RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 LINC01548A6NM66 108 aa11.91□□□□□ -0.5
UBE2D3-207ENST00000394801 CLEC3BP05452 202 aa11.91□□□□□ -0.5
UBE2D3-207ENST00000394801 KLHDC1Q8N7A1 406 aa11.91□□□□□ -0.5
UBE2D3-207ENST00000394801 NDFIP1Q9BT67 221 aa11.91□□□□□ -0.5
UBE2D3-207ENST00000394801 ZFAND3Q9H8U3 227 aa11.91□□□□□ -0.5
UBE2D3-207ENST00000394801 GPR183P32249 361 aa11.9□□□□□ -0.5
UBE2D3-207ENST00000394801 RAB9AP51151 201 aa11.9□□□□□ -0.5
UBE2D3-207ENST00000394801 FAM162BQ5T6X4 162 aa11.9□□□□□ -0.5
UBE2D3-207ENST00000394801 FAM19A2Q8N3H0 131 aa11.9□□□□□ -0.5
UBE2D3-207ENST00000394801 STPG4Q8N801 248 aa11.9□□□□□ -0.5
UBE2D3-207ENST00000394801 GATD1Q8NB37 220 aa11.9□□□□□ -0.5
UBE2D3-207ENST00000394801 PIMREGQ9BSJ6 248 aa11.9□□□□□ -0.5
UBE2D3-207ENST00000394801 LAMTOR2Q9Y2Q5 125 aa11.9□□□□□ -0.5
UBE2D3-207ENST00000394801 NDUFS8O00217 210 aa11.9□□□□□ -0.51
UBE2D3-207ENST00000394801 TCF21O43680 179 aa11.9□□□□□ -0.51
UBE2D3-207ENST00000394801 C3orf79P0CE67 100 aa11.9□□□□□ -0.51
UBE2D3-207ENST00000394801 HNRNPA3P51991 378 aaKnown RBP11.9□□□□□ -0.51
UBE2D3-207ENST00000394801 PIFOQ8TCI5 191 aa11.9□□□□□ -0.51
UBE2D3-207ENST00000394801 C10orf105Q8TEF2 133 aa11.9□□□□□ -0.51
UBE2D3-207ENST00000394801 ORAOV1Q8WV07 137 aa11.9□□□□□ -0.51
UBE2D3-207ENST00000394801 ABCA2Q9BZC7 2435 aa11.89□□□□□ -0.51
UBE2D3-207ENST00000394801 IGHV1-69DA0A0B4J2H0 117 aa11.89□□□□□ -0.51
UBE2D3-207ENST00000394801 IGHV4-61A0A0C4DH41 118 aa11.89□□□□□ -0.51
UBE2D3-207ENST00000394801 A0A1B0GUT8 65 aa11.89□□□□□ -0.51
UBE2D3-207ENST00000394801 G3V318 75 aa11.89□□□□□ -0.51
UBE2D3-207ENST00000394801 HSBP1O75506 76 aa11.89□□□□□ -0.51
UBE2D3-207ENST00000394801 IGHV1-69P01742 117 aa11.89□□□□□ -0.51
UBE2D3-207ENST00000394801 IGHG4P01861 327 aa11.89□□□□□ -0.51
UBE2D3-207ENST00000394801 Q6AWC8 147 aa11.89□□□□□ -0.51
UBE2D3-207ENST00000394801 Q6ZN92 141 aa11.89□□□□□ -0.51
UBE2D3-207ENST00000394801 URB1-AS1Q96HZ7 61 aa11.89□□□□□ -0.51
UBE2D3-207ENST00000394801 CCDC140Q96MF4 163 aa11.89□□□□□ -0.51
UBE2D3-207ENST00000394801 MEGF9Q9H1U4 602 aa11.89□□□□□ -0.51
UBE2D3-207ENST00000394801 SPTAN1Q13813 2472 aaKnown RBP11.89□□□□□ -0.51
UBE2D3-207ENST00000394801 LOC102724200A0A096LPH7 203 aaPredicted RBP11.89□□□□□ -0.51
UBE2D3-207ENST00000394801 BUB3O43684 328 aa11.89□□□□□ -0.51
UBE2D3-207ENST00000394801 CT45A10P0DMU9 189 aa11.89□□□□□ -0.51
UBE2D3-207ENST00000394801 CRIP2P52943 208 aaPredicted RBP11.89□□□□□ -0.51
UBE2D3-207ENST00000394801 SAPCD1Q5SSQ6 148 aa11.89□□□□□ -0.51
UBE2D3-207ENST00000394801 C8orf49Q96NF6 230 aa11.89□□□□□ -0.51
UBE2D3-207ENST00000394801 CCL19Q99731 98 aa11.89□□□□□ -0.51
UBE2D3-207ENST00000394801 ASCL2Q99929 193 aa11.89□□□□□ -0.51
UBE2D3-207ENST00000394801 A0A087X0K7 114 aa11.88□□□□□ -0.51
UBE2D3-207ENST00000394801 TRBV7-1A0A0A6YYK4 115 aa11.88□□□□□ -0.51
UBE2D3-207ENST00000394801 A0A1B0GW15 77 aa11.88□□□□□ -0.51
UBE2D3-207ENST00000394801 CHEK1O14757 476 aa11.88□□□□□ -0.51
UBE2D3-207ENST00000394801 PCP4P48539 62 aa11.88□□□□□ -0.51
UBE2D3-207ENST00000394801 BORCS7Q96B45 105 aa11.88□□□□□ -0.51
UBE2D3-207ENST00000394801 ATP6V0BQ99437 205 aa11.88□□□□□ -0.51
UBE2D3-207ENST00000394801 MOB4Q9Y3A3 225 aa11.88□□□□□ -0.51
UBE2D3-207ENST00000394801 COL12A1Q99715 3063 aa11.88□□□□□ -0.51
UBE2D3-207ENST00000394801 NTF3P20783 257 aa11.87□□□□□ -0.51
UBE2D3-207ENST00000394801 RIGQ13278 110 aa11.87□□□□□ -0.51
UBE2D3-207ENST00000394801 C19orf54Q5BKX5 351 aa11.87□□□□□ -0.51
UBE2D3-207ENST00000394801 PRR25Q96S07 402 aa11.87□□□□□ -0.51
UBE2D3-207ENST00000394801 MRPS16Q9Y3D3 137 aaKnown RBP11.87□□□□□ -0.51
UBE2D3-207ENST00000394801 C20orf202A1L168 122 aa11.87□□□□□ -0.51
UBE2D3-207ENST00000394801 PMCHL1Q16048 86 aa11.87□□□□□ -0.51
UBE2D3-207ENST00000394801 EEF1AKMT3Q96AZ1 226 aa11.87□□□□□ -0.51
UBE2D3-207ENST00000394801 IGSF10Q6WRI0 2623 aa11.87□□□□□ -0.51
UBE2D3-207ENST00000394801 FASNP49327 2511 aaKnown RBP11.87□□□□□ -0.51
UBE2D3-207ENST00000394801 VPS13CQ709C8 3753 aa11.87□□□□□ -0.51
UBE2D3-207ENST00000394801 IGHV3-35A0A0C4DH35 117 aa11.86□□□□□ -0.51
UBE2D3-207ENST00000394801 CLPSL1A2RUU4 121 aa11.86□□□□□ -0.51
UBE2D3-207ENST00000394801 ARMS2P0C7Q2 107 aa11.86□□□□□ -0.51
UBE2D3-207ENST00000394801 CHCHD1Q96BP2 118 aaKnown RBP11.86□□□□□ -0.51
UBE2D3-207ENST00000394801 IGKV2-40A0A087WW87 121 aaPredicted RBP11.86□□□□□ -0.51
UBE2D3-207ENST00000394801 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.86□□□□□ -0.51
UBE2D3-207ENST00000394801 IGKV2D-40P01614 121 aaPredicted RBP11.86□□□□□ -0.51
UBE2D3-207ENST00000394801 PRB4P10163 310 aaPredicted RBP11.86□□□□□ -0.51
UBE2D3-207ENST00000394801 CLEC19AQ6UXS0 136 aa11.86□□□□□ -0.51
UBE2D3-207ENST00000394801 DOPEY1Q5JWR5 2465 aa11.86□□□□□ -0.51
UBE2D3-207ENST00000394801 M0R2Z0 102 aa11.85□□□□□ -0.51
UBE2D3-207ENST00000394801 RNASEKQ6P5S7 137 aaKnown RBP11.85□□□□□ -0.51
UBE2D3-207ENST00000394801 FLNCQ14315 2725 aa11.85□□□□□ -0.51
UBE2D3-207ENST00000394801 IGHV3OR16-8A0A075B7F1 116 aa11.85□□□□□ -0.51
UBE2D3-207ENST00000394801 FAM181BA6NEQ2 426 aa11.85□□□□□ -0.51
UBE2D3-207ENST00000394801 TSPOP30536 169 aa11.85□□□□□ -0.51
UBE2D3-207ENST00000394801 PRR31Q5SQ13 230 aa11.85□□□□□ -0.51
UBE2D3-207ENST00000394801 LCN12Q6JVE5 192 aa11.85□□□□□ -0.51
UBE2D3-207ENST00000394801 CLEC2AQ6UVW9 174 aa11.85□□□□□ -0.51
UBE2D3-207ENST00000394801 TMEM219Q86XT9 240 aa11.85□□□□□ -0.51
UBE2D3-207ENST00000394801 TRAV41A0A0B4J266 112 aa11.84□□□□□ -0.51
UBE2D3-207ENST00000394801 SH2D1AO60880 128 aa11.84□□□□□ -0.51
UBE2D3-207ENST00000394801 PTTG1IPP53801 180 aa11.84□□□□□ -0.51
UBE2D3-207ENST00000394801 IGHV3OR16-10A0A075B7F0 116 aa11.84□□□□□ -0.51
UBE2D3-207ENST00000394801 TRAV40A0A0B4J280 105 aa11.84□□□□□ -0.51
UBE2D3-207ENST00000394801 C2orf70A6NJV1 201 aa11.84□□□□□ -0.51
UBE2D3-207ENST00000394801 C21orf62-AS1Q17RA5 79 aa11.84□□□□□ -0.51
UBE2D3-207ENST00000394801 BRD3OSQ6XYD6 125 aa11.84□□□□□ -0.51
UBE2D3-207ENST00000394801 ZNF493Q6ZR52 646 aa11.84□□□□□ -0.51
UBE2D3-207ENST00000394801 VGLL1Q99990 258 aa11.84□□□□□ -0.51
UBE2D3-207ENST00000394801 U3KQE9 123 aa11.84□□□□□ -0.51
UBE2D3-207ENST00000394801 TMEM189A5PLL7 270 aa11.83□□□□□ -0.52
UBE2D3-207ENST00000394801 FAM223BA6NKX1 122 aa11.83□□□□□ -0.52
UBE2D3-207ENST00000394801 CCL25O15444 150 aa11.83□□□□□ -0.52
UBE2D3-207ENST00000394801 HLA-DMBP28068 263 aa11.83□□□□□ -0.52
UBE2D3-207ENST00000394801 ATP5J2P56134 94 aa11.83□□□□□ -0.52
UBE2D3-207ENST00000394801 ATP5G2Q06055 141 aa11.83□□□□□ -0.52
UBE2D3-207ENST00000394801 EBLN2Q6P2I7 272 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms