RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 DUSP14O95147 198 aaKnown RBP5.52□□□□□ -1.53
HMGB3P1-201ENST00000393368 NDUFB4O95168 129 aa5.52□□□□□ -1.53
HMGB3P1-201ENST00000393368 IFNA5P01569 189 aa5.52□□□□□ -1.53
HMGB3P1-201ENST00000393368 GIPP09681 153 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P1-201ENST00000393368 OR10J4P0C629 311 aa5.52□□□□□ -1.53
HMGB3P1-201ENST00000393368 CXCL2P19875 107 aa5.52□□□□□ -1.53
HMGB3P1-201ENST00000393368 FFAR4Q5NUL3 377 aa5.52□□□□□ -1.53
HMGB3P1-201ENST00000393368 ZNF705AQ6ZN79 300 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P1-201ENST00000393368 EXOC3-AS1Q8N2X6 119 aa5.52□□□□□ -1.53
HMGB3P1-201ENST00000393368 SCGB1C1Q8TD33 95 aa5.52□□□□□ -1.53
HMGB3P1-201ENST00000393368 PHLDA1Q8WV24 401 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P1-201ENST00000393368 CLUHP3Q96NS8 147 aa5.52□□□□□ -1.53
HMGB3P1-201ENST00000393368 SLC50A1Q9BRV3 221 aa5.52□□□□□ -1.53
HMGB3P1-201ENST00000393368 VPS13DQ5THJ4 4388 aa5.51□□□□□ -1.53
HMGB3P1-201ENST00000393368 FXYD6-FXYD2A0A087WZ82 144 aa5.51□□□□□ -1.53
HMGB3P1-201ENST00000393368 LOC100996750A0A140TA64 210 aa5.51□□□□□ -1.53
HMGB3P1-201ENST00000393368 RNF222A6NCQ9 220 aa5.51□□□□□ -1.53
HMGB3P1-201ENST00000393368 NUPR2A6NF83 97 aa5.51□□□□□ -1.53
HMGB3P1-201ENST00000393368 G3V3Q6 166 aa5.51□□□□□ -1.53
HMGB3P1-201ENST00000393368 BOLA2-SMG1P6H3BVE0 249 aa5.51□□□□□ -1.53
HMGB3P1-201ENST00000393368 HMGB3O15347 200 aaKnown RBP5.51□□□□□ -1.53
HMGB3P1-201ENST00000393368 HIST1H1EP10412 219 aaKnown RBP5.51□□□□□ -1.53
HMGB3P1-201ENST00000393368 RAB2AP61019 212 aa5.51□□□□□ -1.53
HMGB3P1-201ENST00000393368 ERCC8Q13216 396 aa5.51□□□□□ -1.53
HMGB3P1-201ENST00000393368 CEMP1Q6PRD7 247 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P1-201ENST00000393368 Q6ZTC4 211 aa5.51□□□□□ -1.53
HMGB3P1-201ENST00000393368 HSD17B11Q8NBQ5 300 aa5.51□□□□□ -1.53
HMGB3P1-201ENST00000393368 OR2T35Q8NGX2 323 aa5.51□□□□□ -1.53
HMGB3P1-201ENST00000393368 FXYD5Q96DB9 178 aa5.51□□□□□ -1.53
HMGB3P1-201ENST00000393368 ZNF503Q96F45 646 aa5.51□□□□□ -1.53
HMGB3P1-201ENST00000393368 PHYHIPLQ96FC7 376 aa5.51□□□□□ -1.53
HMGB3P1-201ENST00000393368 IGF2BP2-AS1Q96M15 143 aa5.51□□□□□ -1.53
HMGB3P1-201ENST00000393368 AQP10Q96PS8 301 aa5.51□□□□□ -1.53
HMGB3P1-201ENST00000393368 TMEM208Q9BTX3 173 aa5.51□□□□□ -1.53
HMGB3P1-201ENST00000393368 KRTAP4-6Q9BYQ5 205 aa5.51□□□□□ -1.53
HMGB3P1-201ENST00000393368 KCNIP2Q9NS61 270 aa5.51□□□□□ -1.53
HMGB3P1-201ENST00000393368 PPP1R14DQ9NXH3 145 aa5.51□□□□□ -1.53
HMGB3P1-201ENST00000393368 TMEM14CQ9P0S9 112 aa5.51□□□□□ -1.53
HMGB3P1-201ENST00000393368 RNF24Q9Y225 148 aa5.51□□□□□ -1.53
HMGB3P1-201ENST00000393368 FUT9Q9Y231 359 aa5.51□□□□□ -1.53
HMGB3P1-201ENST00000393368 GOLT1BQ9Y3E0 138 aa5.51□□□□□ -1.53
HMGB3P1-201ENST00000393368 TIMM9Q9Y5J7 89 aa5.51□□□□□ -1.53
HMGB3P1-201ENST00000393368 IGKV2-40A0A087WW87 121 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P1-201ENST00000393368 LOC102723971A0A1B0GUV8 181 aa5.5□□□□□ -1.53
HMGB3P1-201ENST00000393368 ZNF705GA8MUZ8 300 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P1-201ENST00000393368 OR7C2O60412 319 aa5.5□□□□□ -1.53
HMGB3P1-201ENST00000393368 INSP01308 110 aa5.5□□□□□ -1.53
HMGB3P1-201ENST00000393368 IGKV2D-40P01614 121 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P1-201ENST00000393368 CT45A10P0DMU9 189 aa5.5□□□□□ -1.53
HMGB3P1-201ENST00000393368 TNP2Q05952 138 aa5.5□□□□□ -1.53
HMGB3P1-201ENST00000393368 ICAM4Q14773 271 aa5.5□□□□□ -1.53
HMGB3P1-201ENST00000393368 GUK1Q16774 197 aa5.5□□□□□ -1.53
HMGB3P1-201ENST00000393368 C12orf74Q32Q52 190 aa5.5□□□□□ -1.53
HMGB3P1-201ENST00000393368 FAM122CQ6P4D5 195 aa5.5□□□□□ -1.53
HMGB3P1-201ENST00000393368 RPP25LQ8N5L8 163 aaKnown RBP5.5□□□□□ -1.53
HMGB3P1-201ENST00000393368 OR10J6PQ8NGY7 276 aa5.5□□□□□ -1.53
HMGB3P1-201ENST00000393368 PAXXQ9BUH6 204 aa5.5□□□□□ -1.53
HMGB3P1-201ENST00000393368 MRPL32Q9BYC8 188 aaKnown RBP5.5□□□□□ -1.53
HMGB3P1-201ENST00000393368 SH3BGRL3Q9H299 93 aa5.5□□□□□ -1.53
HMGB3P1-201ENST00000393368 OR51M1Q9H341 326 aa5.5□□□□□ -1.53
HMGB3P1-201ENST00000393368 EPPK1P58107 5090 aaKnown RBP5.49□□□□□ -1.53
HMGB3P1-201ENST00000393368 HBE1P02100 147 aa5.49□□□□□ -1.53
HMGB3P1-201ENST00000393368 NBEAP1P0C6P0 100 aa5.49□□□□□ -1.53
HMGB3P1-201ENST00000393368 HTN1P15515 57 aa5.49□□□□□ -1.53
HMGB3P1-201ENST00000393368 AZU1P20160 251 aa5.49□□□□□ -1.53
HMGB3P1-201ENST00000393368 ATP6V0CP27449 155 aa5.49□□□□□ -1.53
HMGB3P1-201ENST00000393368 UBE2L3P68036 154 aaKnown RBP5.49□□□□□ -1.53
HMGB3P1-201ENST00000393368 FAM222AQ5U5X8 452 aa5.49□□□□□ -1.53
HMGB3P1-201ENST00000393368 GFI1BQ5VTD9 330 aa5.49□□□□□ -1.53
HMGB3P1-201ENST00000393368 RPL7L1Q6DKI1 246 aaKnown RBP5.49□□□□□ -1.53
HMGB3P1-201ENST00000393368 RNF141Q8WVD5 230 aa5.49□□□□□ -1.53
HMGB3P1-201ENST00000393368 NEU1Q99519 415 aa5.49□□□□□ -1.53
HMGB3P1-201ENST00000393368 TNFSF18Q9UNG2 199 aa5.49□□□□□ -1.53
HMGB3P1-201ENST00000393368 YTHDF2Q9Y5A9 579 aaKnown RBP5.49□□□□□ -1.53
HMGB3P1-201ENST00000393368 KMT2AQ03164 3969 aa5.49□□□□□ -1.53
HMGB3P1-201ENST00000393368 IGLL5B9A064 214 aa5.48□□□□□ -1.53
HMGB3P1-201ENST00000393368 NPIPB6E9PJ23 425 aa5.48□□□□□ -1.53
HMGB3P1-201ENST00000393368 ARPC5O15511 151 aa5.48□□□□□ -1.53
HMGB3P1-201ENST00000393368 ZNF253O75346 499 aa5.48□□□□□ -1.53
HMGB3P1-201ENST00000393368 JTBO76095 146 aa5.48□□□□□ -1.53
HMGB3P1-201ENST00000393368 LY6G6CO95867 125 aa5.48□□□□□ -1.53
HMGB3P1-201ENST00000393368 M6PRP20645 277 aa5.48□□□□□ -1.53
HMGB3P1-201ENST00000393368 CDKN1BP46527 198 aa5.48□□□□□ -1.53
HMGB3P1-201ENST00000393368 RANP62826 216 aaKnown RBP5.48□□□□□ -1.53
HMGB3P1-201ENST00000393368 PDE6HQ13956 83 aa5.48□□□□□ -1.53
HMGB3P1-201ENST00000393368 ZNF266Q14584 549 aa5.48□□□□□ -1.53
HMGB3P1-201ENST00000393368 RRN3P1Q2M238 152 aa5.48□□□□□ -1.53
HMGB3P1-201ENST00000393368 ACOT6Q3I5F7 207 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P1-201ENST00000393368 INO80EQ8NBZ0 244 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P1-201ENST00000393368 OR10G4Q8NGN3 311 aa5.48□□□□□ -1.53
HMGB3P1-201ENST00000393368 OR10G9Q8NGN4 311 aa5.48□□□□□ -1.53
HMGB3P1-201ENST00000393368 OR10G7Q8NGN6 311 aa5.48□□□□□ -1.53
HMGB3P1-201ENST00000393368 Q8TAT8 98 aa5.48□□□□□ -1.53
HMGB3P1-201ENST00000393368 LINC00476Q8WZB0 136 aa5.48□□□□□ -1.53
HMGB3P1-201ENST00000393368 LINC01587Q99440 93 aa5.48□□□□□ -1.53
HMGB3P1-201ENST00000393368 VGLL1Q99990 258 aa5.48□□□□□ -1.53
HMGB3P1-201ENST00000393368 AAMDCQ9H7C9 122 aa5.48□□□□□ -1.53
HMGB3P1-201ENST00000393368 KLK5Q9Y337 293 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P1-201ENST00000393368 TRAV12-3A0A0B4J271 114 aa5.47□□□□□ -1.53
HMGB3P1-201ENST00000393368 PLAC8L1A1L4L8 177 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms