RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 CHEK1O14757 476 aa17■□□□□ 0.31
HMGA2-203ENST00000393578 TCL1AP56279 114 aa17■□□□□ 0.31
HMGA2-203ENST00000393578 FOXE3Q13461 319 aa17■□□□□ 0.31
HMGA2-203ENST00000393578 C10orf99Q6UWK7 81 aa17■□□□□ 0.31
HMGA2-203ENST00000393578 Q8N2B8 174 aa17■□□□□ 0.31
HMGA2-203ENST00000393578 DAZAP1Q96EP5 407 aaKnown RBP17■□□□□ 0.31
HMGA2-203ENST00000393578 P01737 135 aa16.99■□□□□ 0.31
HMGA2-203ENST00000393578 CT83Q5H943 113 aa16.99■□□□□ 0.31
HMGA2-203ENST00000393578 TSKUQ8WUA8 353 aa16.99■□□□□ 0.31
HMGA2-203ENST00000393578 GLMPQ8WWB7 406 aa16.99■□□□□ 0.31
HMGA2-203ENST00000393578 RPP21Q9H633 154 aaKnown RBP16.99■□□□□ 0.31
HMGA2-203ENST00000393578 CD5LO43866 347 aa16.98■□□□□ 0.31
HMGA2-203ENST00000393578 ELANEP08246 267 aa16.98■□□□□ 0.31
HMGA2-203ENST00000393578 KRTAP1-1Q07627 177 aa16.98■□□□□ 0.31
HMGA2-203ENST00000393578 IGFL4Q6B9Z1 124 aa16.98■□□□□ 0.31
HMGA2-203ENST00000393578 LCN12Q6JVE5 192 aa16.98■□□□□ 0.31
HMGA2-203ENST00000393578 TLN2Q9Y4G6 2542 aa16.98■□□□□ 0.31
HMGA2-203ENST00000393578 A0A1W2PS18 150 aa16.97■□□□□ 0.31
HMGA2-203ENST00000393578 IZUMO1RA6ND01 250 aa16.97■□□□□ 0.31
HMGA2-203ENST00000393578 HOXA5P20719 270 aa16.97■□□□□ 0.31
HMGA2-203ENST00000393578 HLA-DMBP28068 263 aa16.97■□□□□ 0.31
HMGA2-203ENST00000393578 GBGT1Q8N5D6 347 aa16.97■□□□□ 0.31
HMGA2-203ENST00000393578 ZC2HC1AQ96GY0 325 aa16.97■□□□□ 0.31
HMGA2-203ENST00000393578 DUX5Q96PT3 197 aa16.97■□□□□ 0.31
HMGA2-203ENST00000393578 IGKV2-40A0A087WW87 121 aaPredicted RBP16.97■□□□□ 0.31
HMGA2-203ENST00000393578 NPIPB6E9PJ23 425 aa16.97■□□□□ 0.31
HMGA2-203ENST00000393578 IGKV2D-40P01614 121 aaPredicted RBP16.97■□□□□ 0.31
HMGA2-203ENST00000393578 RPLP1P05386 114 aaKnown RBP16.97■□□□□ 0.31
HMGA2-203ENST00000393578 PRB4P10163 310 aaPredicted RBP16.97■□□□□ 0.31
HMGA2-203ENST00000393578 AKR1D1P51857 326 aa16.97■□□□□ 0.31
HMGA2-203ENST00000393578 MYOZ3Q8TDC0 251 aa16.97■□□□□ 0.31
HMGA2-203ENST00000393578 NAT8BQ9UHF3 227 aa16.97■□□□□ 0.31
HMGA2-203ENST00000393578 COX19Q49B96 90 aa16.96■□□□□ 0.31
HMGA2-203ENST00000393578 FAM106AQ4KMX7 169 aa16.96■□□□□ 0.31
HMGA2-203ENST00000393578 SMUG1Q53HV7 270 aa16.96■□□□□ 0.31
HMGA2-203ENST00000393578 C8orf86Q6ZUL3 223 aa16.96■□□□□ 0.31
HMGA2-203ENST00000393578 GPHB5Q86YW7 130 aa16.96■□□□□ 0.31
HMGA2-203ENST00000393578 DAZ1Q9NQZ3 744 aaKnown RBP16.96■□□□□ 0.31
HMGA2-203ENST00000393578 ZNF705FA8MVS1 300 aaPredicted RBP16.95■□□□□ 0.3
HMGA2-203ENST00000393578 A8MWL6 223 aa16.95■□□□□ 0.3
HMGA2-203ENST00000393578 CBLN1P23435 193 aa16.95■□□□□ 0.3
HMGA2-203ENST00000393578 Q71RC1 249 aaPredicted RBP16.95■□□□□ 0.3
HMGA2-203ENST00000393578 RNF152Q8N8N0 203 aa16.95■□□□□ 0.3
HMGA2-203ENST00000393578 OR4B1Q8NGF8 309 aa16.95■□□□□ 0.3
HMGA2-203ENST00000393578 GNB1LQ9BYB4 327 aa16.95■□□□□ 0.3
HMGA2-203ENST00000393578 SAPCD1Q5SSQ6 148 aa16.95■□□□□ 0.3
HMGA2-203ENST00000393578 MRPL53Q96EL3 112 aaKnown RBP16.95■□□□□ 0.3
HMGA2-203ENST00000393578 NEU1Q99519 415 aa16.95■□□□□ 0.3
HMGA2-203ENST00000393578 CLEC5AQ9NY25 188 aa16.95■□□□□ 0.3
HMGA2-203ENST00000393578 K7EMT4 169 aa16.94■□□□□ 0.3
HMGA2-203ENST00000393578 SPINK4O60575 86 aa16.94■□□□□ 0.3
HMGA2-203ENST00000393578 WDR73Q6P4I2 378 aa16.94■□□□□ 0.3
HMGA2-203ENST00000393578 COX8CQ7Z4L0 72 aa16.94■□□□□ 0.3
HMGA2-203ENST00000393578 RNF182Q8N6D2 247 aa16.94■□□□□ 0.3
HMGA2-203ENST00000393578 NUP35Q8NFH5 326 aa16.94■□□□□ 0.3
HMGA2-203ENST00000393578 TRAV8-2A0A0B4J237 113 aa16.93■□□□□ 0.3
HMGA2-203ENST00000393578 IGHV7-4-1A0A0J9YVY3 117 aa16.93■□□□□ 0.3
HMGA2-203ENST00000393578 RBAKDNA6NC62 111 aa16.93■□□□□ 0.3
HMGA2-203ENST00000393578 CDX1P47902 265 aaPredicted RBP16.93■□□□□ 0.3
HMGA2-203ENST00000393578 GFRA4Q9GZZ7 299 aa16.93■□□□□ 0.3
HMGA2-203ENST00000393578 HIGD1CA8MV81 97 aa16.93■□□□□ 0.3
HMGA2-203ENST00000393578 MT-ND6P03923 174 aa16.93■□□□□ 0.3
HMGA2-203ENST00000393578 FRMD6-AS1P0C7T7 363 aa16.93■□□□□ 0.3
HMGA2-203ENST00000393578 CT45A10P0DMU9 189 aa16.93■□□□□ 0.3
HMGA2-203ENST00000393578 UBE2E2Q96LR5 201 aa16.93■□□□□ 0.3
HMGA2-203ENST00000393578 PRR25Q96S07 402 aa16.93■□□□□ 0.3
HMGA2-203ENST00000393578 ASCL2Q99929 193 aa16.93■□□□□ 0.3
HMGA2-203ENST00000393578 VGLL1Q99990 258 aa16.93■□□□□ 0.3
HMGA2-203ENST00000393578 YAE1D1Q9NRH1 226 aa16.93■□□□□ 0.3
HMGA2-203ENST00000393578 FAM231BA6NCW3 169 aa16.92■□□□□ 0.3
HMGA2-203ENST00000393578 SNURFLB1AK76 121 aa16.92■□□□□ 0.3
HMGA2-203ENST00000393578 TM4SF20Q53R12 229 aa16.92■□□□□ 0.3
HMGA2-203ENST00000393578 RASL11AQ6T310 242 aa16.92■□□□□ 0.3
HMGA2-203ENST00000393578 MRPL18Q9H0U6 180 aaKnown RBP16.92■□□□□ 0.3
HMGA2-203ENST00000393578 LGALS1P09382 135 aaKnown RBP16.91■□□□□ 0.3
HMGA2-203ENST00000393578 MRPL54Q6P161 138 aaKnown RBP16.91■□□□□ 0.3
HMGA2-203ENST00000393578 C8orf49Q96NF6 230 aa16.91■□□□□ 0.3
HMGA2-203ENST00000393578 CRIP1P50238 77 aa16.91■□□□□ 0.3
HMGA2-203ENST00000393578 COA6Q5JTJ3 125 aaKnown RBP16.91■□□□□ 0.3
HMGA2-203ENST00000393578 WIPF2Q8TF74 440 aaPredicted RBP16.91■□□□□ 0.3
HMGA2-203ENST00000393578 C16orf92Q96LL3 132 aa16.91■□□□□ 0.3
HMGA2-203ENST00000393578 RHPN1-AS1Q9BWJ2 59 aa16.91■□□□□ 0.3
HMGA2-203ENST00000393578 UFC1Q9Y3C8 167 aa16.91■□□□□ 0.3
HMGA2-203ENST00000393578 AKAP9Q99996 3911 aa16.91■□□□□ 0.3
HMGA2-203ENST00000393578 XKRY2A2RUG3 117 aa16.9■□□□□ 0.3
HMGA2-203ENST00000393578 DNAJC9-AS1A6NH13 148 aa16.9■□□□□ 0.3
HMGA2-203ENST00000393578 PRAC2D3DTV9 90 aa16.9■□□□□ 0.3
HMGA2-203ENST00000393578 TMEM136Q6ZRR5 245 aa16.9■□□□□ 0.3
HMGA2-203ENST00000393578 OR2D3Q8NGH3 330 aa16.9■□□□□ 0.3
HMGA2-203ENST00000393578 SMPXQ9UHP9 88 aa16.9■□□□□ 0.3
HMGA2-203ENST00000393578 GTSF1Q8WW33 167 aa16.89■□□□□ 0.3
HMGA2-203ENST00000393578 SONP18583 2426 aaKnown RBP16.89■□□□□ 0.29
HMGA2-203ENST00000393578 S100A8P05109 93 aa16.89■□□□□ 0.29
HMGA2-203ENST00000393578 TCF24Q7RTU0 167 aa16.89■□□□□ 0.29
HMGA2-203ENST00000393578 ATP5L2Q7Z4Y8 100 aa16.89■□□□□ 0.29
HMGA2-203ENST00000393578 GFI1BQ5VTD9 330 aa16.88■□□□□ 0.29
HMGA2-203ENST00000393578 HIST3H2BBQ8N257 126 aa16.88■□□□□ 0.29
HMGA2-203ENST00000393578 Q8TAT8 98 aa16.88■□□□□ 0.29
HMGA2-203ENST00000393578 NDFIP1Q9BT67 221 aa16.88■□□□□ 0.29
HMGA2-203ENST00000393578 FAM181BA6NEQ2 426 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms