RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 H2BFSP57053 126 aa6.22□□□□□ -1.41
ATG4A-205ENST00000394892 LCN15Q6UWW0 184 aa6.22□□□□□ -1.41
ATG4A-205ENST00000394892 BPIFA4PQ86YQ2 179 aa6.22□□□□□ -1.41
ATG4A-205ENST00000394892 FAM167A-AS1Q96KT0 104 aa6.22□□□□□ -1.41
ATG4A-205ENST00000394892 SLC39A9Q9NUM3 307 aa6.22□□□□□ -1.41
ATG4A-205ENST00000394892 DEFB130BP0DP73 79 aa6.21□□□□□ -1.42
ATG4A-205ENST00000394892 DEFB130AP0DP74 79 aa6.21□□□□□ -1.42
ATG4A-205ENST00000394892 PYYP10082 97 aa6.21□□□□□ -1.42
ATG4A-205ENST00000394892 S100A11P31949 105 aa6.21□□□□□ -1.42
ATG4A-205ENST00000394892 B2MP61769 119 aa6.21□□□□□ -1.42
ATG4A-205ENST00000394892 DAD1P61803 113 aa6.21□□□□□ -1.42
ATG4A-205ENST00000394892 RHOBP62745 196 aa6.21□□□□□ -1.42
ATG4A-205ENST00000394892 ERCC8Q13216 396 aa6.21□□□□□ -1.42
ATG4A-205ENST00000394892 GFI1BQ5VTD9 330 aa6.21□□□□□ -1.42
ATG4A-205ENST00000394892 Q6ZQT7 251 aa6.21□□□□□ -1.42
ATG4A-205ENST00000394892 RNASE8Q8TDE3 154 aaKnown RBP6.21□□□□□ -1.42
ATG4A-205ENST00000394892 S100ZQ8WXG8 99 aa6.21□□□□□ -1.42
ATG4A-205ENST00000394892 LINC01587Q99440 93 aa6.21□□□□□ -1.42
ATG4A-205ENST00000394892 TMEM208Q9BTX3 173 aa6.21□□□□□ -1.42
ATG4A-205ENST00000394892 PXMP4Q9Y6I8 212 aa6.21□□□□□ -1.42
ATG4A-205ENST00000394892 RYR1P21817 5038 aa6.2□□□□□ -1.42
ATG4A-205ENST00000394892 LRP1BQ9NZR2 4599 aa6.2□□□□□ -1.42
ATG4A-205ENST00000394892 PCLOQ9Y6V0 5065 aa6.2□□□□□ -1.42
ATG4A-205ENST00000394892 IGLV2-18A0A075B6J9 118 aa6.2□□□□□ -1.42
ATG4A-205ENST00000394892 TRBV19A0A075B6N1 114 aa6.2□□□□□ -1.42
ATG4A-205ENST00000394892 TEX48A0A1B0GUV7 120 aa6.2□□□□□ -1.42
ATG4A-205ENST00000394892 LYRM9A8MSI8 78 aa6.2□□□□□ -1.42
ATG4A-205ENST00000394892 NPIPB6E9PJ23 425 aa6.2□□□□□ -1.42
ATG4A-205ENST00000394892 FGF7P21781 194 aa6.2□□□□□ -1.42
ATG4A-205ENST00000394892 S100A7P31151 101 aa6.2□□□□□ -1.42
ATG4A-205ENST00000394892 CDKN1BP46527 198 aa6.2□□□□□ -1.42
ATG4A-205ENST00000394892 TAS2R60P59551 318 aa6.2□□□□□ -1.42
ATG4A-205ENST00000394892 BAXQ07812 192 aa6.2□□□□□ -1.42
ATG4A-205ENST00000394892 LGALS9BQ3B8N2 356 aa6.2□□□□□ -1.42
ATG4A-205ENST00000394892 MZT2BQ6NZ67 158 aa6.2□□□□□ -1.42
ATG4A-205ENST00000394892 MIR17HGQ75NE6 70 aa6.2□□□□□ -1.42
ATG4A-205ENST00000394892 UBE2DNLQ8IWF7 75 aa6.2□□□□□ -1.42
ATG4A-205ENST00000394892 LINC00612Q8N6U2 182 aa6.2□□□□□ -1.42
ATG4A-205ENST00000394892 THAP6Q8TBB0 222 aa6.2□□□□□ -1.42
ATG4A-205ENST00000394892 LRRC20Q8TCA0 184 aa6.2□□□□□ -1.42
ATG4A-205ENST00000394892 ZNF503Q96F45 646 aa6.2□□□□□ -1.42
ATG4A-205ENST00000394892 FAM210BQ96KR6 192 aa6.2□□□□□ -1.42
ATG4A-205ENST00000394892 FAM19A4Q96LR4 140 aa6.2□□□□□ -1.42
ATG4A-205ENST00000394892 SLC50A1Q9BRV3 221 aa6.2□□□□□ -1.42
ATG4A-205ENST00000394892 MARVELD1Q9BSK0 173 aa6.2□□□□□ -1.42
ATG4A-205ENST00000394892 SLC25A2Q9BXI2 301 aa6.2□□□□□ -1.42
ATG4A-205ENST00000394892 NPCDR1Q9BY65 106 aa6.2□□□□□ -1.42
ATG4A-205ENST00000394892 GPN1Q9HCN4 374 aaPredicted RBP6.2□□□□□ -1.42
ATG4A-205ENST00000394892 INMT-MINDY4F8WBC2 141 aa6.19□□□□□ -1.42
ATG4A-205ENST00000394892 EIF3GO75821 320 aaKnown RBP eCLIP6.19□□□□□ -1.42
ATG4A-205ENST00000394892 HTN1P15515 57 aa6.19□□□□□ -1.42
ATG4A-205ENST00000394892 PRR9Q5T870 116 aa6.19□□□□□ -1.42
ATG4A-205ENST00000394892 Q6ZRG5 221 aa6.19□□□□□ -1.42
ATG4A-205ENST00000394892 EXOC3-AS1Q8N2X6 119 aa6.19□□□□□ -1.42
ATG4A-205ENST00000394892 OR5C1Q8NGR4 320 aa6.19□□□□□ -1.42
ATG4A-205ENST00000394892 OR1L4Q8NGR5 311 aa6.19□□□□□ -1.42
ATG4A-205ENST00000394892 AGPAT4-IT1Q9H0P7 198 aa6.19□□□□□ -1.42
ATG4A-205ENST00000394892 NOP10Q9NPE3 64 aaKnown RBP6.19□□□□□ -1.42
ATG4A-205ENST00000394892 PTTG2Q9NZH5 202 aa6.19□□□□□ -1.42
ATG4A-205ENST00000394892 TMEM14CQ9P0S9 112 aa6.19□□□□□ -1.42
ATG4A-205ENST00000394892 J3KRW8 73 aa6.18□□□□□ -1.42
ATG4A-205ENST00000394892 ZNF253O75346 499 aa6.18□□□□□ -1.42
ATG4A-205ENST00000394892 ZNF324O75467 553 aaPredicted RBP6.18□□□□□ -1.42
ATG4A-205ENST00000394892 HIST1H1EP10412 219 aaKnown RBP6.18□□□□□ -1.42
ATG4A-205ENST00000394892 PVALBP20472 110 aaPredicted RBP6.18□□□□□ -1.42
ATG4A-205ENST00000394892 HOXA5P20719 270 aa6.18□□□□□ -1.42
ATG4A-205ENST00000394892 CD300CQ08708 224 aa6.18□□□□□ -1.42
ATG4A-205ENST00000394892 RAB31Q13636 194 aa6.18□□□□□ -1.42
ATG4A-205ENST00000394892 CLINT1Q14677 625 aa6.18□□□□□ -1.42
ATG4A-205ENST00000394892 ATP6V1FQ16864 119 aa6.18□□□□□ -1.42
ATG4A-205ENST00000394892 LRRC37A5PQ49AS3 106 aa6.18□□□□□ -1.42
ATG4A-205ENST00000394892 C4orf48Q5BLP8 95 aa6.18□□□□□ -1.42
ATG4A-205ENST00000394892 S100A7AQ86SG5 101 aa6.18□□□□□ -1.42
ATG4A-205ENST00000394892 STX12Q86Y82 276 aa6.18□□□□□ -1.42
ATG4A-205ENST00000394892 TMEM256Q8N2U0 113 aa6.18□□□□□ -1.42
ATG4A-205ENST00000394892 ENKURQ8TC29 256 aa6.18□□□□□ -1.42
ATG4A-205ENST00000394892 VGLL1Q99990 258 aa6.18□□□□□ -1.42
ATG4A-205ENST00000394892 NMES1Q9C002 83 aa6.18□□□□□ -1.42
ATG4A-205ENST00000394892 WFDC1Q9HC57 220 aa6.18□□□□□ -1.42
ATG4A-205ENST00000394892 IGKV2-40A0A087WW87 121 aaPredicted RBP6.17□□□□□ -1.42
ATG4A-205ENST00000394892 TRAV12-3A0A0B4J271 114 aa6.17□□□□□ -1.42
ATG4A-205ENST00000394892 CBY3A6NI87 242 aa6.17□□□□□ -1.42
ATG4A-205ENST00000394892 KLLNB2CW77 178 aa6.17□□□□□ -1.42
ATG4A-205ENST00000394892 E5RGE8 158 aa6.17□□□□□ -1.42
ATG4A-205ENST00000394892 F5H768 121 aa6.17□□□□□ -1.42
ATG4A-205ENST00000394892 H7BYZ3 331 aa6.17□□□□□ -1.42
ATG4A-205ENST00000394892 IGKV2D-40P01614 121 aaPredicted RBP6.17□□□□□ -1.42
ATG4A-205ENST00000394892 HBG1P69891 147 aa6.17□□□□□ -1.42
ATG4A-205ENST00000394892 HBG2P69892 147 aa6.17□□□□□ -1.42
ATG4A-205ENST00000394892 GUK1Q16774 197 aa6.17□□□□□ -1.42
ATG4A-205ENST00000394892 RNF212Q495C1 297 aa6.17□□□□□ -1.42
ATG4A-205ENST00000394892 LCE2AQ5TA79 106 aaPredicted RBP6.17□□□□□ -1.42
ATG4A-205ENST00000394892 ZFAND2AQ8N6M9 145 aa6.17□□□□□ -1.42
ATG4A-205ENST00000394892 C11orf72Q8NBR9 251 aa6.17□□□□□ -1.42
ATG4A-205ENST00000394892 OR10J6PQ8NGY7 276 aa6.17□□□□□ -1.42
ATG4A-205ENST00000394892 ZNRF2Q8NHG8 242 aa6.17□□□□□ -1.42
ATG4A-205ENST00000394892 TMEM263Q8WUH6 116 aaKnown RBP6.17□□□□□ -1.42
ATG4A-205ENST00000394892 RNF141Q8WVD5 230 aa6.17□□□□□ -1.42
ATG4A-205ENST00000394892 PPP1R1CQ8WVI7 109 aa6.17□□□□□ -1.42
ATG4A-205ENST00000394892 FXYD5Q96DB9 178 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms