RAPGEF3-202ENST00000395358 PRNDQ9UKY0 176 aa9.12□□□□□ -0.95
RAPGEF3-202ENST00000395358 C12orf77C9JDV5 145 aa9.12□□□□□ -0.95
RAPGEF3-202ENST00000395358 NDUFS7O75251 213 aa9.12□□□□□ -0.95
RAPGEF3-202ENST00000395358 C2orf82Q6UX34 121 aa9.12□□□□□ -0.95
RAPGEF3-202ENST00000395358 Q8TCH9 128 aa9.12□□□□□ -0.95
RAPGEF3-202ENST00000395358 FMC1Q96HJ9 113 aa9.12□□□□□ -0.95
RAPGEF3-202ENST00000395358 DNAJC30Q96LL9 226 aa9.12□□□□□ -0.95
RAPGEF3-202ENST00000395358 PRADC1Q9BSG0 188 aa9.12□□□□□ -0.95
RAPGEF3-202ENST00000395358 FAM236AA0A1B0GUQ0 79 aa9.11□□□□□ -0.95
RAPGEF3-202ENST00000395358 FAM236BA0A1B0GV22 79 aa9.11□□□□□ -0.95
RAPGEF3-202ENST00000395358 PRSS2P07478 247 aa9.11□□□□□ -0.95
RAPGEF3-202ENST00000395358 LOC107984640A0A0U1RRK4 108 aa9.11□□□□□ -0.95
RAPGEF3-202ENST00000395358 CALYQ9NYX4 217 aa9.11□□□□□ -0.95
RAPGEF3-202ENST00000395358 IGHV3-21A0A0B4J1V1 117 aa9.11□□□□□ -0.95
RAPGEF3-202ENST00000395358 FGF6P10767 208 aa9.11□□□□□ -0.95
RAPGEF3-202ENST00000395358 HLA-DRB4P13762 266 aa9.11□□□□□ -0.95
RAPGEF3-202ENST00000395358 HLA-DRB4X5D2U9 266 aa9.11□□□□□ -0.95
RAPGEF3-202ENST00000395358 FREM1Q5H8C1 2179 aa9.11□□□□□ -0.95
RAPGEF3-202ENST00000395358 ATRXP46100 2492 aa9.11□□□□□ -0.95
RAPGEF3-202ENST00000395358 CENPVL3A0A0U1RRI6 287 aa9.1□□□□□ -0.95
RAPGEF3-202ENST00000395358 NCOA6Q14686 2063 aaPredicted RBP9.1□□□□□ -0.95
RAPGEF3-202ENST00000395358 PRORYQ9H606 182 aa9.1□□□□□ -0.95
RAPGEF3-202ENST00000395358 A0A1W2PPI3 338 aa9.1□□□□□ -0.95
RAPGEF3-202ENST00000395358 H3BMM0 161 aa9.1□□□□□ -0.95
RAPGEF3-202ENST00000395358 BRI3O95415 125 aa9.1□□□□□ -0.95
RAPGEF3-202ENST00000395358 NPYP01303 97 aa9.1□□□□□ -0.95
RAPGEF3-202ENST00000395358 KIR2DS2P43631 304 aa9.1□□□□□ -0.95
RAPGEF3-202ENST00000395358 UBE2WQ96B02 151 aa9.1□□□□□ -0.95
RAPGEF3-202ENST00000395358 PMS2P5A8MQ11 134 aa9.1□□□□□ -0.95
RAPGEF3-202ENST00000395358 SYNGR3O43761 229 aa9.1□□□□□ -0.95
RAPGEF3-202ENST00000395358 ZNF474Q6S9Z5 364 aaPredicted RBP9.1□□□□□ -0.95
RAPGEF3-202ENST00000395358 MOB3BQ86TA1 216 aa9.1□□□□□ -0.95
RAPGEF3-202ENST00000395358 NRGNQ92686 78 aa9.1□□□□□ -0.95
RAPGEF3-202ENST00000395358 A0A0G2JNJ9 132 aa9.09□□□□□ -0.95
RAPGEF3-202ENST00000395358 TRACP01848 142 aa9.09□□□□□ -0.95
RAPGEF3-202ENST00000395358 FOXG1P55316 489 aaPredicted RBP9.09□□□□□ -0.95
RAPGEF3-202ENST00000395358 SRSF1Q07955 248 aaKnown RBP eCLIP9.09□□□□□ -0.95
RAPGEF3-202ENST00000395358 FAM120AOSQ5T036 256 aa9.09□□□□□ -0.95
RAPGEF3-202ENST00000395358 TMEM170BQ5T4T1 132 aa9.09□□□□□ -0.95
RAPGEF3-202ENST00000395358 RNASE6Q93091 150 aaKnown RBP9.09□□□□□ -0.95
RAPGEF3-202ENST00000395358 DUX5Q96PT3 197 aa9.09□□□□□ -0.95
RAPGEF3-202ENST00000395358 Q9UFV3 132 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms