RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 SERTAD4Q9NUC0 356 aa11.44□□□□□ -0.58
CCT4-201ENST00000394440 SMIM27A0A1W2PRY6 76 aa11.44□□□□□ -0.58
CCT4-201ENST00000394440 HIST1H2BKO60814 126 aa11.44□□□□□ -0.58
CCT4-201ENST00000394440 HIST1H2BJP06899 126 aa11.44□□□□□ -0.58
CCT4-201ENST00000394440 HIST1H2BOP23527 126 aa11.44□□□□□ -0.58
CCT4-201ENST00000394440 HIST1H2BBP33778 126 aa11.44□□□□□ -0.58
CCT4-201ENST00000394440 HIST1H2BDP58876 126 aa11.44□□□□□ -0.58
CCT4-201ENST00000394440 HIST1H2BCP62807 126 aa11.44□□□□□ -0.58
CCT4-201ENST00000394440 SLC35B1P78383 322 aa11.44□□□□□ -0.58
CCT4-201ENST00000394440 HIST2H2BEQ16778 126 aa11.44□□□□□ -0.58
CCT4-201ENST00000394440 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.44□□□□□ -0.58
CCT4-201ENST00000394440 PRR27Q6MZM9 219 aa11.44□□□□□ -0.58
CCT4-201ENST00000394440 FRZBQ92765 325 aa11.44□□□□□ -0.58
CCT4-201ENST00000394440 HIST1H2BHQ93079 126 aa11.44□□□□□ -0.58
CCT4-201ENST00000394440 HIST1H2BNQ99877 126 aa11.44□□□□□ -0.58
CCT4-201ENST00000394440 HIST1H2BMQ99879 126 aa11.44□□□□□ -0.58
CCT4-201ENST00000394440 SLC50A1Q9BRV3 221 aa11.44□□□□□ -0.58
CCT4-201ENST00000394440 PSG8Q9UQ74 426 aa11.44□□□□□ -0.58
CCT4-201ENST00000394440 ZNF785A8K8V0 405 aa11.43□□□□□ -0.58
CCT4-201ENST00000394440 ZNF705GA8MUZ8 300 aaPredicted RBP11.43□□□□□ -0.58
CCT4-201ENST00000394440 RPLP1P05386 114 aaKnown RBP11.43□□□□□ -0.58
CCT4-201ENST00000394440 HLA-DMBP28068 263 aa11.43□□□□□ -0.58
CCT4-201ENST00000394440 ANKRD39Q53RE8 183 aa11.43□□□□□ -0.58
CCT4-201ENST00000394440 PRNTQ86SH4 94 aa11.43□□□□□ -0.58
CCT4-201ENST00000394440 ZFP30Q9Y2G7 519 aa11.43□□□□□ -0.58
CCT4-201ENST00000394440 TMEM238LA0A1B0GVL6 79 aa11.43□□□□□ -0.58
CCT4-201ENST00000394440 GATCO43716 136 aaKnown RBP11.43□□□□□ -0.58
CCT4-201ENST00000394440 CSN1S1P47710 185 aa11.43□□□□□ -0.58
CCT4-201ENST00000394440 MEOX2P50222 304 aa11.43□□□□□ -0.58
CCT4-201ENST00000394440 CHEK1O14757 476 aa11.42□□□□□ -0.58
CCT4-201ENST00000394440 SNRPEP62304 92 aaKnown RBP11.42□□□□□ -0.58
CCT4-201ENST00000394440 ACTL10Q5JWF8 245 aa11.42□□□□□ -0.58
CCT4-201ENST00000394440 IGFL4Q6B9Z1 124 aa11.42□□□□□ -0.58
CCT4-201ENST00000394440 ANK3Q12955 4377 aaKnown RBP11.42□□□□□ -0.58
CCT4-201ENST00000394440 CA1P00915 261 aaPredicted RBP11.42□□□□□ -0.58
CCT4-201ENST00000394440 TRGC1P0CF51 173 aa11.42□□□□□ -0.58
CCT4-201ENST00000394440 PRB4P10163 310 aaPredicted RBP11.42□□□□□ -0.58
CCT4-201ENST00000394440 SAV1Q9H4B6 383 aaPredicted RBP11.42□□□□□ -0.58
CCT4-201ENST00000394440 YAE1D1Q9NRH1 226 aa11.42□□□□□ -0.58
CCT4-201ENST00000394440 TRAV8-2A0A0B4J237 113 aa11.41□□□□□ -0.58
CCT4-201ENST00000394440 DNAJC9-AS1A6NH13 148 aa11.41□□□□□ -0.58
CCT4-201ENST00000394440 NPIPB6E9PJ23 425 aa11.41□□□□□ -0.58
CCT4-201ENST00000394440 S100A6P06703 90 aa11.41□□□□□ -0.58
CCT4-201ENST00000394440 GPHB5Q86YW7 130 aa11.41□□□□□ -0.58
CCT4-201ENST00000394440 GRAMD2BQ96HH9 432 aa11.41□□□□□ -0.58
CCT4-201ENST00000394440 IGKV2-40A0A087WW87 121 aaPredicted RBP11.41□□□□□ -0.58
CCT4-201ENST00000394440 IGKV2D-40P01614 121 aaPredicted RBP11.41□□□□□ -0.58
CCT4-201ENST00000394440 RIPPLY3P57055 190 aa11.41□□□□□ -0.58
CCT4-201ENST00000394440 C8orf86Q6ZUL3 223 aa11.41□□□□□ -0.58
CCT4-201ENST00000394440 ZC2HC1AQ96GY0 325 aa11.41□□□□□ -0.58
CCT4-201ENST00000394440 HIVEP1P15822 2718 aa11.41□□□□□ -0.58
CCT4-201ENST00000394440 FBLL1A6NHQ2 334 aaKnown RBP11.4□□□□□ -0.58
CCT4-201ENST00000394440 K7EMT4 169 aa11.4□□□□□ -0.58
CCT4-201ENST00000394440 UBE2CO00762 179 aa11.4□□□□□ -0.58
CCT4-201ENST00000394440 LGALS1P09382 135 aaKnown RBP11.4□□□□□ -0.58
CCT4-201ENST00000394440 CT83Q5H943 113 aa11.4□□□□□ -0.58
CCT4-201ENST00000394440 LCN12Q6JVE5 192 aa11.4□□□□□ -0.58
CCT4-201ENST00000394440 COX8CQ7Z4L0 72 aa11.4□□□□□ -0.58
CCT4-201ENST00000394440 UBE2E2Q96LR5 201 aa11.4□□□□□ -0.58
CCT4-201ENST00000394440 ESM1Q9NQ30 184 aa11.4□□□□□ -0.58
CCT4-201ENST00000394440 DAZ1Q9NQZ3 744 aaKnown RBP11.4□□□□□ -0.58
CCT4-201ENST00000394440 IGHV7-4-1A0A0J9YVY3 117 aa11.4□□□□□ -0.59
CCT4-201ENST00000394440 ZNF705FA8MVS1 300 aaPredicted RBP11.4□□□□□ -0.59
CCT4-201ENST00000394440 MRPL53Q96EL3 112 aaKnown RBP11.4□□□□□ -0.59
CCT4-201ENST00000394440 A0A1W2PS18 150 aa11.39□□□□□ -0.59
CCT4-201ENST00000394440 TCL1AP56279 114 aa11.39□□□□□ -0.59
CCT4-201ENST00000394440 TSKUQ8WUA8 353 aa11.39□□□□□ -0.59
CCT4-201ENST00000394440 RPP21Q9H633 154 aaKnown RBP11.39□□□□□ -0.59
CCT4-201ENST00000394440 TM4SF20Q53R12 229 aa11.39□□□□□ -0.59
CCT4-201ENST00000394440 GBGT1Q8N5D6 347 aa11.39□□□□□ -0.59
CCT4-201ENST00000394440 RNF182Q8N6D2 247 aa11.39□□□□□ -0.59
CCT4-201ENST00000394440 ASCL2Q99929 193 aa11.39□□□□□ -0.59
CCT4-201ENST00000394440 TMEM160Q9NX00 188 aa11.39□□□□□ -0.59
CCT4-201ENST00000394440 FAM181BA6NEQ2 426 aa11.38□□□□□ -0.59
CCT4-201ENST00000394440 P01737 135 aa11.38□□□□□ -0.59
CCT4-201ENST00000394440 FRMD6-AS1P0C7T7 363 aa11.38□□□□□ -0.59
CCT4-201ENST00000394440 FAM106AQ4KMX7 169 aa11.38□□□□□ -0.59
CCT4-201ENST00000394440 Q6ZSV7 163 aa11.38□□□□□ -0.59
CCT4-201ENST00000394440 VGLL1Q99990 258 aa11.38□□□□□ -0.59
CCT4-201ENST00000394440 RBAKDNA6NC62 111 aa11.38□□□□□ -0.59
CCT4-201ENST00000394440 IZUMO1RA6ND01 250 aa11.38□□□□□ -0.59
CCT4-201ENST00000394440 PRAC2D3DTV9 90 aa11.38□□□□□ -0.59
CCT4-201ENST00000394440 SOCS3O14543 225 aa11.38□□□□□ -0.59
CCT4-201ENST00000394440 FABP9Q0Z7S8 132 aa11.38□□□□□ -0.59
CCT4-201ENST00000394440 MAJINQ3KP22 176 aa11.38□□□□□ -0.59
CCT4-201ENST00000394440 C8orf49Q96NF6 230 aa11.38□□□□□ -0.59
CCT4-201ENST00000394440 SMPXQ9UHP9 88 aa11.38□□□□□ -0.59
CCT4-201ENST00000394440 CRIP1P50238 77 aa11.37□□□□□ -0.59
CCT4-201ENST00000394440 KLHDC1Q8N7A1 406 aa11.37□□□□□ -0.59
CCT4-201ENST00000394440 OR4B1Q8NGF8 309 aa11.37□□□□□ -0.59
CCT4-201ENST00000394440 PRR25Q96S07 402 aa11.37□□□□□ -0.59
CCT4-201ENST00000394440 NEU1Q99519 415 aa11.37□□□□□ -0.59
CCT4-201ENST00000394440 RHPN1-AS1Q9BWJ2 59 aa11.37□□□□□ -0.59
CCT4-201ENST00000394440 CLEC5AQ9NY25 188 aa11.37□□□□□ -0.59
CCT4-201ENST00000394440 NUP35Q8NFH5 326 aa11.37□□□□□ -0.59
CCT4-201ENST00000394440 NAT8BQ9UHF3 227 aa11.37□□□□□ -0.59
CCT4-201ENST00000394440 TRAPPC1Q9Y5R8 145 aa11.37□□□□□ -0.59
CCT4-201ENST00000394440 A8MWP6 167 aa11.36□□□□□ -0.59
CCT4-201ENST00000394440 EDN2P20800 178 aa11.36□□□□□ -0.59
CCT4-201ENST00000394440 DAZAP1Q96EP5 407 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms