RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 FAM106CPP0CH98 169 aa11.88□□□□□ -0.51
CPSF7-202ENST00000394888 FAM106AQ4KMX7 169 aa11.88□□□□□ -0.51
CPSF7-202ENST00000394888 ATOH7Q8N100 152 aa11.88□□□□□ -0.51
CPSF7-202ENST00000394888 MRPL52Q86TS9 123 aaKnown RBP11.87□□□□□ -0.51
CPSF7-202ENST00000394888 TXN2Q99757 166 aa11.87□□□□□ -0.51
CPSF7-202ENST00000394888 A0A087X0K7 114 aa11.86□□□□□ -0.51
CPSF7-202ENST00000394888 TRAV8-2A0A0B4J237 113 aa11.86□□□□□ -0.51
CPSF7-202ENST00000394888 CHEK1O14757 476 aa11.86□□□□□ -0.51
CPSF7-202ENST00000394888 BUB3O43684 328 aa11.86□□□□□ -0.51
CPSF7-202ENST00000394888 SPATA45Q537H7 98 aa11.86□□□□□ -0.51
CPSF7-202ENST00000394888 SH2D1AO60880 128 aa11.86□□□□□ -0.51
CPSF7-202ENST00000394888 NTF3P20783 257 aa11.86□□□□□ -0.51
CPSF7-202ENST00000394888 C15orf32Q32M92 178 aa11.86□□□□□ -0.51
CPSF7-202ENST00000394888 ARL6IP6Q8N6S5 226 aa11.86□□□□□ -0.51
CPSF7-202ENST00000394888 PRR25Q96S07 402 aa11.86□□□□□ -0.51
CPSF7-202ENST00000394888 UBR5O95071 2799 aaPredicted RBP11.85□□□□□ -0.51
CPSF7-202ENST00000394888 Q56UQ5 140 aa11.85□□□□□ -0.51
CPSF7-202ENST00000394888 RNASEKQ6P5S7 137 aaKnown RBP11.85□□□□□ -0.51
CPSF7-202ENST00000394888 Q8TAT8 98 aa11.85□□□□□ -0.51
CPSF7-202ENST00000394888 U3KQE9 123 aa11.85□□□□□ -0.51
CPSF7-202ENST00000394888 USP9XQ93008 2570 aaPredicted RBP11.85□□□□□ -0.51
CPSF7-202ENST00000394888 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.85□□□□□ -0.51
CPSF7-202ENST00000394888 IGHV3-35A0A0C4DH35 117 aa11.85□□□□□ -0.51
CPSF7-202ENST00000394888 IGLC6P0CF74 106 aa11.85□□□□□ -0.51
CPSF7-202ENST00000394888 CRIP2P52943 208 aaPredicted RBP11.85□□□□□ -0.51
CPSF7-202ENST00000394888 LOXL1Q08397 574 aaPredicted RBP11.85□□□□□ -0.51
CPSF7-202ENST00000394888 FOXE3Q13461 319 aa11.85□□□□□ -0.51
CPSF7-202ENST00000394888 TMEM213A2RRL7 107 aa11.84□□□□□ -0.51
CPSF7-202ENST00000394888 NPFFO15130 113 aa11.84□□□□□ -0.51
CPSF7-202ENST00000394888 IGLL1P15814 213 aa11.84□□□□□ -0.51
CPSF7-202ENST00000394888 CHCHD1Q96BP2 118 aaKnown RBP11.84□□□□□ -0.51
CPSF7-202ENST00000394888 RNF24Q9Y225 148 aa11.84□□□□□ -0.51
CPSF7-202ENST00000394888 M0R143 59 aa11.84□□□□□ -0.51
CPSF7-202ENST00000394888 M0R2Z0 102 aa11.84□□□□□ -0.51
CPSF7-202ENST00000394888 A0A1B0GUT8 65 aa11.83□□□□□ -0.51
CPSF7-202ENST00000394888 Q6ZQT7 251 aa11.83□□□□□ -0.51
CPSF7-202ENST00000394888 C11orf21Q9P2W6 132 aa11.83□□□□□ -0.52
CPSF7-202ENST00000394888 GAS8-AS1O95177 125 aa11.83□□□□□ -0.52
CPSF7-202ENST00000394888 BTF3P20290 206 aaKnown RBP11.83□□□□□ -0.52
CPSF7-202ENST00000394888 GPR183P32249 361 aa11.83□□□□□ -0.52
CPSF7-202ENST00000394888 GPHB5Q86YW7 130 aa11.83□□□□□ -0.52
CPSF7-202ENST00000394888 LINC00614P0C842 121 aa11.82□□□□□ -0.52
CPSF7-202ENST00000394888 RHOGP84095 191 aa11.82□□□□□ -0.52
CPSF7-202ENST00000394888 LYZL1Q6UWQ5 148 aa11.82□□□□□ -0.52
CPSF7-202ENST00000394888 RNF182Q8N6D2 247 aa11.82□□□□□ -0.52
CPSF7-202ENST00000394888 TMUB1Q9BVT8 246 aa11.82□□□□□ -0.52
CPSF7-202ENST00000394888 IGHV4-61A0A0C4DH41 118 aa11.82□□□□□ -0.52
CPSF7-202ENST00000394888 CLEC3BP05452 202 aa11.81□□□□□ -0.52
CPSF7-202ENST00000394888 ERCC8Q13216 396 aa11.81□□□□□ -0.52
CPSF7-202ENST00000394888 ZNF705AQ6ZN79 300 aaPredicted RBP11.81□□□□□ -0.52
CPSF7-202ENST00000394888 CNFNQ9BYD5 112 aa11.81□□□□□ -0.52
CPSF7-202ENST00000394888 HSBP1O75506 76 aa11.81□□□□□ -0.52
CPSF7-202ENST00000394888 DAZAP1Q96EP5 407 aaKnown RBP11.81□□□□□ -0.52
CPSF7-202ENST00000394888 RNF185Q96GF1 192 aa11.81□□□□□ -0.52
CPSF7-202ENST00000394888 RABAC1Q9UI14 185 aa11.81□□□□□ -0.52
CPSF7-202ENST00000394888 AKAP6Q13023 2319 aa11.81□□□□□ -0.52
CPSF7-202ENST00000394888 SYS1-DBNDD2H3BUS1 97 aa11.81□□□□□ -0.52
CPSF7-202ENST00000394888 NCR2O95944 276 aa11.81□□□□□ -0.52
CPSF7-202ENST00000394888 TMEM219Q86XT9 240 aa11.81□□□□□ -0.52
CPSF7-202ENST00000394888 PSG9Q00887 426 aa11.8□□□□□ -0.52
CPSF7-202ENST00000394888 ECSCRQ19T08 205 aa11.8□□□□□ -0.52
CPSF7-202ENST00000394888 DMRTA1Q5VZB9 504 aa11.8□□□□□ -0.52
CPSF7-202ENST00000394888 UNQ5815/PRO19632Q6UWF5 114 aa11.8□□□□□ -0.52
CPSF7-202ENST00000394888 STPG4Q8N801 248 aa11.8□□□□□ -0.52
CPSF7-202ENST00000394888 MCRIP2Q9BUT9 160 aaKnown RBP11.8□□□□□ -0.52
CPSF7-202ENST00000394888 SERTM2A0A1B0GWG4 89 aa11.8□□□□□ -0.52
CPSF7-202ENST00000394888 RPL7P18124 248 aaKnown RBP11.8□□□□□ -0.52
CPSF7-202ENST00000394888 SRSF2Q01130 221 aaKnown RBP11.8□□□□□ -0.52
CPSF7-202ENST00000394888 LPAR2Q9HBW0 351 aa11.8□□□□□ -0.52
CPSF7-202ENST00000394888 Q6ZS46 218 aa11.79□□□□□ -0.52
CPSF7-202ENST00000394888 TRAV9-2A0A087WT02 112 aa11.79□□□□□ -0.52
CPSF7-202ENST00000394888 SSTP61278 116 aa11.79□□□□□ -0.52
CPSF7-202ENST00000394888 FAM162BQ5T6X4 162 aa11.79□□□□□ -0.52
CPSF7-202ENST00000394888 MSRB1Q9NZV6 116 aa11.79□□□□□ -0.52
CPSF7-202ENST00000394888 CACNA1BQ00975 2339 aa11.79□□□□□ -0.52
CPSF7-202ENST00000394888 LINC01546A6NGU7 62 aa11.79□□□□□ -0.52
CPSF7-202ENST00000394888 TRBV12-3P01733 135 aa11.79□□□□□ -0.52
CPSF7-202ENST00000394888 THYN1Q9P016 225 aa11.79□□□□□ -0.52
CPSF7-202ENST00000394888 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.78□□□□□ -0.52
CPSF7-202ENST00000394888 IGHV4-38-2P0DP08 117 aa11.78□□□□□ -0.52
CPSF7-202ENST00000394888 AMN1Q8IY45 258 aa11.78□□□□□ -0.52
CPSF7-202ENST00000394888 IGHV3OR16-10A0A075B7F0 116 aa11.78□□□□□ -0.52
CPSF7-202ENST00000394888 IGHV3-66A0A0C4DH42 116 aa11.78□□□□□ -0.52
CPSF7-202ENST00000394888 TMEM70Q9BUB7 260 aa11.78□□□□□ -0.52
CPSF7-202ENST00000394888 MEGF9Q9H1U4 602 aa11.78□□□□□ -0.52
CPSF7-202ENST00000394888 MUC21A0A0G2JKD1 596 aa11.78□□□□□ -0.52
CPSF7-202ENST00000394888 MUC21A0A140T8X8 626 aa11.78□□□□□ -0.52
CPSF7-202ENST00000394888 PPIFP30405 207 aaKnown RBP11.78□□□□□ -0.52
CPSF7-202ENST00000394888 TSPOP30536 169 aa11.78□□□□□ -0.52
CPSF7-202ENST00000394888 RELQ04864 619 aaPredicted RBP11.78□□□□□ -0.52
CPSF7-202ENST00000394888 MUC21Q5SSG8 566 aa11.78□□□□□ -0.52
CPSF7-202ENST00000394888 FAM104BQ5XKR9 115 aa11.78□□□□□ -0.52
CPSF7-202ENST00000394888 CLEC19AQ6UXS0 136 aa11.78□□□□□ -0.52
CPSF7-202ENST00000394888 C10orf105Q8TEF2 133 aa11.78□□□□□ -0.52
CPSF7-202ENST00000394888 IGKV3D-20A0A0C4DH25 116 aa11.77□□□□□ -0.53
CPSF7-202ENST00000394888 BORCS7Q96B45 105 aa11.77□□□□□ -0.53
CPSF7-202ENST00000394888 C20orf173Q96LM9 149 aa11.77□□□□□ -0.53
CPSF7-202ENST00000394888 AAMDCQ9H7C9 122 aa11.77□□□□□ -0.53
CPSF7-202ENST00000394888 TCAPO15273 167 aa11.77□□□□□ -0.53
CPSF7-202ENST00000394888 MRPL51Q4U2R6 128 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms