RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 SAT2Q96F10 170 aaPredicted RBP12.16□□□□□ -0.46
SNRPA1-202ENST00000394082 Q9H3A6 140 aa12.16□□□□□ -0.46
SNRPA1-202ENST00000394082 FLVCR2Q9UPI3 526 aa12.16□□□□□ -0.46
SNRPA1-202ENST00000394082 C7orf66A4D0T2 115 aa12.15□□□□□ -0.46
SNRPA1-202ENST00000394082 COX7A2P2O60397 106 aa12.15□□□□□ -0.46
SNRPA1-202ENST00000394082 ARL16Q0P5N6 197 aa12.15□□□□□ -0.46
SNRPA1-202ENST00000394082 ZNF846Q147U1 533 aa12.15□□□□□ -0.46
SNRPA1-202ENST00000394082 GFI1BQ5VTD9 330 aa12.15□□□□□ -0.46
SNRPA1-202ENST00000394082 TRAV26-1A0A087WT03 109 aa12.14□□□□□ -0.47
SNRPA1-202ENST00000394082 PLA2G10O15496 165 aa12.14□□□□□ -0.47
SNRPA1-202ENST00000394082 ZNF253O75346 499 aa12.14□□□□□ -0.47
SNRPA1-202ENST00000394082 RLN2P04090 185 aa12.14□□□□□ -0.47
SNRPA1-202ENST00000394082 DAZ2Q13117 558 aaKnown RBP12.14□□□□□ -0.47
SNRPA1-202ENST00000394082 RAB31Q13636 194 aa12.14□□□□□ -0.47
SNRPA1-202ENST00000394082 C18orf15Q96N68 181 aa12.14□□□□□ -0.47
SNRPA1-202ENST00000394082 MGST2Q99735 147 aa12.14□□□□□ -0.47
SNRPA1-202ENST00000394082 PYGO2Q9BRQ0 406 aa12.14□□□□□ -0.47
SNRPA1-202ENST00000394082 SNURFLB1AK76 121 aa12.13□□□□□ -0.47
SNRPA1-202ENST00000394082 SLC17A3O00476 420 aa12.13□□□□□ -0.47
SNRPA1-202ENST00000394082 SCGB1D2O95969 90 aa12.13□□□□□ -0.47
SNRPA1-202ENST00000394082 MBPP02686 304 aaPredicted RBP12.13□□□□□ -0.47
SNRPA1-202ENST00000394082 OR5I1Q13606 314 aa12.13□□□□□ -0.47
SNRPA1-202ENST00000394082 KIR3DS1Q14943 382 aa12.13□□□□□ -0.47
SNRPA1-202ENST00000394082 OPCMLQ14982 345 aa12.13□□□□□ -0.47
SNRPA1-202ENST00000394082 C10orf113Q5VZT2 155 aa12.13□□□□□ -0.47
SNRPA1-202ENST00000394082 MZT2BQ6NZ67 158 aa12.13□□□□□ -0.47
SNRPA1-202ENST00000394082 Q6ZRG5 221 aa12.13□□□□□ -0.47
SNRPA1-202ENST00000394082 C20orf85Q9H1P6 137 aa12.13□□□□□ -0.47
SNRPA1-202ENST00000394082 DNAJC4Q9NNZ3 241 aa12.13□□□□□ -0.47
SNRPA1-202ENST00000394082 APOBP04114 4563 aaKnown RBP12.12□□□□□ -0.47
SNRPA1-202ENST00000394082 PRAC2D3DTV9 90 aa12.12□□□□□ -0.47
SNRPA1-202ENST00000394082 NPIPB6E9PJ23 425 aa12.12□□□□□ -0.47
SNRPA1-202ENST00000394082 HOXA5P20719 270 aa12.12□□□□□ -0.47
SNRPA1-202ENST00000394082 LEPP41159 167 aa12.12□□□□□ -0.47
SNRPA1-202ENST00000394082 MORN5Q5VZ52 161 aa12.12□□□□□ -0.47
SNRPA1-202ENST00000394082 MRPL53Q96EL3 112 aaKnown RBP12.12□□□□□ -0.47
SNRPA1-202ENST00000394082 GSKIPQ9P0R6 139 aa12.12□□□□□ -0.47
SNRPA1-202ENST00000394082 MRPS16Q9Y3D3 137 aaKnown RBP12.12□□□□□ -0.47
SNRPA1-202ENST00000394082 DNAH5Q8TE73 4624 aa12.11□□□□□ -0.47
SNRPA1-202ENST00000394082 FAM240BA0A1B0GVZ2 78 aa12.11□□□□□ -0.47
SNRPA1-202ENST00000394082 H3BQ15 152 aa12.11□□□□□ -0.47
SNRPA1-202ENST00000394082 TCRBP04435 133 aa12.11□□□□□ -0.47
SNRPA1-202ENST00000394082 CAMLGP49069 296 aa12.11□□□□□ -0.47
SNRPA1-202ENST00000394082 MAPKAPK5-AS1Q8N8E1 139 aa12.11□□□□□ -0.47
SNRPA1-202ENST00000394082 OR1L4Q8NGR5 311 aa12.11□□□□□ -0.47
SNRPA1-202ENST00000394082 ZNF431Q8TF32 576 aaPredicted RBP12.11□□□□□ -0.47
SNRPA1-202ENST00000394082 TRAV6A0A075B6T7 132 aa12.1□□□□□ -0.47
SNRPA1-202ENST00000394082 GAGE12BA1L429 117 aa12.1□□□□□ -0.47
SNRPA1-202ENST00000394082 GAGE7O76087 117 aa12.1□□□□□ -0.47
SNRPA1-202ENST00000394082 GAGE12FP0CL80 117 aa12.1□□□□□ -0.47
SNRPA1-202ENST00000394082 GAGE12GP0CL81 117 aa12.1□□□□□ -0.47
SNRPA1-202ENST00000394082 GAGE12IP0CL82 117 aa12.1□□□□□ -0.47
SNRPA1-202ENST00000394082 CT45A10P0DMU9 189 aa12.1□□□□□ -0.47
SNRPA1-202ENST00000394082 ESRGQ1W209 222 aa12.1□□□□□ -0.47
SNRPA1-202ENST00000394082 VWC2Q2TAL6 325 aa12.1□□□□□ -0.47
SNRPA1-202ENST00000394082 Q8N1X5 172 aa12.1□□□□□ -0.47
SNRPA1-202ENST00000394082 CHAC2Q8WUX2 184 aa12.1□□□□□ -0.47
SNRPA1-202ENST00000394082 PFDN5Q99471 154 aa12.1□□□□□ -0.47
SNRPA1-202ENST00000394082 LINC00467Q9BRT7 94 aa12.1□□□□□ -0.47
SNRPA1-202ENST00000394082 KRTAP1-5Q9BYS1 174 aa12.1□□□□□ -0.47
SNRPA1-202ENST00000394082 NUDT15Q9NV35 164 aa12.1□□□□□ -0.47
SNRPA1-202ENST00000394082 L7N2F9 121 aa12.09□□□□□ -0.47
SNRPA1-202ENST00000394082 UPK1BO75841 260 aa12.09□□□□□ -0.47
SNRPA1-202ENST00000394082 SLC25A5P05141 298 aaKnown RBP12.09□□□□□ -0.47
SNRPA1-202ENST00000394082 SNRPCP09234 159 aaKnown RBP12.09□□□□□ -0.47
SNRPA1-202ENST00000394082 RPL29P47914 159 aaKnown RBP12.09□□□□□ -0.47
SNRPA1-202ENST00000394082 VAMP2P63027 116 aa12.09□□□□□ -0.47
SNRPA1-202ENST00000394082 ASAH1Q13510 395 aa12.09□□□□□ -0.47
SNRPA1-202ENST00000394082 SPATA12Q7Z6I5 190 aa12.09□□□□□ -0.47
SNRPA1-202ENST00000394082 NRARPQ7Z6K4 114 aa12.09□□□□□ -0.47
SNRPA1-202ENST00000394082 ZNF680Q8NEM1 530 aa12.09□□□□□ -0.47
SNRPA1-202ENST00000394082 PARD6GQ9BYG4 376 aaPredicted RBP12.09□□□□□ -0.47
SNRPA1-202ENST00000394082 WDR83OSQ9Y284 106 aa12.09□□□□□ -0.47
SNRPA1-202ENST00000394082 TRAV12-3A0A0B4J271 114 aa12.08□□□□□ -0.48
SNRPA1-202ENST00000394082 A0A0J9YY99 117 aa12.08□□□□□ -0.48
SNRPA1-202ENST00000394082 PRB4P10163 310 aaPredicted RBP12.08□□□□□ -0.48
SNRPA1-202ENST00000394082 C12orf45Q8N5I9 185 aaPredicted RBP12.08□□□□□ -0.48
SNRPA1-202ENST00000394082 ENKURQ8TC29 256 aa12.08□□□□□ -0.48
SNRPA1-202ENST00000394082 C11orf1Q9H5F2 150 aa12.08□□□□□ -0.48
SNRPA1-202ENST00000394082 UQCC1Q9NVA1 299 aa12.08□□□□□ -0.48
SNRPA1-202ENST00000394082 PRELID1Q9Y255 219 aa12.08□□□□□ -0.48
SNRPA1-202ENST00000394082 KLLNB2CW77 178 aa12.07□□□□□ -0.48
SNRPA1-202ENST00000394082 H3BTX0 84 aa12.07□□□□□ -0.48
SNRPA1-202ENST00000394082 H2AFB2P0C5Z0 115 aa12.07□□□□□ -0.48
SNRPA1-202ENST00000394082 PDE6HQ13956 83 aa12.07□□□□□ -0.48
SNRPA1-202ENST00000394082 ANXA2RQ3ZCQ2 193 aa12.07□□□□□ -0.48
SNRPA1-202ENST00000394082 LINC00477Q96M19 166 aa12.07□□□□□ -0.48
SNRPA1-202ENST00000394082 ZNF586Q9NXT0 402 aa12.07□□□□□ -0.48
SNRPA1-202ENST00000394082 TMEM14CQ9P0S9 112 aa12.07□□□□□ -0.48
SNRPA1-202ENST00000394082 TRBV19A0A075B6N1 114 aa12.06□□□□□ -0.48
SNRPA1-202ENST00000394082 ZNF324O75467 553 aaPredicted RBP12.06□□□□□ -0.48
SNRPA1-202ENST00000394082 NMBP08949 121 aa12.06□□□□□ -0.48
SNRPA1-202ENST00000394082 S100A11P31949 105 aa12.06□□□□□ -0.48
SNRPA1-202ENST00000394082 CAV2P51636 162 aa12.06□□□□□ -0.48
SNRPA1-202ENST00000394082 MIC13Q5XKP0 118 aa12.06□□□□□ -0.48
SNRPA1-202ENST00000394082 Q6ZTI0 123 aa12.06□□□□□ -0.48
SNRPA1-202ENST00000394082 C11orf72Q8NBR9 251 aa12.06□□□□□ -0.48
SNRPA1-202ENST00000394082 FAM19A4Q96LR4 140 aa12.06□□□□□ -0.48
SNRPA1-202ENST00000394082 TMPRSS5Q9H3S3 457 aa12.06□□□□□ -0.48
SNRPA1-202ENST00000394082 SLC39A9Q9NUM3 307 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 250 ms